Phocoena phocoena (harbor porpoise): 136117986
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Entry
136117986 CDS
T11058
Symbol
NEO1
Name
(RefSeq) neogenin isoform X1
KO
K06766
neogenin
Organism
pphc Phocoena phocoena (harbor porpoise)
Pathway
pphc04350
TGF-beta signaling pathway
pphc04360
Axon guidance
pphc04514
Cell adhesion molecule (CAM) interaction
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
136117986 (NEO1)
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
136117986 (NEO1)
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
136117986 (NEO1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pphc04515
]
136117986 (NEO1)
Cell adhesion molecules [BR:
pphc04515
]
Immunoglobulin superfamily
DCC/UNC5 family
136117986 (NEO1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neogenin_C
fn3
I-set
Ig_3
Ig_2
ig
Pur_ac_phosph_N
FN3_DSCAM-DSCAML_C
Fn3_VIN3
V-set
Interfer-bind
C2-set_2
Ig_5
fn3_2
Tissue_fac
fn3_SORL1
Fn3_R-PTP-O
Ig_PDGFR_d4
TMEM154
EphA2_TM
TM_ErbB1
Herpes_UL74
FAM176
Motif
Other DBs
NCBI-GeneID:
136117986
NCBI-ProteinID:
XP_065727116
LinkDB
All DBs
Position
2:115045255..115284938
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AA seq
1481 aa
AA seq
DB search
MAAERRARRLLSTSSFWLCCLLLLERRASGAAAARSGSPPQSPGSSIRTFTPFYFLVEPV
DTLSIRGSSGILNCSAYSEPSPKIEWKKDGTFLNLVSDDRRQLLPDGSLFISNVVHSKHN
KPDEGYYQCVATVESLGTIVSRTAKLTVAGLPRFSSQPEPSSVYVGNSAILNCEVNADLV
PFVRWEQNRQPLLLDDRLTKLPSGTLVISNATEGDGGLYRCIVESGGPPKYSDEVELKVF
PDPEVTSNLVFLKQPSSLVRVIGQSAVLPCVASGLPTPTIRWMKNEEALDTESSERLVLL
AGGSLEISDVTEDDAGTYFCIADNGNETIEAQAELTVQAQPEFLKQPTNIYAHESMDIVF
ECEVTGKPTPTVKWVKNGDMVIPSDYFKIVKEHNLQVLGLVKSDEGFYQCIAENDVGNAQ
AGAQLIILEHDVAIPTLPPTSLTSATTDHLAPATTGPLPSAPRDVVASLVSTRFIKLTWR
TPASDPHGDNLTYSVFYTKEGIARERVENTSRPGEMQVTIQNLMPATVYIFRVMAQNKHG
SGESSAPLRVETQPEVQLPGPAPNIRAYATSPTSITVTWETPLSGNGEIQNYKLYYMEKG
TDKEQDVDVSSHSHTINGLKKYTEYSFRVVAYNKHGPGVSTQDVAVRTFSDVPSAAPQNL
SLEVRNSKSIVIHWQPPPPATQNGQITGYRVRYRKASRKSDVTETLVTGTQLSQLIEGLD
RGTEYNFRVAALTINGTGPATDWLSAETFESDLDETRVPEVPSSLHVRPLVTSIVVSWTP
PENQNIVVRGYAIGYGIGSPHAQTIKVDYKQRYYTIENLDPSSHYVITLKAFNNVGEGIP
LYESAVTRPHTDTSEVDLFVINAPYTPVPDPTPMMPPVGVQASILSHDTIRITWADNSLP
KHQKITDSRYYTVRWKTNIPANTKYKNANATTLSYLVTGLKPNTLYEFSVMVTKGRRSST
WSMTAHGTTFELVPTSPPKDVTVVSKEGKPRTIIVNWQPPSEANGKITGYIIYYSTDVNA
EIHDWVIEPVVGNRLTHQIQELTLDTPYYFKIQARNSKGMGPMSEAVQFRTPKADSSDKM
ANDQASGSAGKGSRLPDLGSDYKPPMSGSNSPHGSPTSPLDSNMLLVIIVSVGVITIVVV
VIIAVFCTRRTTSHQKKKRAACKSVNGSHKYKGNSKDVKPPDLWIHHERLELKPIDKSPD
