Phocoena phocoena (harbor porpoise): 136118675
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Entry
136118675 CDS
T11058
Symbol
RORC
Name
(RefSeq) nuclear receptor ROR-gamma isoform X1
KO
K08534
RAR-related orphan receptor gamma
Organism
pphc Phocoena phocoena (harbor porpoise)
Pathway
pphc04659
Th17 cell differentiation
pphc04710
Circadian rhythm
pphc05321
Inflammatory bowel disease
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09150 Organismal Systems
09151 Immune system
04659 Th17 cell differentiation
136118675 (RORC)
09159 Environmental adaptation
04710 Circadian rhythm
136118675 (RORC)
09160 Human Diseases
09163 Immune disease
05321 Inflammatory bowel disease
136118675 (RORC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pphc03000
]
136118675 (RORC)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
pphc03310
]
136118675 (RORC)
Transcription factors [BR:
pphc03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
136118675 (RORC)
Nuclear receptors [BR:
pphc03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
136118675 (RORC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
136118675
NCBI-ProteinID:
XP_065728372
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All DBs
Position
1:complement(109947681..109970359)
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AA seq
506 aa
AA seq
DB search
MDRAPQRHHRASQELLAAKKTHTSQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQ
CNVAYSCTRQQNCPIDRTSRNRCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLHAEVQK
QLQQRQQQQREQAAKTPPAGAQGADPLACTLGLPDGQLPLGSSPDLPEASACPPSLLRAP
GCGPSYSNSLAKAGLNGASYHLEYSPERGKTEGRENCYGTGSQPTPDRRGLHFEDPRHPG
LGEPGRGPDSYFSPSFRSTPEAPYASLTEIEHLVQNVCKSYRETCQLRLEDLLGQRSTVF
SREEVAGYQRKSMWEMWERCAHRLTEAIQYVVEFAKRLSGFMELCQNDQIVLLKAGAMEV
VLVRMCRAYNADNHTVFFEGCSELISSIFDFSHSLSALHFSEDEIALYTALVLINANRPG
LQEKRKVEQLQYSLELAFHHHLCKTHRHGILAKLPPKGKLRSLCSQHVEKLQTFQHLHPI
VVQAAFPPLYKELFSTEIESPEGLSK
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atggacagagccccacagagacaccaccgagcctcgcaggagctgctggctgcaaagaag
acccacacctcacaaattgaagtgatcccttgcaaaatctgtggggacaaatcatctggg
atccattacggggttatcacctgtgaggggtgcaagggtttcttccgccggagccagcag
tgtaacgtggcctactcctgcacccgtcagcagaactgccccattgaccgcactagccga
aaccgatgccagcactgccgcctgcagaaatgcctggccctgggcatgtcccgagacgct
gtcaagtttggccgcatgtccaagaagcaaagggacagcctacatgctgaggtgcagaaa
caactgcaacagcggcaacagcagcaaagggaacaagcggccaagacccctcctgcagga
gcccaaggagcagaccccctcgcctgcaccttggggctcccagatgggcagctgcccctg
ggctcctcgcctgacctgccggaggcctcagcctgtccccccagtctcctgagagcccca
ggctgcgggccctcctactccaacagcttggccaaggctgggctcaacggggcctcgtac
cacctggaatacagccctgagcggggcaagaccgagggcagagagaactgctatggcaca
ggcagccagccgacccctgacaggcgtggactccacttcgaggaccccaggcaccctggg
cttggggaaccaggacggggcccggacagctacttcagccccagtttccgcagcacccca
gaggcgccttatgcctccctgacggagattgagcatctggtgcagaacgtttgtaagtcc
taccgagagacgtgtcagctgcggctggaggacctgctcggacagcgctccaccgtcttc
tcccgagaggaggtggccggctaccagaggaagtcaatgtgggagatgtgggaacgctgt
gcccaccgcctcaccgaggccattcagtacgtggtggagttcgctaagaggctctcgggc
tttatggagctctgccagaatgaccagatcgtgctactcaaagcaggagccatggaagta
gtgctggtcaggatgtgccgggcctacaatgctgacaaccatacagtcttttttgaaggc
tgcagcgagctcatcagctccatctttgacttctcccactccctgagtgccttgcatttt
tccgaggacgagattgccctctacacggccctcgtcctcatcaacgccaaccggccaggg
ctccaagagaaaaggaaagtagaacagctgcagtacagtctggagctggcctttcatcat
catctctgcaagactcatcgccacggcatcctggcaaagctgccacccaaggggaagctt
cggagcctgtgtagccagcatgtggaaaagctgcaaaccttccagcatctccaccccatc
gtggtccaagctgctttccctccactctacaaggaactcttcagcactgaaatcgagtca
cctgaggggctgtccaagtga
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