KEGG   Phocoena phocoena (harbor porpoise): 136118221
Entry
136118221         CDS       T11058                                 
Symbol
BLM
Name
(RefSeq) recQ-like DNA helicase BLM isoform X1
  KO
K10901  bloom syndrome protein [EC:5.6.2.4]
Organism
pphc  Phocoena phocoena (harbor porpoise)
Pathway
pphc03440  Homologous recombination
pphc03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:pphc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    136118221 (BLM)
   03460 Fanconi anemia pathway
    136118221 (BLM)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pphc03032]
    136118221 (BLM)
   03400 DNA repair and recombination proteins [BR:pphc03400]
    136118221 (BLM)
Enzymes [BR:pphc01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     136118221 (BLM)
DNA replication proteins [BR:pphc03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    136118221 (BLM)
DNA repair and recombination proteins [BR:pphc03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecQ family DNA helicases
     136118221 (BLM)
    Bloom's syndrome complex (BTR)
     136118221 (BLM)
   FA (Fanconi anemia) pathway
     136118221 (BLM)
SSDB
Motif
Pfam: BLM_N BDHCT_assoc DEAD BDHCT Helicase_C RecQ_Zn_bind RQC HRDC
Other DBs
NCBI-GeneID: 136118221
NCBI-ProteinID: XP_065727546
LinkDB
Position
2:complement(139796935..139860942)
AA seq 1430 aa
MAAVPQNNLQEQLERHSARKLNNKLSPSKPKSSGFTFKKKVSSANDVSVTSVSVAKAPVL
NDKDVNITEAFSFSEPFPHTTNQQTKINDFKNTPAGQQTKRVGSKPLLPNLSQVPQEVLC
TTQNTLLVKESRDATFKRLEFSSSSDSLITFNDWDDTDDFDTSGDSKAFVTPRQNHFIRV
STAQKSKKCKRNFLKAHLDKTNTVKTDLTPSSSESKQAFLTKKQKDDSEWLNSDVICIDD
DPNSEELINEDTQENHPLKTHLGEERDNCEKKKNLEEVELHSVEKSSCVELDEDDYDIDF
VPPSPEEGMTSTSSSSLKCSSVLKDLDTSDSKDGLSTSEDLSKSERMTTKQPNQETSTSY
DARQISLQQQLIRVMDHICELVDTIPDDKLKTLDCGNKLLQQRDIRRKLLAEADFNTSDA
SVLGSLWRCRPDLLGSSVKDMPSVSPPCAFPKGDSCPTGNSVKEFTFPNLPSNSISTGEC
LLTPTPGKTGFSATTKNLFERPLFNSHLQASFVSSNWAETPRVEKRNESSYFPGNVLTST
AVKDQNKHTASMNDLEREIQASYDIDNFDIDDFGDDDDDWENVMHNLAASKSSTAAYQPI
KEGRPVKSVSERISSSAKTDCLLASTAQNKNFSESIQNYTDKSEQSLASRDLKHERFQSL
NFPHTKEMMKIFHKKFGLHNFRTNQLEAINAALLGEDCFILMPTGGGKSLCYQLPACVSP
GVTIVISPLRSLIIDQVQKLTSFDIPATYLTGDKTDSEATNIYLQLSKKDPIIKLLYVTP
EKVCASNRLISTLENLYERKLLARFVIDEAHCVSQWGHDFRPDYKRMNMLRQKFPSVPVM
ALTATANPRVQKDILTQLKILRPQVFSMSFNRHNLKYYVLPKKPKKVAFDCLEWIRKHHP
HDSGIIYCLSRRECDTVADTLQKDGLAALAYHAGLSDSARDEVQHKWINQDGCQVICATI
AFGMGIDKPDVRFVIHASLPKSVEGYYQESGRAGRDGEISHCLLFYTYHDVTRLKRLILM
EKDGNHHTKETHFNNLYSMVHYCENITECRRIQLLAYFGENGFNPYFCKKYPDVSCDNCC
