Phocoena phocoena (harbor porpoise): 136119387
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Entry
136119387 CDS
T11058
Symbol
SEMA6D
Name
(RefSeq) semaphorin-6D isoform X1
KO
K06842
semaphorin 6
Organism
pphc Phocoena phocoena (harbor porpoise)
Pathway
pphc04360
Axon guidance
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
136119387 (SEMA6D)
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Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
Motif
Other DBs
NCBI-GeneID:
136119387
NCBI-ProteinID:
XP_065728953
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Position
2:90365805..90379015
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AA seq
1086 aa
AA seq
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MRFFLLCAYMLLLMISQLRAVSFPEDDEPLNTVDYHYSRQYPVFRGRPSGNESQHRLDFQ
LMLKIRDTLYIAGRDQVYTVNLNEIPKTEVIPNKKLTWRSRQQDRENCAMKGKHKDECHN
FIKVFVPRNDEMVFVCGTNAFNPMCRYYRLNTLEYDGEEISGLARCPFDARQTNVALFAD
GKLYSATVADFLASDAVIYRSMGDGSALRTIKYDSKWIKEPHFLHAIEYGNYVYFFFREI
AVEHNNLGKAVYSRVARICKNDMGGSQRVLEKHWTSFLKARLNCSVPGDSFFYFDVLQSV
TDIIQINGVPTVVGVFTTQLNSIPGSAVCAFSMDDIEKVFRGRFKEQKTPDSVWTAVPED
KVPKPRPGCCAKHGLAEAYKTSIDFPDETLSFIKSHPLMDSAVPPIADEPWFTKTRIRYR
LTAIAVDHSAGPHQNYTVIFVGSEAGMVLKVLAKTSPFSLNDSVLLEEIEAYNHAKCNAE
NEEDRRVISLQLDKVHHALYVAFSSCVIRIPLSRCERYASCKKSCIASRDPYCGWLSPGA
CGQVTPGMLLLTEDFFAFHNHSAGGFEQDTEYGNTAHLGDCHEILPTSTTPDYKIFGGPT
SDMEVSSSSVTTMASIPEITPKVIDTWRPKLTSSRKFVVQDDPNTSDFTDPYSGIPKGVR
WEVQSGESNQMVHMNVLITCVFAAFVLGAFIAGVAVYCYRDMFVRRNRKIHKDAESAQSC
TDSSGSFAKLNGLFDSPVKEYQQNIDSPKLYSNLLTSRKELPPNGDTKSMVMDHRGQPPE
LAALPTPESTPVLHQKTLQAMKSHSDKAHGHGASRKEAPQFFPSSPPPHSPLSHGHIPSA
IVLPNATHDYNTSFSNSNAHKAEKKLQNIDHPLTKSSSKRDHRRSVDSRNTLNDLLKHLN
DPNSNPKAIMGDIQVAHQTLMLDPVGPMSEVPPKVPHREASLYSPPSTLPRNSPTKRVDV
PTTPGVPMTSLERQRGYHKNSSQRHSISAMPKNLSSPNGVLLSRQPSMNRGGYMPTPAGA
KVDYIQGTPVSVHLQPSLSRQSSYTSNGTLPRTGLKRTPSLKPDVPPKPSFVPQTTSVRP
LNKYTY
NT seq
3261 nt
NT seq
+upstream
nt +downstream
nt
atgaggttcttcctgctttgtgcctacatgctgcttctgatgatttcccagctgagagca
gtcagctttcctgaagacgatgaaccccttaatactgttgactatcactattcaaggcaa
tatccggtttttagaggacgcccttcaggcaatgaatcacagcataggctggactttcag
ctgatgttgaaaattcgagacacactttatattgctggcagggatcaagtttatacggta
aacttaaatgaaatccccaaaacagaagtaataccaaacaagaaactgacatggcggtca
agacaacaggatcgagaaaactgtgctatgaaaggcaagcataaagatgaatgccacaac
tttattaaagtatttgttccgagaaacgatgagatggtttttgtttgtggcaccaatgct
tttaatcccatgtgtagatactataggttgaataccttagagtatgatggggaagaaatt
agtggcttggcaaggtgcccatttgatgccagacaaaccaatgttgcccttttcgccgat
gggaagctgtattctgccacagtggctgacttcctggccagtgatgccgttatttatcga
agcatgggcgatggatctgcccttcgtactataaaatatgattccaagtggatcaaagag
ccacactttcttcacgccatagaatatggaaactatgtctatttcttctttcgagaaatt