PNPIMTDTPIPRNSQDITPVDNSMDSNIHQRRNSYRGHESEDSMSTLAGRRGMRPKMMMP
FDSQPPQPVISAHPIHSLDNPHHHFHSSSLASPARSHLYHPGSSWPIGTSMSLSDRANST
ESVRNTPSTDTMPASSSQTCCADHQDPEGATSSSYLASSQEEDSGQSLPTAHVRPSHPLK
SFAVPAIPPPGPPTYDPALPSTPLLSQQALNHHIHAVKTASIGTLGRSRPPMPVVVPSAP
EVQETTRMLEDSESSYEPDELTKEMAHLEGLMKDLNAITTA
NT seq
4446 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggagcggagagcccggcgactcctcagcacctcctccttctggctctgctgc
ctgctgctgctcgagcgccgggcgtcgggcgccgcggccgccaggagcggctccccgccg
caatccccaggatccagcattcggacattcactccattttattttttggtggaaccagtg
gataccctctcaattagaggctcttctggtatactaaactgttcagcgtattctgagcct
tctccaaaaattgaatggaaaaaagatggaacttttttaaacttagtgtcagacgatcga
cgccagcttctcccagatggatctttatttattagcaatgtggtgcattccaaacacaat
aaacctgatgaaggttattatcagtgtgtggccactgttgagagtcttggaactattgtc
agcagaacagccaagctcacagtagcaggtcttccaagattttccagccaaccagaacct
tcttcggtttatgttgggaacagtgcaattctgaattgtgaagttaatgcagatttggtc
ccatttgtgaggtgggaacagaacagacagcctcttcttctggatgatagacttaccaaa
cttccaagtggaacactagttatcagcaacgcaactgaaggagatgggggactctatcgc
tgcatagttgaaagtggtgggccaccaaagtatagtgatgaagttgaattaaaagttttt
ccagatcctgaggttacatcaaacttggtatttttgaaacaaccttcttccttagtcaga
gtcattggtcagagtgcagtgttaccatgtgttgcttcaggacttcctactccaaccatt
agatggatgaaaaatgaggaagcgcttgacacagaaagctctgaaagattggtattgctg
gcaggtggtagtctggagatcagtgacgtcaccgaggatgatgctggcacttatttttgt
atagctgataatggaaatgagacaattgaagctcaagcagagcttacagtacaagctcaa
cctgaattcctgaagcagcctactaatatatatgctcatgaatctatggatattgtattt
gaatgtgaagtgactgggaagccaactccaactgtgaagtgggtcaagaatggggatatg
gttatcccaagtgattactttaagattgtaaaggaacataatcttcaagttttgggtctg
gtgaaatcagatgaagggttctatcagtgcattgctgaaaatgatgttggaaatgcacaa
gctggagcccaactgataatccttgaacatgatgttgccatcccaacattacctcccact
tcactgaccagtgccactactgaccatctagcaccagccacaactggaccactgccttca
gctcctcgggatgtcgtggcctccttggtctctacccgcttcatcaaattgacatggcgg
acacctgcatcagatcctcatggggacaaccttacctactctgtcttctacaccaaggaa
gggattgctagggaacgtgttgaaaataccagtcgccccggagaaatgcaggtaaccatc
caaaatctaatgccagcgactgtgtacatctttagagttatggctcaaaataaacatggc
tccggagagagttcagctccactacgagtagaaacacagcctgaggttcagctccctggc
ccagcacctaacatccgagcatatgcaacttcacctacttccattactgtcacctgggaa
acaccattgtctggaaatggggaaattcagaattacaaactgtactacatggaaaaagga
actgataaagaacaggatgttgatgtttcaagtcactcccacaccattaacgggttgaaa
aaatatacagagtatagtttccgagtggtggcctacaataaacatggtcctggagtctcc
acacaagatgttgctgttcgaacattttcagatgttcccagtgctgctcctcagaatctg
tctttagaagtaagaaattcaaagagtattgtgattcactggcagccacctcctccagcc
acacaaaatgggcagatcactggctacagggttcgctaccgaaaggcctcccgaaagagc
