Phocoena phocoena (harbor porpoise): 136118642
Help
Entry
136118642 CDS
T11058
Symbol
SIX6
Name
(RefSeq) homeobox protein SIX6
KO
K19473
homeobox protein SIX3/6
Organism
pphc Phocoena phocoena (harbor porpoise)
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pphc03000
]
136118642 (SIX6)
Transcription factors [BR:
pphc03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
136118642 (SIX6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SIX1_SD
Homeodomain
Homeobox_KN
FAM199X
HTH_3
Motif
Other DBs
NCBI-GeneID:
136118642
NCBI-ProteinID:
XP_065727948
LinkDB
All DBs
Position
2:complement(40467777..40469669)
Genome browser
AA seq
246 aa
AA seq
DB search
MFQLPILNFSPQQVAGVCETLEESGDVERLGRFLWSLPVAPAACEALNKNESVLRARAIV
AFHGGNYRELYHILENHKFTKESHAKLQALWLEAHYQEAEKLRGRPLGPVDKYRVRKKFP
LPRTIWDGEQKTHCFKERTRHLLREWYLQDPYPNPSKKRELAQATGLTPTQVGNWFKNRR
QRDRAAAAKNRLQQQVLSQGPGRALRAEEEGTPEVLGTAASPAASLSSKAATSAISITSS
DSECDI
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgttccagctgcctatcttgaatttcagtccccagcaagtggccggggtatgcgagact
ctagaggagagcggcgacgtggagcgcctgggtcgcttcctctggtcgctgcctgtggcc
cctgcggcctgcgaggcgctcaacaagaatgaatccgtgctgcgcgcgagagccatcgtg
gccttccatggtggcaactaccgcgagctctaccatatcctggaaaaccacaagttcacc
aaggagtcacacgccaaactgcaggcgctgtggctcgaagcgcattaccaggaggctgag
aagctgcgaggacggcccttggggccagtggacaagtaccgcgtgaggaagaagttcccg
ctgccgcgcaccatctgggatggcgaacagaagacacactgcttcaaggagcgcacgcgg
cacctgcttcgggaatggtacctgcaggacccataccctaaccccagcaaaaagcgtgag
ctcgcccaggcaaccggactgacccctacgcaggtgggcaactggttcaaaaaccgccga
caaagggaccgggcggctgcagccaagaacaggcttcagcagcaggttctgtcgcagggc
cccggccgggcgctaagggccgaggaagagggcacgcccgaggtgctgggcaccgccgcc
agcccggccgccagcctgtccagcaaggcagccacttcggccatctccatcacgtccagc
gacagcgagtgcgacatctga
DBGET
integrated database retrieval system
