Phocoena phocoena (harbor porpoise): 136117907
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Entry
136117907 CDS
T11058
Symbol
TRDMT1
Name
(RefSeq) tRNA (cytosine(38)-C(5))-methyltransferase isoform X1
KO
K15336
tRNA (cytosine38-C5)-methyltransferase [EC:
2.1.1.204
]
Organism
pphc Phocoena phocoena (harbor porpoise)
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pphc03016
]
136117907 (TRDMT1)
Enzymes [BR:
pphc01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.204 tRNA (cytosine38-C5)-methyltransferase
136117907 (TRDMT1)
Transfer RNA biogenesis [BR:
pphc03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
136117907 (TRDMT1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
MTS
Motif
Other DBs
NCBI-GeneID:
136117907
NCBI-ProteinID:
XP_065726971
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All DBs
Position
2:complement(172628084..172677980)
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AA seq
391 aa
AA seq
DB search
MEPLRVLELYSGIGGMHQALRESCIPAQVVAAIDINTVANEVYKYNFPHTQLLAKTIEGI
TLEEFDRLSFNMILMSPPCQPFTRIGLQGDVTDPRTNSFLHILDILPRLQKLPKYILLEN
VKGFEVSSTRDLLIQTIGNCGFQYQEFLLSPTSLGIPNSRLRYFLIAKLQSVPFPFQAPG
QVLMEFPQTESEHPQKHAIDSEKKIEEKKIEPNICSDSSTQCSGKEAILFKLETAGEIDR
KRQQDSDLSVPMLRDFLEDDIDMNSYFLPPKSLLRYALLLDIVKPTSRRSTCFTKGYGRY
LEGTGSVLQTTEDVQVENIYRSLTNLSQEEKITRLLMLQLRFFTPKEIANLLGFPPEFGF
PEKTTVKQRYRLLGNSLNVHVVAQLIKILCE
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atggagcccctgcgggtcctggagctgtacagcggcattgggggtatgcaccaggcgctg
agagaaagctgtatacctgcacaagtggtggctgccattgatataaacactgtcgctaat
gaagtatacaagtataattttcctcacacacagttactggccaagacaattgaaggtatt
acactagaagagtttgacagattatctttcaatatgattttaatgagccctccctgtcag
ccattcacaagaatcggcctgcaaggtgatgtgactgatccaaggacaaatagcttctta
catattctagacattctcccaaggttacaaaaattaccaaagtatattcttttagaaaat
gttaaaggttttgaagtatcttctacaagagacctgttaatacaaacaataggaaattgt
ggctttcagtaccaagaatttctgttgtctccaacctctcttggcattccaaattcaagg
ctacggtatttccttattgcaaagcttcagtcagtgccgttcccttttcaagcccctggt
caggtactgatggagttcccccaaactgaatctgaacatccacaaaaacatgcgatagat
tcagaaaagaaaattgaagaaaagaaaattgagccaaatatttgctctgatagcagcaca
caatgttctggaaaagaagccattctttttaagcttgaaactgcaggagaaattgacagg
aaacgtcaacaggacagtgatctctctgtgccaatgctaagagattttcttgaagatgac
attgacatgaattcatactttttaccgccaaagtcattgctgcgatatgctcttctgtta
gacattgttaagcccacatccagaaggtccacgtgctttacgaaaggttacggacgctac
ctcgaagggacaggatctgtgttgcagactacagaggatgtgcaggttgagaatatctac
agatcccttaccaatttgtcacaagaagaaaagataacaagattgttaatgcttcaactt
cgatttttcactcctaaagaaatagcaaatctccttggatttcctccagagttcggattt
cctgagaagacaacagtcaaacagcgttatcgtctacttggaaatagtctcaatgtgcat
gtagtagctcaactaatcaaaatcctatgtgaataa
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