gatgtcactgagacgttggtgactgggacacagctgtcacagttgattgaaggtcttgat
cgggggactgaatataatttccgagtggctgctctaacaatcaatggtacaggccctgct
actgactggctgtctgctgaaacttttgaaagtgacttagatgaaactcgtgtccccgaa
gtgcctagttctcttcacgtccgcccacttgtcactagcatcgtagtaagctggacacct
ccggagaatcagaacattgtggtcagaggttatgccattggttatggcattggcagccct
catgcccagaccataaaagtggactataaacagcgctattacaccatcgaaaatctggat
cccagctctcactatgtgattaccctgaaagcatttaacaatgtgggtgaaggtatcccc
ctctatgagagtgctgtgaccagacctcacacagacacttctgaagttgatttatttgtt
attaatgctccatacactccagtgccagatcctactcccatgatgccgccagtgggagtt
caggcttccattctgagtcatgacaccataaggattacatgggcagacaactcactgccc
aaacaccagaagattacagactcccgatactacacagtccgatggaaaaccaacatccca
gcaaacaccaagtataagaatgctaatgcaacgactttgagttatttggtgactggttta
aaaccaaatacactctatgaattctctgtgatggtgacgaaaggtcgaagatcaagcaca
tggagtatgacagcacatgggaccacttttgaattagttcctacttctccacccaaggat
gtgacagttgtgagtaaagagggaaaacctaggaccataattgtaaattggcagcctccc
tctgaagccaatggcaaaattacaggttacatcatatattacagtacggacgtgaatgca
gagatacacgactgggttattgagcctgttgtgggaaacaggctgactcaccagatacaa
gaattaacacttgacacaccatactacttcaaaatccaagctcggaactcaaagggcatg
gggcccatgtctgaagctgtccagttcagaacacccaaagcggactcctctgataaaatg
gctaatgatcaagcctcagggtctgcagggaaaggaagccgtctgccagacctaggatcc
gactacaaacctccgatgagcggcagtaacagccctcatggaagccccacctctcctcta
gacagtaacatgctgctggtcatcatcgtttccgttggcgtcatcaccatcgtggtggtc
gtgatcatcgctgtcttttgcaccaggcgtaccacttctcaccagaaaaagaaacgagct
gcttgcaaatcagtgaatggctcccacaagtacaaagggaactccaaggatgtaaaaccc
ccagacctctggatccatcatgagagactggagctgaaacccattgataagtctccagac
ccaaaccccatcatgactgatactccaattcctcgtaactctcaagatatcacaccggtt
gacaattccatggacagcaacatccatcaaaggcggaattcatatagagggcatgaatca
gaggacagcatgtctacactggctggaaggcggggaatgagaccaaaaatgatgatgccc
tttgactcccagccaccccagcctgtgattagtgcccatcccatccattccctcgataac
cctcaccatcatttccactccagcagcctcgcttctccagctcgcagtcatctctaccac
ccgggcagctcatggcccattggcacatccatgtccctttcagacagggccaattccaca
gaatctgttcgaaacacccccagcactgacaccatgccagcctcctcgtctcagacatgt
tgtgctgatcaccaggatcctgaaggtgctaccagctcctcttacttggccagctcccaa
gaggaagattcaggccagagtcttcctacagcccacgttcgcccttcccacccactgaag
agctttgctgtgccagcaatccctcccccaggtcctcccacctatgatccagcgttgcca
agcacaccgttactatcccagcaagctctaaaccatcacattcacgcggtgaagacggcc
tccattgggactttaggaaggagccggcctcctatgccagtggtggttcccagtgcccct
gaagtgcaggagaccacaaggatgctggaagactccgagagtagctatgaaccagatgag
ctgaccaaagagatggcccacctggaaggactgatgaaggacctaaatgccatcacgaca
gcatga
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integrated database retrieval system
