Phocoena phocoena (harbor porpoise): 136119913
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Entry
136119913 CDS
T11058
Symbol
NLRP3
Name
(RefSeq) NACHT, LRR and PYD domains-containing protein 3 isoform X1
KO
K12800
NACHT, LRR and PYD domains-containing protein 3
Organism
pphc Phocoena phocoena (harbor porpoise)
Pathway
pphc04217
Necroptosis
pphc04621
NOD-like receptor signaling pathway
pphc04623
Cytosolic DNA-sensing pathway
pphc04625
C-type lectin receptor signaling pathway
pphc05132
Salmonella infection
pphc05133
Pertussis
pphc05135
Yersinia infection
pphc05164
Influenza A
pphc05171
Coronavirus disease - COVID-19
pphc05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
136119913 (NLRP3)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
136119913 (NLRP3)
04623 Cytosolic DNA-sensing pathway
136119913 (NLRP3)
04625 C-type lectin receptor signaling pathway
136119913 (NLRP3)
09160 Human Diseases
09172 Infectious disease: viral
05171 Coronavirus disease - COVID-19
136119913 (NLRP3)
05164 Influenza A
136119913 (NLRP3)
09171 Infectious disease: bacterial
05132 Salmonella infection
136119913 (NLRP3)
05135 Yersinia infection
136119913 (NLRP3)
05133 Pertussis
136119913 (NLRP3)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
136119913 (NLRP3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pphc04131
]
136119913 (NLRP3)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
pphc04054
]
136119913 (NLRP3)
Membrane trafficking [BR:
pphc04131
]
Autophagy
Other autophagy associated proteins
TRIM-directed selective autophagy
136119913 (NLRP3)
Pattern recognition receptors [BR:
pphc04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
136119913 (NLRP3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
NLRC4_HD2
PYRIN
WHD_NOD2
LRR_6
FISNA
LRR_4
nSTAND3
NB-ARC
Motif
Other DBs
NCBI-GeneID:
136119913
NCBI-ProteinID:
XP_065729316
LinkDB
All DBs
Position
3:complement(158789250..158840249)
Genome browser
AA seq
1035 aa
AA seq
DB search
MASVRCKLARYLEDLEDVDFKKFKMHLEDYPSQKGCTSLPRGQTEKADHVDLATLMIDFN
GEEKAWDMAKWIFAAINRRDLYEKVKRDEPEWDNANVSVISQEESLEEEWMGLLGYLSRI
SICKKKKDYCKKYRKYVRSRFQCIKDRNARLGESVNLNKRFTRLRLIKEHRSQQEREHEL
LAIGRTSAKMQDGPVSSMNLELLFDPEDQYSEPVHTVVFQGAAGIGKTILARKIMLDWAS
EELYKDKFDYLFYIHCREVSLGMQRSLGDLIASCCPGPNPPIGKIVSKPSRILFLMDGFD
ELQGAFDEHTEALCTNWQKVERGDILLSSLIRKRLLPEASLLITTRPVALEKLQHLLGRA
RHVEILGFSEVRKKEYFFKYFSDEQQAREAFRLIQENEILFTMCFIPLVCWIVCTGLKQQ
MDSGKSLARTSKTTTAVYIFFLSSLLQSQGGSQEHHNSATLWGLCSLAADGIWNQKILFE
ECDLRNHGLQKADVSAFLRMNLFQKEVDCEKFYSFIHMTFQEFFAAMYYLLEEENQGEMR
NMQWSNLKLPNRDVRVLLENYGKFEKGYLIFVVRFLFGLINQERTSYLEKKLSCKISQKI
RLELLKWIEAKAKAKMLQIEPSQLELFYCLYEMQEEDFVQRAMGYFPKIEIKLSTRMDHV
VSSFCIENCHHMESLSLRLLHNSSKEEEEEEEEEKEEEVQHSDVNHCVLSDPHVTYSQRL
VNYLTSSICRGIFSVLSNNWNLTELNLSGNTLGDPGMKVLCETLQQPGCNIRRLWLGQCC
LSHQCCFNISSVLSNNQKLVELDLSHNALGDFGIRLLCVGLRHLFCKLKKLWLVSCCLTS
VCCDDLASVLSTNHSLTRLYLGENALGDAGVGILCEKAKNPQCNLQKLGLVNSGITSGGC
VALCSVLSTNKNLTHLYLRGNALGDVGVKLLCKGLLHAHCKLQVLELDNCSLTSHCCWGL
STLLTSNQSLRKLSLGNNDLGDLGVMLLCEVLKQQGCLLKCLKLCGMYFNYDTKRALETL
QEEKPELTIVFEPAR
NT seq
3108 nt
NT seq
+upstream
nt +downstream
nt
atggcaagcgtccgctgcaagctggctcgttacctggaggatctggaagacgtagacttt
