Phocoena phocoena (harbor porpoise): 136118545
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Entry
136118545 CDS
T11058
Symbol
NVL
Name
(RefSeq) nuclear valosin-containing protein-like
KO
K14571
ribosome biogenesis ATPase
Organism
pphc Phocoena phocoena (harbor porpoise)
Pathway
pphc03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
136118545 (NVL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pphc03009
]
136118545 (NVL)
Ribosome biogenesis [BR:
pphc03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
136118545 (NVL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Nucleolin_bd
AAA_lid_3
RuvB_N
AAA_16
AAA_5
AAA_14
AAA_22
TIP49
AAA_2
AAA_28
AAA_33
nSTAND3
NPHP3_N
Mg_chelatase
RNA_helicase
AAA_17
AAA_18
ABC_tran
Zeta_toxin
NACHT
nSTAND_NTPase5
AAA_3
IstB_IS21
Rad17
NB-ARC
TsaE
Vps4_C
Viral_helicase1
ATPase
Sigma54_activat
Parvo_NS1
Sigma54_activ_2
DUF3540
DUF4473
Motif
Other DBs
NCBI-GeneID:
136118545
NCBI-ProteinID:
XP_065727854
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All DBs
Position
1:165227114..165330686
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AA seq
856 aa
AA seq
DB search
MKPRPARFVDNKLKQRVIQYLTSNRCGKYVDTGVLASDLQRMYSIDYGRRKRNAFRIQVE
KVFSIISSEKELKDLPELEDEHLAKRARHGEEDNEYNESYSDDDSNMEDYPDPQSANQMN
SSLLSLYRKGNPDSVSSTPDMERRETTISTPRITSKTGSIPLKSPARGSEGGWFIDKIPG
GKKDSFFSDLSDEKSNDKNPISEIENSKDSSLLESNKKRKGRLNSKRGKRKKEDLQEVDG
EIEAVLQKKAKARGLELQISKVKFEDVGGNDTTLKEVCKMLIHMRHPEVYHHLGVIPPRG
VLLHGPPGCGKTLLAHAIAGELDLPILKVAATEIVSGVSGESEQKLRELFEQAVSNAPCI
LFIDEIDAITPKREVASKDMERRIVAQLLTCMDDLNDMAATARVLVIGATNRPDSLDPAL
RRAGRFDREICLGIPDEASRERILQTLCRKVRLAETFHFRHLAHLTPGFVGADLMALCRE
AAMCAVNRVLMKLQEQQQKNPEIEGLPSEGGQEERIGTEPTSKTQDELQRLLGLLRNQDP
LSEEQLQGLCLELNDFIVALSSVQPSAKREGFVTVPNVTWADIGALEDIREELTMAILAP
VRNPDQFKALGLETPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESE
RAVRQVFQRAKNSAPCVIFFDEVDALCPRRSVRETGASVRVVNQLLTEMDGLETRQQVFI
MAATNRPDIIDPAILRPGRLDKTLFVGLPPPADRLAILKTITKNGTKPPLDADVNLEAVA
GDLRCDCYTGADLSALVREASICALKQEMARQKSGSEKGELKISHKHFEEAFKKVKSSVS
KEDQAMYEALQWSLSR
NT seq
2571 nt
NT seq
+upstream
nt +downstream
nt
atgaagcccaggcccgcgaggtttgtggataataagctgaagcagcgcgtcatccagtac
ctcaccagtaaccgatgtggcaaatatgtggacactggagtcttagcatccgatttacaa
agaatgtacagtatagactatggtcgaagaaaaagaaatgcttttaggattcaggtagaa
aaagtatttagcataattagtagtgagaaggaacttaaggatctaccagaattagaagat
gaacatctggctaaaagagcaagacacggtgaagaggataatgagtataatgaaagctat
tctgatgatgattcaaatatggaagattacccagatccacagtcagcaaatcagatgaac
agttccctgctctccttatatcggaaaggaaatcctgattctgtttcaagtactcctgac
atggagcgaagagaaaccacgatttcaacaccacggataacttccaaaacaggctccatt
cctttgaagtcccctgccagaggttctgaaggaggatggtttattgacaaaatcccgggt
gggaagaaagacagttttttctcagacctatcagatgagaaaagtaatgataagaatccg
atctctgagatagagaattcaaaagattcttctcttctggagagtaataaaaaaagaaaa
ggcaggctaaacagcaaaagaggcaaaaggaagaaagaagatcttcaggaagtagatgga
gaaatagaggctgtcctgcaaaagaaagctaaagccagagggctagaattgcagatctcc
aaggtgaagtttgaagatgttggaggcaatgatacgacattaaaagaggtctgcaagatg
ctcatacacatgcgtcacccagaggtgtaccaccacctgggcgtcatacccccacgcgga
gttcttcttcatggaccacctggctgtgggaagacgttgcttgcccatgcaattgctggg
gaacttgaccttccaatattgaaagtagctgctacagagattgtatctggagtatctgga
gaatcggaacagaagctgagagagctatttgaacaagctgtgtcaaatgcaccatgtatc
ctttttattgatgaaattgatgctattacccccaaaagagaagttgcttcaaaagatatg
gaacgaagaattgtagcccagctcctaacctgcatggacgatctgaatgacatggccgct
acagctcgggtcctagtcatcggagctactaaccgaccagactccttagaccctgctttg
agacgtgcaggaaggttcgaccgagagatatgcctaggtatcccagatgaagcatccagg
gaaagaatacttcaaactttgtgcagaaaagtaagacttgccgaaacttttcattttcgt
cacttagcacacctaacaccgggctttgttggtgctgacctgatggcactctgccgagag
gcagccatgtgtgcagtcaacagggtcttaatgaagctgcaggagcagcagcagaagaat
cctgagattgaaggtttgccctctgaaggaggccaggaagaaaggattggaactgaaccc
acttctaaaacacaggatgaattgcaaaggctcttggggttgctgaggaaccaagatccc
ctctcagaggagcagctgcaagggctgtgccttgagttgaatgatttcattgttgctcta
tcctctgtccaaccctctgctaaaagggaaggctttgtcactgtccctaatgtgacatgg
gcggatattggtgccctggaagacattagagaggagctcaccatggcaatattggcaccg
gtacgtaacccagatcagttcaaagctcttgggttggagactccagctggagtcctcctt
gctggtccccctggctgtgggaaaactctgctggcaaaggctgttgcaaatgagtctggg
ttaaattttatatctgtcaaggggcctgagttactaaatatgtatgttggtgaaagcgag
cgtgctgtgcgacaggtttttcagcgagccaagaattcagcaccctgcgtgatattcttt
gatgaagtggatgccttatgtcctcgaagatcagtccgagagacaggggcaagtgtccgg
gtggtaaatcagctacttacagagatggatggtctggaaacacgtcagcaggtttttatt
atggcagccactaacagaccagatatcattgaccctgcaatcctgcgcccaggccgcctg
gacaaaacactctttgtgggtttgccacccccagcagatcgtctcgccatcttaaaaact
atcacaaaaaatggcaccaaacccccactggatgcagatgtaaatttggaagcagttgct
ggtgaccttcgctgtgattgctatacgggtgcagatctctctgctttggtacgggaggct
tctatctgtgccttgaagcaggaaatggcaagacagaagagtgggagtgaaaaaggtgaa
ctcaagattagtcacaagcactttgaagaagctttcaagaaagtaaagtcatctgtatca
aaagaggatcaagcgatgtatgaagctctgcagtggtccctcagccggtga
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