Phocoena phocoena (harbor porpoise): 136119041
Help
Entry
136119041 CDS
T11058
Symbol
FAN1
Name
(RefSeq) fanconi-associated nuclease 1
KO
K15363
fanconi-associated nuclease 1 [EC:3.1.21.-
3.1.4.1
]
Organism
pphc Phocoena phocoena (harbor porpoise)
Pathway
pphc03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
136119041 (FAN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pphc03400
]
136119041 (FAN1)
Enzymes [BR:
pphc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.1 phosphodiesterase I
136119041 (FAN1)
DNA repair and recombination proteins [BR:
pphc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
Other FA pathway factors
136119041 (FAN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAN1_TPR
Fan1_SAP
VRR_NUC
FAN1_HTH
zf-TRAF
zf-WRNIP1_ubi
Motif
Other DBs
NCBI-GeneID:
136119041
NCBI-ProteinID:
XP_065728523
LinkDB
All DBs
Position
2:complement(145264059..145291719)
Genome browser
AA seq
1024 aa
AA seq
DB search
MMSVGKSSKKRPRRSLSSSKTKKNASNSIIAFFNNVPPVKLACPICSKMVPRYDLNRHLD
EMCANNGDITPADPGHVDLSSNVSTVDLTNIALEDVAPEKSSPSKINLTPGQSDAAKMGI
KQQTSPYFKSSDDAVCRTQDGLRHHNVKVIPLGSLSSKLSRRYIKAKRSIDKSEGFANQS
PQSFSSTGVRSLVDQCSEMEGQDQLLENSSQKENMFACNSLEEPSTPEHIVGGSTIMEAE
GLTAAQECGRSTLTPTFSDNAPVLPSPDLTLGHKLKSASEDHLAKQESIKGTDDKGVENC
EAGDCEEVKMTFVSQAPTQSSHWEAKSHNSTHDASIWSDSQALPPEGDSRSKNESTDQIP
LEQGSSCDVSRVTSPAPPDHPYYLRSFLVVLKAVFENEEDRMLFDEHEKGVITKFHQLSA
SGQKLYVRLFQRKFGWIKMNKLEYEEISADLTPVVRELTHAGFLQTESELQELSEVLELL
SAPELKALAKTFHLVNPSGQKQQLVNAFLKLAKQRSVCTWRKNQPGIGAVILKRAKDWAG
QSLRVCRDPRAVFSRVLLLFSLTHEVEEEEAACGGQGQLSTVLLVNLGRMEFPRYTVSRK
TQIFQDREDLIRYAAAAHMLNDISTAMASGAWEEARELARCAKQDWDRLKGHPSLRYHEK
LPLFLRCFTVGWVYTRILSRTVEILQRLHMYEEAVKELENLLSQKVYCPDSRGRWWDRLA
LNLHQHLKRLEPAIKCITAGLADPDVRTGHRLSLYQRAVRLRASPSCQKYAHLFRQLPEV
TVDDVKHVTVTGRLCPQSGPGKSVFVLEAGGTAPATVLCSVEELALAHYRRCGFDQGIHG
EGSTFSTLYGLLLWDVIFMDGIPDAFRNAYQAAPLDLCTDSFFASRAPAIEARLRQIHGA
PAESLRAWVAAAWQAQEGRVASLVSWDRFASLQQAQDLVSCLGGPILSGVCRRLATDFRH
CRGGLPDLVVWSSQSHHVKLVEVKGPSDRLSQKQMIWLDELHRLGADVEVCHVAAVGAKS
RGPN
NT seq
3075 nt
NT seq
+upstream
nt +downstream
nt
atgatgtctgtagggaaatcctcaaaaaaaagacctcgtagaagtttatcgagtagcaaa
actaaaaaaaatgcatctaactctattattgcgttttttaacaacgtaccgcctgttaaa
cttgcctgccccatttgtagtaaaatggtgccaagatacgacctaaaccgtcaccttgat
gaaatgtgtgctaacaacggtgacatcactccagctgaccctgggcatgttgacttaagt
tcaaatgtgtccacagtagatttgaccaatattgccttagaagatgtagcgccagagaag
tcgtcaccatcaaagatcaatttaacccctggccaaagtgatgcagcaaaaatgggcata
aaacagcagaccagcccgtattttaagagtagtgatgacgcagtgtgcagaactcaagat
gggctgagacatcataatgtgaaagtcatccctctgggaagcctgtcatctaaattgtcc
agaagatacataaaggctaaaagatcaatagataagagtgagggattcgccaatcagagt