aagaaattcaagatgcacttagaagactatcctagtcagaagggctgcacgtcacttcct
cggggtcagacggagaaagcagatcacgtggatctagccactctgatgattgatttcaat
ggagaggagaaagcatgggacatggccaagtggatttttgctgcaatcaacaggagagac
ctttacgagaaagttaagagggatgagccggaatgggacaatgcaaatgtttctgtgata
agccaggaggaaagccttgaagaggagtggatgggtttactggggtacctttccagaatc
tctatttgtaaaaaaaagaaagattactgtaagaagtacagaaaatatgtgagaagcaga
ttccagtgtatcaaagacaggaacgcccgtctgggtgagagcgtgaacctcaacaaacgc
ttcaccaggctgcgtctcatcaaggaacaccggagccagcaggagagagaacatgagctc
ctggccattggtaggacctcagccaagatgcaggatggccccgtgagttccatgaacttg
gaattgctttttgatcctgaggaccagtactctgagcctgtgcacacggtggtattccag
ggagcagcgggcattggcaaaacaatactggccaggaagatcatgttggactgggcgtca
gaggaactttacaaggacaaatttgactatttgttttacattcactgtcgggaggtgagc
cttgggatgcagaggagcctgggggacctgatcgccagctgctgccctggcccaaaccca
cccataggcaagattgtgagcaaaccttccaggatcctcttccttatggacggttttgat
gagcttcaaggtgcctttgatgagcacacagaagcactctgcacgaactggcagaaggtg
gagcggggagacattctcctgagcagtctcatcagaaaaagactgcttcccgaggcctct
ctgctcatcaccacaagacctgtggccctggagaaacttcagcacttgctgggccgggct
cgtcatgtggagatcctgggtttctcagaggtcagaaagaaggaatatttctttaagtat
ttctcagatgagcagcaagccagggaagccttcaggctgattcaggagaacgagatcctc
ttcaccatgtgctttattcccctggtctgctggattgtgtgcacggggctgaaacagcaa
atggacagtggcaagagtcttgctcggacgtccaagaccaccactgcagtgtacatcttc
ttcctctccagtttgttgcagtcccaaggagggagccaggagcaccacaactctgccacc
ctctggggtctctgttcattggctgcagatggaatctggaaccagaaaatcctgtttgag
gagtgtgatctcaggaatcacggcctgcagaaggcagatgtgtctgctttcttgaggatg
aacctattccaaaaggaagtggactgtgagaaattctacagcttcatccacatgaccttc
caggagttctttgctgccatgtactatctgctggaagaggagaatcagggggagatgagg
aacatgcagtggagtaatttgaagcttcccaaccgagatgtgagggtccttctcgaaaac
tacggcaagtttgaaaaagggtatctgatttttgttgtccgttttctctttggccttata
aaccaggagagaacctcctacctggagaaaaaactgagttgcaagatctctcagaaaatc
aggctggagttgctaaaatggattgaagcaaaagccaaggccaagatgctacagattgag
cccagccagctggaattgttctactgtttgtatgagatgcaggaggaggactttgtgcaa
agggccatgggctacttccccaaaattgagatcaagctctccaccagaatggaccatgtg
gtttcttctttttgtattgagaactgccaccacatggaatcactttcgctgagattgctc
cataactcatccaaggaggaggaagaggaagaggaggaggagaaagaggaggaagttcaa
cactctgatgtgaaccattgtgtcctctctgatcctcatgttacatattctcagcgattg
gtgaactatctcacttccagcatttgcaggggcatcttctcagtcctgagcaataattgg
aacctcactgaattgaacctcagtggcaataccctgggagacccagggatgaaggtatta
tgtgaaacactccagcaacctggatgtaacattcgcagattgtggttggggcagtgttgc
ctttcccatcagtgctgcttcaacatctcctcggtcttgagcaacaatcagaagctggtg
gaactggatctgagccacaatgccctgggagactttggaatcagacttttgtgtgtggga
ctgaggcatctattttgcaagctgaagaagctctggttggtcagttgctgtctcacatcg
gtgtgttgtgacgatctcgcatctgttctgagcaccaaccattccctgaccagactctac
ttgggagaaaatgctctgggagacgcaggagttggaattttatgtgaaaaagcaaagaat
ccacaatgtaacctgcagaaactggggttggtgaattctggcattacgtcaggtggttgt
gtagctctgtgctcggtgctcagcacaaacaagaatctcacacacctttacctacggggc
aatgctcttggagacgtgggggtcaagctactctgtaagggactcttacatgcccactgc
aagcttcaggtgttggaattagacaactgcagcctcacgtcacactgctgctggggtctt
tccacacttctgacttctaaccagagcctgcgaaagttgagcctaggcaacaatgacctg
ggtgatctgggggtcatgctactctgtgaagtgctgaaacagcagggctgcctcctgaaa
tgcctgaagttgtgtggaatgtacttcaattatgatacaaaacgtgcgttagaaacactt
caagaagaaaagcctgagttgaccattgtctttgagcctgctcggtag
DBGET
integrated database retrieval system
