Phocoena phocoena (harbor porpoise): 136119359
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Entry
136119359 CDS
T11058
Symbol
SCMH1
Name
(RefSeq) polycomb protein SCMH1 isoform X1
KO
K11461
polycomb protein SCMH1
Organism
pphc Phocoena phocoena (harbor porpoise)
Pathway
pphc03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
136119359 (SCMH1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pphc03036
]
136119359 (SCMH1)
Chromosome and associated proteins [BR:
pphc03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
PRC1.4 specific proteins
136119359 (SCMH1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MBT
SLED
SAM_1
RBR
SAM_2
SAM_PNT
Motif
Other DBs
NCBI-GeneID:
136119359
NCBI-ProteinID:
XP_065728902
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All DBs
Position
1:complement(33241660..33375519)
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AA seq
661 aa
AA seq
DB search
MLVCYSVLACESLWDLPCSIMGSPLGHFTWDKYLKETCSVPAPVHCFKQSYTPPSNEFKI
SMKLEAQDPRNTTSTCIATVVGLTGARLRLRLDGSDNKNDFWRLVDSAEIQPIGNCEKNG
GMLQPPLGFRLNASSWPMFLLKTLNGAEMAPIRIFHKEPPSPSHNFFKMGMKLEAVDRKN
PHFICPATIGEVRGSEVLVTFDGWRGAFDYWCRFDSRDIFPVGWCSLTGDNLQPPGTKVV
IPKNPYPASEANTEKPSIHSNTKTALEPQPGQRGRKPGKKRGRTPKPLIPHPISTPSKSA
EPLKFPKKRGPKPGSKRKPRTLLNPPPTSPTTSTPEPDTSTVPQDAATIPSSAMQAPTVC
IYLNKNGSTGPHLDKKKVQQLPDHFGPAQASVVLQQAVQACIDCAYHQKTVFGFLKQGHG
GAVISAVFDREQHTLNLPAVNSITYVLRFLEKLCHNLRSDNLFGNQPFTQTHLSLTTTEY
SHSHDRYLPGETFALGNSLGRSLEPHSDSMDSTLNPTNLVSTSQNLRNPGYRPLLPSCGL
PLGTASAVRRFCSRGVLNGSDGSRDMGSFWKLNHSRGSDRRDASRQSGRDPSSWTVEDVM
QFVREADPQLGPHADLFRKHEIDGKALLLLRSDTMMKYMGLKLGPALKLSYHIDRLKQGK
F
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atgctggtttgctacagtgttttagcttgtgagagtctctgggaccttccctgctccatc
atggggtcacctctaggtcattttacctgggacaaatacctaaaagaaacatgttcagtc
ccagcgcctgtccattgcttcaagcagtcctacacacctccaagcaacgagttcaagatc
agtatgaaattggaagcacaggatcccaggaacaccacatctacctgtattgccacagta
gttggactgacaggcgctcgcctccgccttcgccttgatggcagcgacaacaagaatgac
ttctggcgtctggttgactcagctgaaatccagcctatcgggaattgtgagaagaatggg
ggtatgctgcagcctccgctgggatttcggctgaatgcttcctcttggcccatgttcctt
ttgaagacgctaaatggagcagagatggctcccatcaggattttccacaaggaaccacca
tcaccttctcacaacttcttcaaaatgggaatgaagctggaagctgtggacaggaagaac
cctcatttcatttgcccagccactattggggaggtgcgaggctcagaggtgcttgtcact
tttgatgggtggcgaggggcctttgactactggtgccgcttcgactcccgggacatcttc
cctgtgggctggtgttccttgactggagacaacctgcagccgcctggcactaaagttgtg
attccaaagaatccctatcctgcatccgaggcgaacactgagaagcccagcatccacagc
aacaccaaaactgccttggagcctcaaccagggcagagggggcgtaaaccaggaaagaag
cggggccggacacccaagcccctaattccccatcccatctctaccccatccaagtcagct
gaacctttgaaattcccaaagaagaggggtcccaaacctggcagtaagaggaaacctcgg
actttgctgaacccaccacccacctcaccaacaaccagcacccctgaaccggataccagc
actgtaccccaagatgctgccaccatccccagctcagccatgcaggcccccacagtttgt
atttacttgaacaagaatggcagcacaggcccccacttagataagaagaaggtccagcag
ctccctgaccattttgggccagcccaagcctccgtggtgttgcagcaggctgtgcaggct
tgcatcgactgtgcttatcaccagaaaaccgtcttcggcttcctcaaacagggtcacggt
ggtgcagttatctcagccgtgtttgaccgtgagcagcacaccctcaacctcccagccgtc
aacagcatcacctacgtcctccgcttcctggagaaactctgccacaaccttcgcagtgac
aatctgtttggcaaccagccctttacacagactcacttgtcactcaccaccacagagtac
agccacagccacgacaggtacctaccaggtgagacctttgccctgggaaatagtctgggc
cggtccttggagccacactcagactcaatggactccaccttgaatcccaccaaccttgtc
agcacctcccaaaatcttcgaaaccctgggtaccggcctttgcttccatcctgtggcctc
ccattgggcactgcctcggctgtgcgcaggttctgctccaggggcgtgttaaatggatca
gacggaagcagggatatggggtcattttggaaactaaatcattcccgagggtcggatcgc
cgggatgcctctcgacagagtggccgggacccctcctcgtggacagtcgaggacgtgatg
cagtttgtccgggaagctgatcctcagcttggaccccatgctgacctctttcgcaaacac
gagatcgacggcaaggccctgcttctgctgcgtagcgacacgatgatgaagtacatgggt
ctgaagctggggcctgcgctcaagctctcctaccacatcgaccggctgaagcagggcaag
ttctga
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