ccacagagtttctcgtccacaggggttaggagcctggtggatcagtgttcagagatggaa
ggccaggatcagcttttggagaatagttctcaaaaggaaaacatgtttgcctgtaattct
ctggaggaaccaagcactcccgaacatattgtgggaggctctacaataatggaagctgaa
ggcctaacggctgcacaggaatgtgggagatcaactctcacccccaccttctcagataat
gctcccgtgttaccttcaccagatttaactcttgggcataaattaaagtctgcttcagag
gaccatcttgcaaagcaggagagtatcaaaggaacagatgataaaggtgttgaaaactgt
gaagcaggtgattgtgaagaggtaaaaatgacttttgtttcacaagctccaacccagtca
tcacattgggaggcaaaatctcataattctacacacgatgcttctatatggagtgacagc
caagcacttcctccagaaggtgacagtcgctcaaagaatgaaagcactgaccaaattcct
ttggagcaggggtcaagctgtgatgtttcccgtgtaacaagtccagcaccaccggaccat
ccttactaccttcggagtttcctcgtggtgctgaaagccgtgtttgagaatgaagaagac
aggatgctctttgatgagcacgagaagggcgttataactaaatttcatcaattatcagct
agcggtcagaagttatatgtcagactttttcaacgtaaattcggctggattaagatgaac
aaactggaatatgaagagatctccgctgacttaaccccggtggttagagagttgacgcat
gcaggcttcctgcagacggaatctgagttgcaagaactgtctgaggtgctcgagctcctt
tctgctccggaattgaaagccctggcaaagaccttccacttggtgaatcccagtgggcag
aagcagcagctggtgaatgcgtttctcaaattggccaaacagcgttcagtctgcacttgg
cgcaagaatcagcctggcattggtgcagtgattttgaaaagagctaaagactgggcggga
cagtctctgagagtgtgtagagacccccgggctgtgttctcccgggtcctgctgctgttt
tcactgacccacgaggtggaagaggaggaggcggcctgtggcgggcagggccagctttct
acggtgctgctggtcaaccttggccgcatggagtttcccaggtataccgtcagtcggaaa
acccaaatcttccaggatagagaggatctcatcaggtacgcagcggccgcgcacatgctg
aacgacatctccaccgcgatggccagcggggcctgggaggaagccagggagctcgctcgg
tgtgcaaagcaggattgggacagactgaaaggccacccgtccctgagataccacgagaag
ttaccactgtttctccgctgttttaccgttggttgggtttatacgaggattttgtcccga
accgttgaaatactgcagagacttcacatgtacgaggaagccgtcaaggagctggaaaac
cttttgtcccagaaagtgtactgtcctgacagcagaggccggtggtgggaccggctggct
ctcaacttgcaccagcacctgaagcgcctggagccggccatcaagtgcatcacagcaggg
ctggcggatccggacgtgcggacaggccaccgcctctcgctgtatcagagggccgtgcgc
ctgcgggcctctcccagctgccagaagtacgcgcacctcttccgtcagctcccagaagtc
actgtggatgacgtcaaacatgtgaccgtcacgggccggctctgcccacagtctgggccg
ggcaagtctgtcttcgtgctggaggctggggggaccgcccctgccaccgtcctgtgctct
gtggaggagctggcgctggcccattacagacgctgtggcttcgaccaggggattcacggg
gaagggtccaccttcagcacgctgtacggcctcctcctatgggatgtcatcttcatggac
gggataccagacgccttcagaaacgcctaccaggcggccccgctggacctctgcacggac
agcttcttcgccagcagagcaccggccatcgaggcccggctgcggcagattcacggtgcc
cccgcggagagcctgcgggcctgggtggcagccgcgtggcaggcccaggaaggcagggtg
gcctcccttgtcagctgggatcgctttgcttctcttcagcaagcccaggatcttgtgtcc
tgcctggggggccccatcctcagtggtgtgtgccggcgcctggccacggacttccgacac
tgccgagggggcctccctgacctggtggtgtggagctcccaaagtcaccacgttaagctg
gtggaagtgaagggccccagtgaccgtctttcgcaaaagcagatgatctggctggatgag
ctgcatcggcttggggcggacgtggaggtctgccatgtggctgcagtcggagccaagagc
aggggccccaactga
DBGET
integrated database retrieval system