gctgtagaacataataatttaggcaaggctgtatattcccgtgtggcccgcatatgtaaa
aacgacatgggtggctcccagcgggtcctggagaaacactggacttcatttctgaaggct
cgtcttaactgttctgtccccggagattcctttttctactttgatgttctgcagtctgtc
acagacataatacaaatcaatggcgtccccactgtggtcggggtgtttaccacacagctc
aacagcattcctggttctgcagtctgtgcatttagcatggatgacattgaaaaagtattc
agaggacggtttaaagaacagaaaactccagattctgtttggacagcagtccctgaagac
aaagtaccgaagccaaggcctggctgttgtgcaaagcatgggcttgccgaagcttataaa
acctccatcgatttcccggatgaaaccctgtcgttcattaaatcccaccccctgatggac
tctgccgtcccacccattgccgacgagccctggttcacaaagactcggatcaggtacaga
ctgacggccatcgccgttgaccattctgcgggaccccaccagaactacacagtcatcttc
gttggctcggaagctggcatggtacttaaagttttggcaaaaaccagtcctttctctttg
aatgacagcgtgttactggaagagattgaagcgtacaaccatgcaaagtgcaatgctgag
aatgaggaggacagaagggtcatctcactccagttggataaagttcatcatgctttatac
gtggcgttctctagctgtgttatccgcatccccctcagtcgctgtgagcgttatgcatcg
tgtaaaaagtcttgtattgcatctcgagacccgtactgtggctggttaagcccaggggcc
tgtggtcaagtgaccccagggatgctgctgttaactgaagacttctttgctttccataac
cacagcgctggaggatttgaacaggacacggaatatggcaacacagcccatctaggggac
tgccatgaaattttgcctacttcaactacaccagattacaaaatatttggcggtccaaca
tctgacatggaggtatcttcatcttctgttaccacaatggcaagtatcccagaaattaca
cctaaagtgattgatacctggagacctaaactgaccagctcccggaaatttgtagttcaa
gatgacccaaacacttctgattttactgatccttattcaggtatcccaaagggtgtacga
tgggaagtccaatctggagagtccaaccagatggtccacatgaatgtcctcatcacctgt
gtctttgcggcttttgtcttgggtgcattcattgcaggtgtggcagtatactgctaccgt
gacatgtttgttcggagaaacagaaagatccataaagatgcagaatctgcccagtcgtgc
acagactccagtggaagttttgccaagctgaatggtctctttgacagcccagtcaaggaa
tatcaacagaatatagattctcccaaattgtatagtaacctgctgaccagtcggaaagag
ctgccacccaatggagatacgaaatccatggtcatggaccatcgaggccaacctcccgag
ctggctgctctcccgacacctgagtctacacctgtgcttcaccagaagaccctgcaggcc
atgaagagccactcagacaaggcccacggccacggggcttcaaggaaggaagccccccag
ttctttccttctagtcctccaccgcattccccactaagtcatggacatatccccagtgcc
attgtccttcctaatgctacccatgactacaacacatctttctcaaactccaatgctcac
aaagctgaaaagaaacttcaaaacattgaccaccctcttacaaagtcatccagtaaaagg
gatcaccggcgttctgtggattccagaaacaccctcaacgatctcctgaagcatctaaat
gacccaaacagtaaccccaaagccatcatgggagacatccaagtggcccaccagacccta
atgctggatcccgtgggacctatgtctgaggtcccgcccaaggtccctcatcgcgaggca
tcactctactctcctccctcgactctccccagaaatagcccaaccaagcgagtggacgtc
cccaccactcctggcgtcccaatgacttctctggaaagacagaggggttatcataaaaat
tcctcccagaggcactctatatctgctatgcctaaaaacttaagttcaccaaatggtgtt
ttgttatctagacagcctagtatgaaccgtgggggctacatgcccacccccgcaggggcg
aaggtggactatattcagggaacaccagtaagtgttcatctgcagccttccctctccaga
cagagcagctacaccagtaatggcacccttcccaggacgggactaaagaggacaccatca
ttaaaacctgatgtaccaccaaagccttcatttgttccccaaaccacatctgtcagacca
ctgaacaaatacacttactag
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