Phocoena phocoena (harbor porpoise): 136119459
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Entry
136119459 CDS
T11058
Symbol
SCFD1
Name
(RefSeq) sec1 family domain-containing protein 1
KO
K19998
sec1 family domain-containing protein 1
Organism
pphc Phocoena phocoena (harbor porpoise)
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pphc04131
]
136119459 (SCFD1)
Membrane trafficking [BR:
pphc04131
]
SNARE
SNARE associated proteins
Syntaxin-binding proteins
136119459 (SCFD1)
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
136119459 (SCFD1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec1
cwf21
Motif
Other DBs
NCBI-GeneID:
136119459
NCBI-ProteinID:
XP_065729117
LinkDB
All DBs
Position
2:complement(67297648..67432806)
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AA seq
641 aa
AA seq
DB search
MVGAKMAAAAAASIRERQTVALKRMLNFNVPHIKNSTGEPVWKVLIYDRFGQDIISPLLS
VKELRDMGITLHLLLHSDRDPIPDVPAVYFVMPTEENIDRMCQDLRNQLYESYYLNFISA
ISRSKLEDIANAALAASAVTQVAKVFDQYLNFITLEDDMFVLCNQNKELVSYRAINRPDI
TDTEMETVMDTIVDSLFCFFVTLGAVPIIRCSRGTAAEMVAVKLDKKLRENLRDARNSLF
TGDTLGAGQFSFQRPLLVLVDRNIDLATPLHHTWTYQALVHDVLDFHLNRVNLEESSGVE
NSPAGARPKRKNKKSYDLTPVDKFWQKHKGSPFPEVAESVQQELESYRAQEDEVKRLKSI
MGLEGEDEGAISMLSDNTAKLTSAVSSLPELLEKKRLIDLHTNVATAVLEHIKARKLDVY
FEYEEKIMSKTTLDKSLLDIISDPDAGTPEDKMRLFLIYYISAQQAPSEADLEQYKKALT
DAGCNLNALQYIKQWKAFAKMASAPTSYGNTTTKPMGLLSRVMNTGSQFVMEGVKNLVLK
QQNLPVTRILDNLMEMKSNPETDDYRYFDPKMLRGNDSSVPRNKNPFQEAIVFVVGGGNY
IEYQNLIDYIKGKQGKHILYGCSELFNATQFIKQLSQLGQK
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atggtgggagccaagatggcggcggccgcagcagccagtattcgagagagacaaacagtg
gctttgaaacgtatgttgaattttaatgtgcctcatattaaaaacagcactggagaacca
gtatggaaggtgctcatttatgatagatttggccaagatatcatctctcctctgctatct
gtgaaggagctgagagacatgggaatcactttgcatctgcttttgcactctgatcgagat
cctattccagatgttcctgcagtgtactttgtaatgccaactgaagaaaatattgacaga
atgtgtcaggatcttcgaaatcaactctatgaatcatattatttaaattttatttctgct
atttcaagaagtaaactggaagatattgcaaatgcagcattagcagctagtgcagtaaca
caagtagccaaggtttttgatcagtatctcaattttattactttggaagatgatatgttt
gtattatgtaatcaaaataaggagcttgtttcatatcgtgccattaatagaccagatatc
acagacacagaaatggaaactgttatggacactattgttgacagcctcttttgctttttt
gttacactgggtgctgtccctataatcagatgttcaagaggaacagcagcagaaatggta
gcagtgaaactagataagaaacttcgggaaaatctgagagatgcaagaaacagtcttttt
acaggtgacacacttggagctggccagttcagcttccaaaggcctttattagtccttgtt
gacagaaacatagatttggcaactcctttacaccatacttggacatatcaagccttggtg
catgatgtactggatttccacttgaacagagttaatttggaagagtcttcaggagtggag
aattccccagctggtgctagaccaaagagaaaaaacaagaagtcttatgatttaactcca
gttgataaattttggcagaaacataaaggaagtccattcccagaagttgcagaatcagtt
cagcaagaactagagtcttacagagcacaggaagatgaggttaaacgacttaaaagcatt
atgggactagaaggggaagatgaaggagccataagtatgctgtctgacaatactgctaag
ttaacatcagccgttagttctttgccagaactccttgaaaaaaaaagacttattgatctc
catacaaatgttgccactgctgttttagaacatataaaggcaagaaaattggatgtatat
tttgaatatgaagaaaaaataatgagcaaaactactctggataaatcgcttctagatata
atatcagaccctgatgcaggaactccagaagataaaatgaggctgtttcttatctattac
ataagtgcacagcaagcaccttctgaggctgatttggagcaatacaaaaaagctttaact
gatgctggatgcaaccttaatgccttacaatatatcaaacagtggaaggcttttgccaag
atggcttcagctcctaccagctatggcaacactaccactaaaccaatgggtctcttatca
cgagtcatgaatacaggatcacaattcgtgatggaaggagtgaagaacctggtattgaaa
cagcaaaatctacctgttactcgtattttagacaatctcatggagatgaagtcaaaccct
gaaactgatgactatagatattttgatcccaaaatgctgcggggcaatgacagctcagtt
ccaaggaacaaaaatccatttcaagaggcaattgtttttgtggtgggaggaggcaactac
attgaatatcaaaatcttattgactacataaaggggaaacaaggcaagcacatcttatat
ggctgcagtgaactttttaatgctacacagttcataaaacagctgtcacaacttggacaa
aaataa
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