KEGG   Phocoena phocoena (harbor porpoise): 136119898
Entry
136119898         CDS       T11058                                 
Symbol
LARP1
Name
(RefSeq) la-related protein 1 isoform X1
  KO
K18757  la-related protein 1
Organism
pphc  Phocoena phocoena (harbor porpoise)
Brite
KEGG Orthology (KO) [BR:pphc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pphc03019]
    136119898 (LARP1)
Messenger RNA biogenesis [BR:pphc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     136119898 (LARP1)
SSDB
Motif
Pfam: LARP1_HEAT La SGP
Other DBs
NCBI-GeneID: 136119898
NCBI-ProteinID: XP_065729282
LinkDB
Position
3:131218093..131305384
AA seq 1101 aa
MATQVEPLLPGGAPLLQAEEHGGLVRKKPPPSSEGKGEPGANDVGGGEPDGGARRPRPPC
AKPHKEGTGQLERESPRPPQPPGAEGPAVSDGEEGGGGEPAAGGGAAGAAGAGRRDFVEA
PPPKVNPWTKNALPPVLATVNGQSPPEHAAPARVVRAAVPKQRKGSKVGDFGDAINWPTP
GEIAHKSVQPQSHKSQPARKLPPKKDMKEQEKGEGSDSKESPKTKSDESGEEKNGDEDYQ
RGGQKKKGNKHKWVPLQIDMKPEVPREKLVSRPTRPPEPRHTPANRGEIKGSEPATYVPV
PVAPPTPAWQPETKSEPAWHDQDETSSVKSDGAGGARASFRGRGRGRGRGRGRGRGGTRT
HFDYQFGYRKFDGAEGPRTPKYMNNITYYFDNVSSTELYSVDQELLKDYIKRQIEYYFSV
DNLERDFFLRRKMDADGFLPITLIASFHRVQALTTDISLIFAALKDSKVVEIVDEKVRRR
EEPEKWPLPGPPIVDYSQTDFSQLLNCPEFVPRQHYQKETESAPGSPRAVTPVPTKTEEV
SNLKTLPKGLSASLPDLDSENWIEVKKRPRPSPARPKKSEEPRFLHPTTLPQQLPSQQLM
SKDQDEQEELDFLFDEEMEQMDGRKNTFTAWSDEDSDYEIDDRDVNKILIVTQTPPYMRR
HPGGDRTGNHTSRAKMSAELAKVINDGLFYYEQDLWTEKFEPEYSQIKQEVENFKKVNMI
SREQFDTLTPEPPVDPNQEVPPGPPRFQQVPTDALANKLFGAPEPSTIARSLPTTVPESP
NYRNARTPRTPRTPQLKDSSQTSRFYPVVKEGRTLDAKMPRKRKTRHSSNPPLESHVGWV
MDSREHRPRTASISSSPSEGTPAVGSYGCTPQSLPKFQHPSHELLKENGFTQHVYHKYRR
RCLNERKRLGIGQSQEMNTLFRFWSFFLRDHFNKKMYEEFKQLALEDAKEGYRYGLECLF
RYYSYGLEKKFRLDIFKDFQEETVKDYEAGQLYGLEKFWAFLKYSKAKNLDIDPKLQEYL
GKFRRLEDFRVDPPMGEEGNHKRHPVAAGGGSGEGRRRCPSQSSGRPSAVVSQPPTPATG
QPIREDAKWTSQHSDAQTLGK
NT seq 3306 nt   +upstreamnt  +downstreamnt
atggccactcaggtggagccgctgctgccggggggcgccccactcttgcaggccgaagag
cacggggggttggtgaggaagaagccgccgccgtcgtccgagggcaagggcgagcccggg
gcgaacgacgtcggagggggggagccggacggcggcgcccggagacctcggccgccctgc
gccaagccacacaaggagggcacagggcagctggagcgcgagagcccgcggccgccgcag
ccgcctggcgccgagggcccggccgtcagcgacggggaggagggcggcggcggcgagccg
gccgctggcggaggagctgccggagccgcgggcgccgggcgccgagacttcgtggaggcc
cctccgcccaaggtgaacccgtggactaagaacgcgttgccgccggtcctggccaccgtg
aacggacagtctcctccagaacatgctgctccggccagggtggtgagggcagcagttcct
aaacagcgcaaaggtagcaaggttggtgactttggagatgcaatcaactggccaacacct
ggagagatagcccacaagagtgtgcagccacagtcccacaagtctcagcctgcccgcaag
ctgccacccaaaaaggacatgaaggaacaggagaaaggagaggggagtgatagtaaggag
agcccgaaaaccaaatcagatgaatcgggggaggagaagaatggggatgaggactaccag
cgaggcgggcagaagaagaaagggaacaaacacaagtgggttccgttgcaaatagacatg
