Phocoena phocoena (harbor porpoise): 136118516
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Entry
136118516 CDS
T11058
Symbol
RGMA
Name
(RefSeq) repulsive guidance molecule A
KO
K23096
repulsive guidance molecule A
Organism
pphc Phocoena phocoena (harbor porpoise)
Pathway
pphc04350
TGF-beta signaling pathway
pphc04360
Axon guidance
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
136118516 (RGMA)
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
136118516 (RGMA)
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Gene cluster
GFIT
Motif
Pfam:
RGM_N
RGM_C
C8-3_MUC4
Motif
Other DBs
NCBI-GeneID:
136118516
NCBI-ProteinID:
XP_065727833
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All DBs
Position
2:132832885..132875474
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AA seq
454 aa
AA seq
DB search
MQPPRERLVVTGRAGWMGMGRGAGPSALGFWPTFAFLLCSFPAATSSCKILKCNSEFWSA
TAGSHAPAPDDAPEFCAALRTYALCTRRTARTCRGDLAYHSAVHGIEDLMSQHNCSKDGP
TSQPHLRTLPPPPGDSQERSDSPEICHYEKSFHNRAAAPNYTHCGLFGDPHLRTFTDRFQ
TCKVQGAWPLIDNNYLNVQVTNTPVLPGSAATATSKLTIIFKNFQECVDQKVYQAEMDEL
PAAFADGSKNGGDKHGANSLKITEKVSGQHVEIQAKYIGTTIVVRQVGGYLTFAVRMPEE
VVNAVEDRDSQGLYLCLRGCPLNQQIDFQAFRAGAESPGAHRLPAASPAPSAPDTFPYET
AVAKCKEKLPVEDLYYQACVFDLLTTGDVNFTLAAYYALEDVKMLHSNKDKLHLYERTRE
PPGRAAAAGLPPAPWPLLGSLLLLPLLPVLLEAT
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgcagccgccaagggagaggctagtggtaacaggccgagctggatggatgggtatgggg
agaggggcaggaccttcagccctgggattctggccgaccttcgccttccttctctgcagc
ttccccgcagccacctcctcgtgcaagatcctcaagtgcaactctgagttctggagcgcc
acggcgggcagccacgcaccggccccggacgacgcccctgagttctgcgcggcgctgcgc
acctatgccctgtgcacgcggcgcacagcccgcacctgccggggggacctggcctaccac
tctgccgtccatggcatcgaggacctcatgagccagcacaactgctccaaggatggcccc
acgtcgcagccgcacctacgcacgctgccgccgccaccgggggacagccaggaacgctcg
gacagccccgagatctgccactacgagaagagcttccacaatcgcgcggccgcccccaac
tacacgcactgcggcctcttcggagacccgcacctccggactttcacagaccgtttccag
acctgcaaggtgcagggcgcctggccgctcatcgacaataattacctaaacgtgcaggtc
accaacacaccggtgctgcctggctcagccgccaccgccaccagcaagctcaccatcatc
ttcaagaacttccaggagtgcgtggaccagaaggtgtaccaggccgagatggacgagctc
cctgccgccttcgccgacggctccaagaacggcggcgacaagcacggggccaacagcctg
aagatcaccgagaaggtgtcgggccagcacgtggagatccaggccaagtacatcggcacc
accatcgtggtccgccaggtgggtggctacctgactttcgcggtccgcatgcccgaggag
gtagtcaacgccgtggaagaccgggacagccagggcctctacctctgcctgaggggctgc
ccactcaaccagcagatcgacttccaggccttccgagccggcgccgagagccccggcgcc
cacaggctaccagccgccagccccgccccctcagcccccgacaccttcccatacgagacg
gccgtggccaagtgcaaggagaagctgcccgtggaggacctctactaccaggcctgcgtc
ttcgacctgctcaccacaggagacgtgaacttcacgctggccgcctactacgccctggag
gacgtcaagatgctccactccaacaaggacaagctgcacctgtacgagaggactcgggag
ccgccgggccgggcggccgccgcagggctgcccccggccccctggcccctcctcggcagc
cttctactcctgcccctgcttcctgtgctgctggaggccacctag
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