Phocoena phocoena (harbor porpoise): 136118800
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Entry
136118800 CDS
T11058
Symbol
LINGO1
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
pphc Phocoena phocoena (harbor porpoise)
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pphc04131
]
136118800 (LINGO1)
Membrane trafficking [BR:
pphc04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
136118800 (LINGO1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
Ig_3
ig
Ig_2
LRR_9
LRR_Zer-1
LRRNT
V-set
Motif
Other DBs
NCBI-GeneID:
136118800
NCBI-ProteinID:
XP_065728176
LinkDB
All DBs
Position
2:117486559..117488453
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AA seq
614 aa
AA seq
DB search
MLAGGVRSMPSPLLACWQPILLLVLGSVLSGSATGCPPRCECSAQDRAVLCHRKRFVAVP
EGIPTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGL
RSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRA
FSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEI
SHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPINTIEGSM
LHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESAFHSVGNLETLIL
DSNPLACDCRLLWVFRRRWRLNFNRQQPTCATPEFVQGKEFKDFPDVLLPNYFTCRRARI
RDRKAQQVFVDEGHTVQFVCRADGDPPPAILWLSPRKHLVSAKSNGRLTVFPDGTLEVRY
AQVQDNGTYLCIAANAGGNDSMPAHLHVRSYSPDWPHQPNKTFAFISNQPGEGEANSTRA
TVPFPFDIKTLIIATTMGFISFLGVVLFCLVLLFLWSRGKGNTKHNIEIEYVPRKSDAGI
SSADAPRKFNMKMI
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atgctggcggggggcgtgaggagcatgcccagccccctcctggcctgctggcagcccatc
ctcctgctggtgctgggctcggtgctgtcaggctcagccacaggctgcccgccccgctgc
gagtgctccgcccaggaccgcgctgtgctctgccaccgcaagcgctttgtggcggtgcct
gagggcatccccactgagacccgcctgctggacctgggcaagaaccgcatcaaaacgctc
aaccaggacgagtttgccagcttcccgcacctggaggagctggagctcaatgagaacatc
gtgagcgccgtggagcctggtgccttcaacaacctcttcaacctccggacgctggggctc
cgcagcaatcgcctgaagctcatccccctgggcgtcttcaccggcctcagtaacctgacc
aagctggacatcagcgagaacaagatcgtcatcctgctggactacatgttccaggacctg
tacaacctcaagtcactggaagtcggcgacaacgacctcgtctacatctcccaccgagcc
ttcagcggcctcaacagcctggagcagctgacgctggagaaatgcaacctgacctccatc
cccaccgaggcgctctcccacctgcacggtctcatcgtcctgcggctccggcacctcaac
atcaatgccatccgggactattccttcaagaggttgtaccggctcaaggtcttggagatc
tctcactggccctacttggacaccatgactcccaactgtctctacggcctcaacctgacg
tccctgtctatcacgcactgcaacctgactgctgtgccctacctggcggtgcgccacctg
gtctatctccgcttcctcaacctctcctacaaccccatcaacaccattgagggctccatg
ttgcatgagctgctaaggctgcaggagatccagctggtgggtgggcagctggccgtggtg
gagccctacgccttccgcggcctcaactacctgcgcgtgctcaacgtctccggcaaccag
ctgaccacactggaggagtcggccttccactcggtgggcaacctggagacgctcatcctg
gactccaacccactggcctgcgactgccggctcctgtgggtgttccggcgccgctggcgg
ctcaacttcaaccggcagcagcccacgtgtgccacgcccgagttcgtccagggcaaggag
ttcaaggacttccctgatgtgctcctgcccaactacttcacctgccgccgtgcccgcatc
cgggaccgcaaggcccagcaggtgtttgtggatgagggccacacagtgcagtttgtgtgc
cgggcagatggcgacccgccgcccgccatcctctggctctcgccccgcaagcacctggtc
tcggccaagagcaacgggcggctcacggtcttccccgatggcacgctggaggtgcgctac
gcccaggtacaggacaacggcacttacctgtgcatcgcggccaacgcgggcggcaacgat
tccatgcctgcccacctgcacgtgcgcagctactcgcccgactggccccatcagcccaac
aagaccttcgccttcatctccaaccagccgggcgagggagaggccaacagcacccgcgcc
accgtgcctttccccttcgacatcaagaccctcatcatcgccaccaccatgggctttatc
tctttcttgggcgtcgtcctcttctgtctggtgctgctgtttctctggagccggggcaag
ggcaacaccaagcacaacatcgagattgagtatgtgccccgcaagtcggacgcaggcatc
agctccgccgacgcacctcgcaagttcaatatgaagatgatatga
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