Phocoena phocoena (harbor porpoise): 136119450
Help
Entry
136119450 CDS
T11058
Symbol
LRRC49
Name
(RefSeq) leucine-rich repeat-containing protein 49 isoform X1
KO
K16606
leucine-rich repeat-containing protein 49
Organism
pphc Phocoena phocoena (harbor porpoise)
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pphc03037
]
136119450 (LRRC49)
04812 Cytoskeleton proteins [BR:
pphc04812
]
136119450 (LRRC49)
Cilium and associated proteins [BR:
pphc03037
]
Primary cilia and associated proteins
Tubulin polyglutamylase and associated proteins
136119450 (LRRC49)
Cytoskeleton proteins [BR:
pphc04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Tubulin modification proteins
Tubulin polyglutamylase complex components
136119450 (LRRC49)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_4
LRR_9
LRR_8
LRR_14
TAFII28
LRR_LRWD1
Motif
Other DBs
NCBI-GeneID:
136119450
NCBI-ProteinID:
XP_065729069
LinkDB
All DBs
Position
2:113183953..113312387
Genome browser
AA seq
751 aa
AA seq
DB search
MIPGKYRSVSGRAASNVNCGLHLVIQASSLPEKNKVEFKLNKETPSFPGRLLQHDLERNY
SSRQGDGRVISPSPRNKSSYISSTTNVTELCGLKMKTTMSSLSAFGDSSIQTPSKSRIRP
GCHSPGPNVSGDHINLVSSSMPSFPILQRSSEEKILYSDRLTLERQKLTVCPIIDGEEHL
RLLNFQHNFITRIQNISNLQRLIFLDLYDNQIEEISGLSTLRSLRVLLLGKNRIKKISNL
ENLKSLDVLDLHGNQITKIENVNHLCDLRVLNLARNLLSHVDNLNGLDSLTELNLRHNQI
TFVRDVDNLPCLQRLFLSFNNISTFESVCCLADATSLSDITFDGNPIAQESWYKHTVLQN
MTQLRQLDTKRVTEEERRMASVVAKKEEEKKRESHKQSLLKEKKRLTINNVARKWDLQQH
RITNIATNQDRKDSDSQDHCQDDGSTISAFPEETGSLDSGLTSALQGLSVTDTHLVEVDG
DTLSLYGSGALECLDRNWSVQTAGMVTTVSFTFIEFDEIVQVLPKLRIKFPNSLHLKFKE
TNLVTLQQFNALAQLRQVDQLTVDPQGNPVVNFTLWKYYVLFRLSHFNMQKINGTEVTQN
DMIMAERLFGILAHVASSELPQYHLISILGDARKKQFRYLLETKGKKPGIVNEENNDSKR
LVGESTNRATLNYTTRDFYNEKLEEIKEKKKFCKIYIEDLVKEATEINMKNEALQKLWPQ
MFIELVRDAVMEIRNKNSYMKLCLQQITDQK
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
atgattcccgggaaataccgctctgtttctggccgggctgcgagcaacgtgaactgtggt
cttcatctggtaattcaagcatcatcgcttcctgaaaaaaacaaagttgaattcaagcta
aataaagaaacgccatcattccctggtcgactcttacaacatgatcttgaaagaaactac
tcaagtaggcaaggtgatggaagagtaataagcccttcacctcgtaataaatcatcctac
atctcatccacaacaaatgtgacagaattatgtgggctgaaaatgaaaactaccatgagc
tccttatcagcatttggagattcttccattcagacaccttcaaagtccagaatccggcca
ggctgtcatagtcctggcccaaatgtatctggtgatcatattaatttggtgagctcatca
atgccatcatttcccattctccaacgttcttctgaagagaaaattctttactcagacagg
ttgaccctagaaaggcaaaagctgactgtatgtcctatcatcgatggggaagaacacctt
cgtctgttgaactttcaacacaattttataactcggatccaaaatatttctaatctgcag
aggctaatattcttggatttatatgataaccagattgaagaaattagtgggctttctact
ctgagatccctccgtgtccttctgttggggaaaaacagaatcaagaaaatctcaaatctg
gagaatctaaaaagcttagatgtcttggaccttcatggaaatcagattaccaaaattgaa
aatgtcaatcatttgtgtgatttgagagttttaaatcttgccaggaaccttttaagtcat
gttgataatcttaatgggctggattcactaactgagcttaacctgcgacacaatcagatc
acttttgtgagagatgtggataatttgccctgcctccaacgtctgtttctcagcttcaac
aatatatctacttttgagagtgtttgctgccttgctgatgctacttctctctcagacatc
acttttgatggcaatccaatagctcaagagtcatggtacaagcacactgtccttcagaat
atgacgcagctgcgccagctggacacgaagagggtcacggaagaagaaaggcgtatggca
tctgttgtagccaaaaaagaggaagagaagaagcgagaaagtcataagcaatctttgctt
aaggagaagaaaaggttaacaattaacaacgtagctcgaaagtgggacttgcaacaacat
cgaattaccaatattgctacaaaccaagatagaaaagattcagactctcaggaccactgt
caggacgatggaagcaccatctctgcatttccagaggaaacagggtctctggactcagga
ctcaccagtgctttacaaggtctatctgtcacagacacacaccttgtcgaagtggatgga
gacacactttccttgtatggctcaggagcgctggaatgtctggatcggaattggagcgtg
caaacagcaggaatggtgacaacagtgtccttcactttcatagaatttgatgaaatcgtc
caagtgcttcccaaattgaggattaagtttcctaattctttgcaccttaaattcaaggaa
acaaatcttgtaacgctgcagcaatttaatgcactagcacaactccgtcaagttgaccag
ctgacagttgatcctcaaggaaatccagttgtcaattttacactctggaaatattatgtt
ctgtttagactgagccattttaatatgcagaaaataaatggaacagaggtgacgcaaaat
gatatgataatggctgaaaggctctttggaatcctagcacatgtagcatcttctgaatta
ccccagtaccatctgatttcaattctgggtgatgccaggaagaagcaattccggtatctt
ctagaaacgaaagggaaaaaacccggtattgtcaatgaagaaaataatgatagcaagaga
cttgtgggagaaagcacaaatcgtgctacactaaattataccacaagagacttttataat
gaaaagctagaggaaataaaggaaaaaaagaaattctgcaagatatatattgaggatctt
gtgaaggaagccacagaaatcaacatgaaaaatgaggctttgcagaagctttggccacag
atgttcattgagcttgttagggacgcagtcatggagatccgcaataaaaactcctatatg
aagctttgcctacagcagataactgaccaaaaatag
DBGET
integrated database retrieval system
