KEGG   Phocoena phocoena (harbor porpoise): 136118836
Entry
136118836         CDS       T11058                                 
Symbol
SNUPN
Name
(RefSeq) snurportin-1 isoform X1
  KO
K13151  snurportin-1
Organism
pphc  Phocoena phocoena (harbor porpoise)
Pathway
pphc03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:pphc00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    136118836 (SNUPN)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pphc03041]
    136118836 (SNUPN)
Spliceosome [BR:pphc03041]
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    136118836 (SNUPN)
SSDB
Motif
Pfam: SPN1_m3Gcap_bd Snurportin1 Piezo_TM25-28 IBB
Other DBs
NCBI-GeneID: 136118836
NCBI-ProteinID: XP_065728232
LinkDB
Position
2:complement(117115865..117135369)
AA seq 361 aa
MEELSQALASSFSVSQDLNSTAAPHPRLSQYKSKYSSLEQSERRRRLLELQKSKRLDYVN
HARRLAEDDWTGMESEEEEEKEDDEEMDVDTGKKLPKRYANQLMLSEWLIDVPSDLGQEW
IVVVCPVGKRALIVASRGSTSAYTKSGYCVSSFSSLLPGGNRRNSATTKDYTILDCIYSE
VNQTYYVLDVMCWRGHPFYDCQTDFRFYWMHSKLPEEGLGEKTKLNPFKFVGLKNFPCTP
ESLCKVLSMDFPFEVDGLLFYHKQTHYSPGSTPLVGWLRPYMVSDVLGVAVPAGPLTAKP
EYAGYQLQQIIEHKRSQKEGIKKILTHKSSENGRYELEHLSTPKLKSPSHSPKHPGSLMD
N
NT seq 1086 nt   +upstreamnt  +downstreamnt
atggaagagctgagtcaagccctggctagtagcttttctgtgtctcaagatctgaacagc
acagctgccccacacccccgcctgtcccagtacaagtccaagtacagttccttggagcag
agtgagcggcgccgccggttactggaactgcagaaatcaaagcggctggattatgtgaac
catgccagaagactcgctgaagatgactggacagggatggagagtgaggaagaagaagaa
aaggaagatgatgaggaaatggatgttgacactggcaagaagttaccaaaacgctatgct
aatcaattaatgctgtcagagtggttaattgacgtcccttcagatttgggtcaggaatgg
attgtggtcgtgtgccctgttggaaaaagagcccttattgtggcctccaggggttctacc
agtgcctacaccaagagtggctactgcgtcagcagcttttcttcccttctgccaggaggc
aacaggcgaaactcagcaacaacgaaagactacaccattctggactgcatttacagtgag
gtgaaccagacctactacgttctggacgtgatgtgctggcggggacaccctttttatgac
tgccagactgatttccgattctactggatgcattcaaagttaccagaagaaggactggga
gagaaaaccaagctcaatccctttaaatttgtggggctaaagaatttcccttgtacccct
gagagcctgtgtaaggtgctgtctatggatttcccttttgaggtagatgggcttctcttc
taccacaagcagacccactatagccctggaagcactcctctggtgggctggctgcgccct
tacatggtgtcagatgttcttggcgtagctgtgccagctggcccgctgactgccaagcca
gaatatgctgggtaccagctccagcagattattgagcacaagaggagccagaaggaggga
ataaagaagatactcacacacaagtcctctgagaatggacgctatgagttggagcacctg
tctacccccaaactgaagagcccttcccatagccccaagcacccagggagcctcatggat
aactag

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