KTKNYKTRDVTDDVKNIVRFVQEHSSSQGTRNIKHVGPSGRFTMNMLVDIFLGSKSAKIQ
SGIFGKGSTYSRHNAERLFKKLILDRILDEDLYINANDQPIAYVMPGNKAQHVLNGHLKV
DFMETENSSSVKKQKALVTKVSQREEMVKKCLGELTEVCKSLGKVFGVHYFNIFNTVTLK
KLAESLSSDPEVLLQIDGVTEDKLEKYGAEVIPILQKYSEWTLPAEDDSSRRSPSSSRGT
GRNAPEELDEETPISSHYFANKTKNERKRKRMPASQRSKRRKTGFGGSKTKGGSSTCRRI
PSKTKPSSIFGPSSSLHGSQAASGVSRKLGIMAPPKPVNRPFLKPSYAFS
NT seq 4293 nt   +upstreamnt  +downstreamnt
atggctgctgttcctcaaaataatctacaggagcaactggaacgtcattcagccagaaaa
cttaataataaattaagtccttcaaaaccaaaatcttcaggtttcacttttaaaaagaaa
gtatcttcagccaacgatgtgtctgtaactagtgtgtcagtagcaaaagctcctgtgttg
aatgataaagatgttaatattactgaagccttttccttcagtgaaccttttccccacacc
acaaatcagcagacaaagatcaatgactttaaaaatactccagctggacagcaaactaag
agagttggttcaaaaccgttattgccaaatttgtcacaggttcctcaggaagttttatgc
actacccagaacacactgcttgtaaaggaatcccgtgatgctactttcaagagattagaa
tttagttcttcatcagattctcttattaccttcaatgattgggatgatacggatgacttt
gatacttctggagattcaaaagcatttgtgacaccacgccaaaaccacttcataagagta
agcactgctcagaaatcaaaaaagtgtaagaggaactttctaaaagcacaccttgataaa
acaaatacagtaaagactgatttgactccttcctcctctgagagcaagcaggcatttttg
actaagaaacagaaggatgactcagaatggttaaatagtgatgtgatttgcattgatgat
gaccccaattccgaagagcttataaatgaagatactcaggaaaatcatcctttaaaaact
catttgggagaggaaagagataattgtgaaaagaagaaaaacttggaagaagtggaatta
cattcagttgagaaatcttcatgtgttgagcttgatgaagatgattatgacatagatttt
gttccaccttctccagaagaaggaatgacttcaacctcttcatcctctttaaaatgctct
agtgtgttgaaggaccttgacacctctgacagcaaggatggtcttagcacatcagaagac
ttgtcaaaatctgagagaatgactacgaagcagcctaatcaagaaaccagcacaagctat
gatgctagacagataagtttacagcagcaacttattcgtgtgatggaccatatctgtgaa
ttagttgacactattcctgatgacaagctgaaaactttggattgtgggaacaaactgctc
cagcagcgggacataagaaggaaactcctagctgaagcagattttaatacgagtgatgcc
agtgttcttggctcattgtggagatgcaggcctgatttacttggtagctctgtgaaggat
atgccatctgtttccccaccttgtgcatttccaaagggtgattcctgtcctacagggaat
tctgttaaggagttcacttttccaaaccttccctcaaattccatttctactggggagtgt
ttactgactcctaccccaggaaagacaggattctcagccaccaccaagaatctctttgaa
cgaccgttattcaattcccatttacaggcgtcctttgtaagtagcaactgggctgaaaca
ccaagggtagaaaaaagaaatgaaagctcttatttcccaggaaatgttctcacaagcact
gctgtgaaagatcagaataaacacactgcctctatgaatgacttggaaagagaaatccag
gcttcctatgatattgacaattttgacatagatgactttggtgatgatgatgatgactgg
gaaaatgtgatgcataatttagcagccagcaagtcttccacagctgcctatcaacctatt
aaggaaggtcggcccgttaaatcagtatcagaaagaatttcttcttcagccaagacagac
tgtcttctggcatctactgctcagaataaaaacttctcagagtcaattcagaattacact
gacaagtcggagcaaagtttagcatccagagatctgaaacacgagcgtttccaaagtctc
