Phocoena phocoena (harbor porpoise): 136118872
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Entry
136118872 CDS
T11058
Symbol
PIF1
Name
(RefSeq) ATP-dependent DNA helicase PIF1
KO
K15255
ATP-dependent DNA helicase PIF1 [EC:
5.6.2.3
]
Organism
pphc Phocoena phocoena (harbor porpoise)
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pphc03032
]
136118872 (PIF1)
03029 Mitochondrial biogenesis [BR:
pphc03029
]
136118872 (PIF1)
Enzymes [BR:
pphc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
136118872 (PIF1)
DNA replication proteins [BR:
pphc03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
136118872 (PIF1)
Mitochondrial biogenesis [BR:
pphc03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Mitochondrial DNA maintenance factors
136118872 (PIF1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PIF1
Pif1_2B_dom
AAA_30
PH_LRR1
AAA_19
Herpes_Helicase
AAA_22
UvrD_C_2
ABC_tran
RsgA_GTPase
AAA_7
AAA_16
Mg_chelatase
PhoH
AAA_24
T2SSE
Parvo_NS1
Motif
Other DBs
NCBI-GeneID:
136118872
NCBI-ProteinID:
XP_065728283
LinkDB
All DBs
Position
2:complement(107552547..107558965)
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AA seq
641 aa
AA seq
DB search
MLSGTQAVQAECADAELRCRVAVEELSPGGQPRRRQALRTAELRLGRNERRELMLRLQAS
GPAGRPRCFALRAARLFTRFAASGRSTLRLPADGAPRTGAVQLLLSDCPPDRLRRFLRTL
RLKLAAAPGPGPASARTQLLGPRPRDFVTISPVQPEELRRAAATWVTDSTPVKRPTEPRS
GAKPSTEVPRWPLPVKKLSLPPTKPELSREQAAVLRVVLKGQSIFFTGSAGTGKSYLLKR
ILGSLPPTGTVATASTGVAACHIGGTTLHAFAGIGSGQAPLAQCVALAQRPGVRQGWLNC
QRLVIDEISMVEADLFDKLEAVARAVRQQNKPFGGIQLIICGDFLQLPPVTKGSQPPQFC
FQAKSWRRCVPVTLELTEVWRQTDKTFISLLQAVRLGRCSDEVTRQLRATAAHRVGRDGI
VATRLCTHQDDVALTNERQLQKLPGEVHSFEAMDSDPEQARTLDAQCPVSQLLQLKLGAQ
VMLVKNLAVSRGLVNGARGVVVGFEAEGRGLPQVRFLCGVTEVIRADRWMVQATGGRLLS
RQQLPLQLAWAISIHKSQGMSLDCVEISLGRVFASGQAYVALSRARSLQGLCVLDFDPMV
VRCDPRVLSFYATLRQDRGLSLESPDDDEAASDQENVDPNL
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atgctgtcgggcacccaggcagtgcaagcggaatgcgcggacgcggagctgcggtgccgt
gttgctgtggaggagttgagcccgggcgggcagccgcgaaggcgccaggccctacgcacc
gcggagctgagactgggtcgtaacgagcgccgcgagttgatgctgaggctgcaggcgtcc
gggcccgcggggcggccgcggtgctttgccctgcgcgccgcgcgcctcttcacgcgcttc
gccgcgtccgggcgcagcactctgcggcttcccgccgacggcgctccccggaccggcgcg
gtgcagctgctgctctccgactgcccccctgaccgcctgcgccgcttcctgcgcactctg
cgcctcaagctggccgcggccccgggtcccgggccggcctccgcccgcacgcagctgctt
ggcccgcggccccgcgacttcgtcaccatcagcccggtgcagcccgaggagctgcggcgc
gcggcggccacctgggtcacggactccacgccggtgaagcggcccacggagccccggtcc
ggggccaagcccagcaccgaagtcccaaggtggcccctgcctgtgaagaagctgagcttg
ccccccaccaaaccagagctttccagggaacaggctgctgtgctgagggttgtcctgaaa
ggccagagcattttcttcactgggagtgcagggacggggaagtcttatctgctgaagcgt
atcctgggctcactgcctcccacaggcactgtggccactgccagcactggggtggcagcc
tgccacatcgggggtactaccctccatgcctttgcaggcattggctcgggtcaggctccc
ctggcccagtgtgtggccctggcccagcggccaggtgtgcggcagggctggctgaactgc
cagcggctagtcattgatgagatctccatggtggaagcggacctatttgataagctggag
gccgtggccagagctgtccggcagcagaacaagccatttggagggatccagctcatcatc
tgtggggacttcctgcagctgccgcctgtaaccaagggatcccagcccccgcagttctgc
ttccaggccaagagctggaggagatgtgtcccagtgaccctggagctgacggaggtgtgg
cggcagacagacaagaccttcatctctctgctgcaagctgtgcggctgggcaggtgctca
gatgaggtcacccgccagctccgggccacggctgcccacagggtggggcgagatgggatt
gtggccacgaggctctgcacccaccaggatgatgtggcccttaccaacgagaggcagctg
cagaaactaccaggtgaggtacacagctttgaggccatggacagtgaccctgagcaagcc
cggaccctggatgcccaatgtcccgttagccagctccttcagctaaagctgggggctcag
gtgatgctggtgaagaacttggcagtgtctcggggcctggtaaatggtgcccgaggggta
gtagttgggttcgaagccgaggggagagggctgccccaggtgcggttcctgtgtggagtc
accgaggtcatccgtgcagaccgctggatggtgcaggccactgggggccggcttctcagc
cggcagcagctgcccctccagctggcctgggccatatccatccacaagagccagggcatg
tccctggattgcgtggagatctctctgggccgtgtgtttgccagcggccaggcctatgtg
gccctttcccgggcccgcagcctgcagggcctatgtgtgttggactttgaccccatggtg
gttcgctgtgacccccgtgtgctgagcttctatgctaccctgcggcaggacaggggcctc
agcctggagtccccagatgacgatgaggcagcctcagaccaggagaacgtggacccgaac
ctttga
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