Phocoena phocoena (harbor porpoise): 136119900
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Entry
136119900 CDS
T11058
Symbol
SEMA6A
Name
(RefSeq) semaphorin-6A isoform X1
KO
K06842
semaphorin 6
Organism
pphc Phocoena phocoena (harbor porpoise)
Pathway
pphc04360
Axon guidance
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
136119900 (SEMA6A)
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Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
DUF3481
Motif
Other DBs
NCBI-GeneID:
136119900
NCBI-ProteinID:
XP_065729291
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Position
3:complement(96175752..96237053)
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AA seq
1044 aa
AA seq
DB search
MRSEALLLYFTLLHFAGAAFPEDSEPISISHGNYTKQYPVFVGHKPGRNTTQRHRLDIQM
IVIMNRTLYIAARDHIYTVDIDTSHTEEIYCSKKLTWKSRQADVDTCRMKGKHKDECHNF
IKVLLKKNDDTLFVCGTNAFNPSCRNYKMDTLEPFGDEFSGMARCPYDAKHANIALFADG
KLYSATVTDFLAIDAVIYRSLGDSPTLRTVKHDSKWLKEPYFVQAVDYGDYIYFFFREIA
VEYNTMGKVVFPRVAQVCKNDMGGSQRVLEKQWTSFLKARLNCSVPGDSHFYFNILQAVT
DVIRINGRDVVLATFSTPYNSIPGSAVCAYDMHDVAIVFTGRFKEQKSPDSTWTPVPDER
VPKPRPGCCAGSSSLEKYATSNEFPDDTLNFIKTHPLMDEAVPSILNKPWFLRTMVRYRL
TKIAVDTAAGPYQNHTVVFLGSEKGIILKFLARIGNSGFLNDSLFLEEMSVYNPEKCSYD
GVEDKRIMGMQLDKASSSLYVAFSTCVIKVPLGRCERHGKCKKTCIASRDPYCGWVKEGG
ACAHLSPGSRLTFEQDIEHGNTDGLGDCHNSFVALNDISTPLPDHEMSYDTVYGHSSSLL
PSTTTSNSAAQEGYESRGGMLDWNDSPDSTDSLGAVSSHNHQDKKGVIRESYLKGHDQLV
PVTLLAIAVILAFVMGAVFSGIIVYCVCDHRRKDVSSVHRKEKELAHSRRGSMSSVTKLS
GLFGDTQSKDPKPEAILTPLMHNGKLATPSNTAKMLIKADQHHLDLAALPTPESTPTLQQ
KRKPNRGSREWERNQNLINACTKDMPPMGSPVIPTDLPLRASPSHIPSVVVLPITQQGYQ
HEYVDQPKMSEVAQLALEDQAATLEYKTIKEHLSSKSPNHGVNLVENLDSLPPKVPQREA
SLGPPGASLSQNGLSKRLEMHHSSSYGLDYKRSYPTNSLTRSHQAATLKRNNTNSSNSSH
LSRNQSFGRGDNPPPAPQRVDSIQVHSSQPSGQAVTVSRQPSLNAYNSLTRAGLKRTPSL
KPDVPPKPSFAPLSTSMKPNDACT
NT seq
3135 nt
NT seq
+upstream
nt +downstream
nt
atgaggtcagaagccttgctgctatatttcacactgctacacttcgctggggctgctttc
ccagaagattctgagccaatcagtatttcgcatggcaactatacaaaacagtatccggtg
tttgtgggccacaagccaggacggaacaccacacagaggcataggctggacatccagatg
atcgtgatcatgaacagaaccctctacattgctgctagggaccatatttatactgttgat
atagacacctcacacacagaagaaatttattgtagcaaaaaactgacatggaaatctaga
caggctgatgtagacacatgcagaatgaagggaaaacataaggatgagtgtcacaacttt
attaaagttcttctaaagaaaaacgatgatactttgtttgtctgtggaactaacgccttc
aacccttcctgcagaaactataagatggatactttggaaccttttggggatgaatttagt
ggaatggccagatgcccttatgatgccaaacatgccaacattgcactgtttgcagacgga
aaactgtactctgctacagtgactgacttcctggccattgatgcagtcatctaccggagt
ctcggagacagcccaaccctacggaccgtcaagcatgattcaaaatggttgaaagaaccg
tattttgtccaagcggtagattatggagactacatctacttcttctttagggaaatagcg