aagcctgaagtgcccagagagaaactggtctctcgccctactcgcccgccggagccacga
cacacacctgccaaccgcggggagatcaaagggtctgagcctgccacctacgtgcccgtg
cccgtggccccccccaccccagcctggcaaccagagaccaaatcggagcctgcctggcac
gaccaggatgagacatcgagtgtgaagagtgatggggctggtggggcgcgggcttccttc
cgtggccgtggacgggggcgtggtcgcggccggggacgcggccggggtggcactcgaacc
cattttgactaccagttcggctaccgaaagtttgacggtgcagaggggccgcgcaccccc
aagtacatgaacaacatcacctactactttgacaatgtcagcagcactgagctttacagc
gtggaccaggagctgcttaaagactacatcaaacgccagattgaatactacttcagcgtg
gacaatttagagcgagacttcttcctgcgacggaaaatggatgctgacggtttccttccc
atcacacttattgcgtccttccaccgagtacaggcccttaccactgacatttcactcatt
tttgcggccctaaaggacagcaaggtggtggagatcgttgatgaaaaagtccgccgaagg
gaggagccagagaaatggcctcttcctggtcccccaatagtggattattcccagactgat
ttctcccagcttctcaactgcccagagtttgtgccccgccagcactatcagaaggagaca
gagtcggcgcctggctctccccgtgctgtcaccccagtgccaactaaaacagaggaggtc
agcaacctaaagaccctgcccaagggcctgtctgccagcctccctgacctggattctgag
aactggattgaagtgaagaaaagacctcggccctccccagcacgacccaagaagtcagag
gagccccggttcctccacccgactactctgcctcagcagctgccctctcagcagctgatg
tccaaggatcaagacgagcaagaggaactggatttcctgtttgacgaggaaatggagcag
atggatggacggaagaacacctttaccgcctggtctgatgaggactctgactatgagatt
gatgaccgggatgtcaacaagatcctcattgtcacccagacgccaccttacatgcgccgg
cacccggggggggaccgcacaggcaaccacacctcgcgtgccaagatgagcgctgagctg
gccaaggtcattaacgatgggctcttctactacgagcaggacctgtggactgagaagttt
gaacccgagtattcccagatcaagcaagaagtcgagaacttcaagaaagtcaacatgatc
agtcgggagcagtttgacacactaacccctgagccccctgtggatcccaaccaagaggtc
cctcctggaccacctcgcttccagcaagttcccactgatgctctggccaacaagctgttt
ggtgcccctgagccctccaccattgcccgctctctaccaaccactgtcccagagtcgcca
aactatcgcaacgccaggacccctcgcactccccggacaccgcagctcaaagactcaagc
cagacgtcacggttttatccagtggtgaaggaaggtcggacgctagatgctaagatgcct
cggaaaaggaagaccagacacagctcgaacccacccttggagagtcacgtgggctgggtg
atggattcccgcgagcacaggccccggactgcttccataagctccagcccctcagaaggc
acgcctgcggttggcagctatggctgtacccctcaatcgctgcccaagttccagcatcct
tcccacgagctgctcaaggaaaacggcttcacacaacacgtctaccacaagtatcgtagg
cgctgccttaacgagcggaaacgcttgggcattggccagtctcaggagatgaacactctc
ttccgcttctggtccttcttcctccgagatcacttcaacaaaaagatgtatgaggagttc
aagcagctggctctggaggatgccaaagaaggctacagatatggtttggagtgccttttt
cgatactacagttatggcctggaaaagaagttccggctggacatatttaaggactttcag
gaggaaaccgtgaaggactatgaagctggtcagctgtacgggctggagaagttctgggcc
ttcttgaaatattccaaagccaaaaatttggacattgaccccaaacttcaagaatacctc
ggcaaattccgacgtcttgaagacttccgagtggatccccccatgggtgaggagggcaac
cacaagcgacacccagtggcagcaggaggtggcagcggcgagggcaggaggcggtgcccc
tcccagtcttctggcaggccctccgccgtggtcagccaaccccccacaccagctaccggc
cagcccatccgagaagacgctaaatggacaagccagcactcggacgcacagactttggga
aagtga

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