Phocoena phocoena (harbor porpoise): 136117921
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Entry
136117921 CDS
T11058
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein A1-like
KO
K12741
heterogeneous nuclear ribonucleoprotein A1/A3
Organism
pphc Phocoena phocoena (harbor porpoise)
Pathway
pphc03040
Spliceosome
pphc05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
136117921
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
136117921
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pphc03019
]
136117921
03041 Spliceosome [BR:
pphc03041
]
136117921
Messenger RNA biogenesis [BR:
pphc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
136117921
mRNA cycle factors
Common to processing body (P body) and stress granule
136117921
Spliceosome [BR:
pphc03041
]
Common components
Common spliceosomal components
hnRNP proteins
136117921
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
HnRNPA1_LC
RRM_7
RRM_PARP14_3
Nup35_RRM_2
PAS_PdeA
Motif
Other DBs
NCBI-GeneID:
136117921
NCBI-ProteinID:
XP_065727004
LinkDB
All DBs
Position
1:complement(136261220..136264520)
Genome browser
AA seq
366 aa
AA seq
DB search
MTPQGSDVPTPRTPQALWKEVWLEEGQRAQKKSIVDVSPSPASTAIVSKSESPKEPKQLR
KLFIGGLSFETTDDSLRSHCEQRGALTDCVVTRDPSTRRSRGFGVVTYATVEEVDAAMKA
RPHEVDGRVGEPKRAVSREDSQRPGAHLTVKKIFVGGIKGDTEEHHLRDYFEQYGKTEVI
EITTDRGSGKKRGFAFVTFDDPDSVDRIVIQKYHTVNGHNCEVRKALSQQETASASSSQR
GRSGSGNFGGGRGGGFGGNDSFGRGGNFSGRAGFGGSRSGGGYGGSGDGYNGFGNDGSNF
GGGGSYIDFGSYNNQSSNFGPMKGGNFGGRSSGPYGGGGQYFAKPPNQGGCGGSSSSSSC
GSGRRF
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgacgccacagggatcagatgtgcccacaccccgcactccccaagctctgtggaaagag
gtgtggctggaagagggccagagagctcagaagaaaagcatcgttgatgtctccccctcg
cccgcctccactgccatcgtgtctaagtcagagtcacccaaagagcccaaacagctgcgg
aagctcttcattggaggtttgagctttgaaacaactgatgacagtctgaggagccattgt
gagcagcggggagcgctcacagactgtgtggtaacgagggatccaagcaccaggcgctcc
agaggcttcggggttgtcacgtatgccactgtggaggaggtggatgcggccatgaaggca
aggccacacgaggtggatggaagagttggggaaccaaagagggccgtctcaagagaagat
tctcaaagacctggtgcccacttaactgtgaaaaagatttttgttggtggcattaaagga
gacactgaagaacatcacctaagagattattttgaacagtatgggaaaactgaagtgatt
gaaatcacgactgaccgaggcagtggcaaaaagagaggctttgctttcgtaacctttgat
gaccctgactctgtagacaggattgtcattcagaaataccacactgtgaatggccacaac
tgtgaagtaaggaaagccctatctcagcaagagacggctagtgcctcatccagccaaaga
ggtcgaagtggttctggaaactttggtggtggtcgtggagggggttttggtgggaatgac
agctttggtcgtggaggaaacttcagtggtcgagctggctttggtggcagccgcagtggt
ggtggatatggtggcagtggggatggctataatggatttggtaacgatggaagcaatttt
ggaggtggtggaagctacattgattttggcagttacaacaatcaatcttcaaattttgga
cccatgaaaggaggaaactttggaggcagaagttctggcccctatggtggtggaggccaa
tactttgccaaacccccaaaccaaggtggctgtggtggttccagtagcagcagtagctgt
ggcagtggcagaaggttttga
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