gtggagtacaacaccatgggaaaggtagttttcccaagagtggctcaggtttgtaagaat
gacatgggagggtcacaaagagtcctggagaaacagtggacatctttccttaaagctcgc
ctgaactgctcagttccaggggactctcatttttatttcaacatcctccaggccgttaca
gacgtgattcgtattaatggccgtgatgttgtcctggcaaccttttccacaccttataac
agcatccctgggtctgcagtgtgtgcctatgacatgcatgatgtcgccattgtttttact
gggagattcaaagaacagaagtctccagattccacatggacaccagttcctgatgaacga
gtacctaagcctaggccaggttgctgcgctggctcatcctccttagaaaaatatgcaacc
tccaatgaatttcctgacgataccctgaatttcatcaaaacgcacccgctcatggatgag
gccgtgccctccatcctcaacaagccatggttcctgaggacgatggtcagataccgcctg
accaaaattgcggtagacaccgctgctgggccatatcagaatcacactgtggttttcctg
ggatcagagaaaggaatcatcttgaagttcttggccaggataggaaacagtggtttccta
aatgacagccttttcctggaggagatgagcgtctacaaccctgaaaagtgcagctatgat
ggagtagaagacaagaggattatgggcatgcaactggacaaagcaagcagctctctgtat
gttgcattttccacttgtgtgataaaggttccccttggccggtgtgaacgacatgggaag
tgcaaaaaaacctgtatcgcttccagagacccctactgtgggtgggtaaaggaaggaggt
gcctgtgcccatctgtcacctggcagtagactgacttttgaacaggacatagagcatggc
aatacagatggcctgggagactgtcacaattccttcgtggcactgaatgacatttcaact
cctctaccagatcatgaaatgtcttacgacacagtatatgggcactccagttccctcctg
cccagcaccaccacgtccaattcggcggctcaagaggggtatgagtctaggggaggaatg
ctggactggaatgattcacctgacagcacagactctttgggggcagtgtcttcccataat
caccaagacaagaagggagtgattcgggagagttatctcaaaggccacgaccagctcgtt
cctgtcaccctcctggccattgcggtcattctggcttttgtcatgggagccgtcttctcg
ggcatcatcgtctactgcgtctgcgatcaccgtcgcaaagacgtgtcctccgtgcaccgc
aaggagaaggagctcgcccactcgcgccgcggctccatgagcagcgtcaccaagctcagc
ggcctctttggggacacccagtccaaagaccccaagccggaggccatcctcacgccactc
atgcacaacggcaagctcgccactcccagcaacaccgctaagatgctcatcaaggctgac
cagcaccacctggacctggccgccctgcctaccccagagtccaccccgacgctgcagcag
aagcgcaagcccaaccgcggcagccgcgagtgggaaaggaaccagaacctcatcaacgcc
tgcaccaaggacatgccccccatgggctcccccgtgatccccaccgacctgcctctgcgg
gcctcccccagccacatccccagcgtggtcgtgctgcccatcacgcagcagggctaccag
cacgagtacgtggaccagcccaaaatgagcgaggtggcccagctggcgctggaggaccag
gcggccaccctggaatataagaccatcaaggaacatctcagcagcaagagtcccaaccat
ggggtgaacctggtggagaacctggacagcctgccccccaaagtcccccagcgggaggcc
tccctgggtcctcccggagcctccctgtctcagaacggcctgagcaagcggctggagatg
caccactcctcgtcctacgggcttgattataagaggagctaccccacgaactcgctcacg
agaagccaccaggccgccacgctcaaaagaaacaatactaactcctccaactcctcccac
ctctccagaaaccagagctttggccggggagacaacccaccccccgccccgcagagggtg
gactccatccaggtgcacagctcgcagccctcgggccaggccgtgactgtttcgaggcag
cccagcctcaacgcctacaactcactgacccgggcggggctgaagcgcacgccctcgcta
aagccggacgtgccccccaaaccttcctttgcccccctttccacctccatgaagcccaac
gatgcgtgtacataa
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