aattttcctcatacaaaagaaatgatgaagatttttcataaaaaatttggcctgcataat
tttagaactaatcagctagaggcgatcaatgctgcactccttggtgaagactgttttatc
ttaatgcccactggaggtggtaaaagcttgtgttaccagctccctgcctgtgtttctccc
ggggtcactattgtcatttctcccttgagatcacttataatagatcaagtccaaaagctg
acttcctttgatattccggctacatatctgacaggtgataagactgactcagaagctaca
aatatttacctccagttatcaaaaaaagacccgattataaaacttctttatgttactcca
gagaaggtctgtgcaagtaacagactgatttctactctggagaatctgtatgagaggaag
ctcttggcacgttttgttattgatgaagcacattgtgtcagtcagtggggacatgatttt
cgtccagattacaaaagaatgaatatgcttcgccagaagtttccctctgttccagtgatg
gctcttactgccacagctaatcccagggtacagaaggacatcctcactcagctgaagatt
cttagacctcaggtgtttagcatgagcttcaacagacataatctaaaatactacgtgtta
cccaaaaaaccaaaaaaggtggcatttgattgcttagaatggatcagaaagcatcaccca
catgactcagggataatttactgcctttccaggcgagaatgtgacacagtggctgacaca
ttacagaaagatggtctcgctgctctggcgtatcatgctggcctcagtgactctgccaga
gatgaagtacagcacaagtggattaatcaggatggctgccaggttatctgtgcgaccatt
gcatttggaatggggattgacaaacctgatgtgcgatttgtgatccatgcatccctccct
aaatccgtggagggttactaccaagaatctggcagagctggaagagatggggaaatctct
cactgcctgctcttctatacctaccacgatgtgaccagactgaagaggcttatactaatg
gaaaaagacggaaaccatcatacgaaagagactcacttcaataatttgtatagtatggta
cattactgtgaaaatataacagaatgcaggagaatacagcttttggcttactttggcgaa
aatggatttaatccttatttttgtaagaaatacccagatgtttcttgtgataattgctgt
aaaacaaagaattataagacaagagatgtgactgatgatgtaaaaaatattgtaagattt
gttcaagaacacagttcatcacaaggaacaagaaatataaaacatgtaggtccttctggg
agatttactatgaatatgctggtcgacattttcttggggagtaagagtgcaaaaattcag
tcaggaatatttggaaagggatccacttattcaagacacaatgctgaaagactttttaaa
aagctgatacttgacaggattttggatgaagacttatatatcaatgccaatgatcaacca
attgcatatgtgatgcctggaaataaagcccaacatgtactaaatgggcatttaaaggta
gactttatggaaacggaaaattccagcagtgtgaaaaaacaaaaagctttagtgacaaag
gtatctcagagggaagagatggttaagaaatgtcttggagagcttacggaagtctgcaaa
tctctgggaaaagtttttggtgtccattactttaatatttttaatactgtcactctcaag
aagcttgcagaatctttatcgtctgatcctgaggttttgcttcaaattgatggtgttact
gaagacaaactggaaaaatatggtgcagaagtgattccaatattacagaaatattctgag
tggacattaccagctgaggacgattcctcacggagaagcccctccagcagcagaggcact
ggaagaaatgcccctgaggagctggatgaggaaacacccatatcttctcactactttgca
aataaaaccaaaaacgaaagaaagaggaaaaggatgccagcctcccaaaggtctaagagg
agaaaaactggtttcggtggttccaagacaaaaggggggtccagcacatgcagaaggata
ccttctaaaactaaaccctccagcatatttggacccagttcatctttgcatggctctcaa
gcggcatcaggagtcagtagaaaattggggattatggctccaccaaagcctgtaaatagg
ccgtttcttaagccttcatatgcattttcataa

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