Phocoena phocoena (harbor porpoise): 136118310
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Entry
136118310 CDS
T11058
Symbol
NOVA1
Name
(RefSeq) RNA-binding protein Nova-1 isoform X1
KO
K14944
RNA-binding protein Nova
Organism
pphc Phocoena phocoena (harbor porpoise)
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pphc03041
]
136118310 (NOVA1)
Spliceosome [BR:
pphc03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
136118310 (NOVA1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH-I_KHDC4-BBP
KH_2
KH_KhpA-B
KH_Vigilin
Motif
Other DBs
NCBI-GeneID:
136118310
NCBI-ProteinID:
XP_065727687
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All DBs
Position
2:71223601..71365803
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AA seq
507 aa
AA seq
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MMAAAPIQQNGTHTGVPIDLDPPDSRKRPLEAPPEAGSTKRTNTGEDGQYFLKVLIPSYA
AGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNAVHGFIAEKI
REMPQNVAKTEPVSILQPQTTVNPDRIKQTLPSSPTTTKSSPSDPMTTSRANQVKIIVPN
STAGLIIGKGGATVKAIMEQSGAWVQLSQKPDGINLQERVVTVSGEPEQNRKAVELIIQK
IQEDPQSGSCLNISYANVTGPVANSNPTGSPYANTAEVLPTAAAAAGLLGHANLAGVAAF
PAVLSGFTGNDLVAITSALNTLASYGYNLNTLGLGLSQAAATGALAAAAASANPAAAAAN
LLATYASEASASGSTAGGTAGTFALGSLAAATAATNGYFGAASPLAASAILGTEKSTDGS
KDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTPAA
TQAAQYLITQRITYEQGVRAANPQKVG
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgatggcggcagctcccatccagcagaacgggacccacactggggttcccatagacctg
gacccgccggactcgcggaaaaggccgctggaagccccccctgaagccggcagcaccaag
aggaccaatacgggcgaagacggccagtattttctaaaggttctcatacctagttatgct
gctggatctataattgggaagggaggacagacaattgttcagttgcaaaaagaaactgga
gccaccatcaagctgtctaagtccaaagatttttacccaggtactactgaacgagtgtgc
ttgatccagggaacagttgaagcactgaatgcagttcatggattcattgcagaaaaaatt
cgagaaatgccccaaaatgtggccaagacagaaccagtcagcattctacaaccccagacc
accgttaacccagatcgcatcaaacaaacattgccatcttccccaactaccaccaagtcc
tctccatctgatcccatgaccacctccagagctaatcaggtaaagattatagttcccaac
agcacagcaggtctgataatagggaagggaggtgctactgtgaaggctataatggagcag
tcaggggcttgggtgcagctttcccagaaacctgatgggatcaacctgcaagagagggtt
gtcactgtgagtggagaacctgaacaaaaccgaaaagctgttgaacttatcatccagaag
atacaagaggatccacagagtggcagctgtctcaatatcagttatgccaatgttacaggt
ccggtggcaaattccaatccaacgggatctccttatgcaaacactgctgaagttctacca
accgctgcagcagccgcagggctattaggacatgctaaccttgctggcgttgcagccttt
ccagcagttttatctggcttcacaggcaacgacctggtggccatcacctctgcacttaat
acattagccagctatggatacaatctcaacacattaggtttaggtctcagtcaagcagca
gcaacaggggctttggctgcagcagctgccagtgccaatccagcggcagcagcagccaat
ttgttggccacctatgccagtgaagcctcagccagtggcagcacagctggtggtacggcg
gggacattcgcattaggtagcctggctgctgctactgctgcaaccaatggatactttgga
gctgcttctcccctagctgccagtgccattctaggaacagaaaaatccacagatggatca
aaggatgtagttgaaatagcagtgccagaaaacttagttggtgcaatacttggcaaagga
gggaaaacattagtggaataccaggagttgactggtgcaaggatacagatctccaaaaaa
ggagaattcgtacctggcacaaggaatcggaaggtgaccattactggaacaccagctgca
acacaggctgctcaatatttaattacacaaaggatcacatatgagcaaggagttcgggcc
gccaatcctcagaaagtgggttga
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