Phocoena phocoena (harbor porpoise): 136119932
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Entry
136119932 CDS
T11058
Symbol
DNMT1
Name
(RefSeq) DNA (cytosine-5)-methyltransferase 1 isoform X1
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
pphc Phocoena phocoena (harbor porpoise)
Pathway
pphc00270
Cysteine and methionine metabolism
pphc01100
Metabolic pathways
pphc05206
MicroRNAs in cancer
Module
pphc_M00035
Methionine degradation
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
136119932 (DNMT1)
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
136119932 (DNMT1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pphc03000
]
136119932 (DNMT1)
03032 DNA replication proteins [BR:
pphc03032
]
136119932 (DNMT1)
03036 Chromosome and associated proteins [BR:
pphc03036
]
136119932 (DNMT1)
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
pphc02048
]
136119932 (DNMT1)
Enzymes [BR:
pphc01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
136119932 (DNMT1)
Transcription factors [BR:
pphc03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
136119932 (DNMT1)
DNA replication proteins [BR:
pphc03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
136119932 (DNMT1)
Chromosome and associated proteins [BR:
pphc03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
136119932 (DNMT1)
Prokaryotic defense system [BR:
pphc02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
136119932 (DNMT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAH
DNA_methylase
DNMT1-RFD
DMAP_binding
zf-CXXC
HTH_12
Motif
Other DBs
NCBI-GeneID:
136119932
NCBI-ProteinID:
XP_065729350
LinkDB
All DBs
Position
3:166474004..166516896
Genome browser
AA seq
1614 aa
AA seq
DB search
MPARTAPARVPALASRAFSLPDDVRRRLKDLERDSLTEKECVKEKLNLLHEFLQTEIKNQ
LCDLETKLHKEELSEEGYLAKVKSLLNKDLSLENGAHAFSREVNGCLENGSQTSGEEHRV
EIAEKKKSPKPVSKLCMPRRSKSDAETKSAEVSSSPRITRQTTRQTTITSHFTRGPAKRK
PEEDAEKAKSDDSVDEEEKDQEEKRRRVTSRERVAGPLPAEEPGRLRPGTHVEEEERDDK
EEKRLRSQTKELTPKQKSKEEPDRDARPGGAQAEMNEGEDKDEKRHRSQPKDLASKRRPE
EKEPERVKPQISEEKDEDEKEEKRRRTTCKEPTEKKMARTKMAVVSSKTDPLKCIECGQY
LDDPELRYEQHLPDAVEEIQLLTNERLSIFDANESGFESYEDFPQHKLTCFSVYCKRGHL
CPIDTGLIEKDVELLFSGSAKPIYEDDPSPEGGVNGKNLGPINEWWIAGFDGGEKALLGF
STSFAEYILMDPSPEYAPLFSVMQEKIYISKIVVEFLQNNPDSTYEDLINKIETTVPPSM
LNLNRFTEDSLLRHAQFVVEQVESYDRAGDSDEQPIFLTPCMRDLIKLAGVTLGKRRAER
RQTIRHPAKEKDRGPTKATTTKLVYQIFDTFFAEQIEKDDKEDKENAFKRRRCGVCEICQ
QPECGKCKACKDMVKFGGSGRSKQACQKRRCPNMAMKEADDDEEVDDNIPEMPSPKKMHQ
GKKKKQNKDRIFWVGEAVKTDGKKSYYKKVCIDSETLEVGDCVSVIPDDSSKPLYLARVT
ALWEDSSNGQMFHAHWFCAGTDTVLGATSDPLELFLVDECEDMQLSYIHSKVQVVYKAPS
ENWALEGGVDPEALMSEDDGKTYFYQLWYDQDYARFESPPKTQPMEDNKYKFCASCARLA
EMRQKEIPRVMEQLEDLDGRVLYSLATKNGIQYRVGDGVYLPPEAFTFNIKLSSPVKRPR
KEPVDEALYPEHYRKYSDYIKGSNLDAPEPYRIGRIKEIFCSKKSNGRPNETDIKIRVNK
FYRPENTHKSTPASYHADINLLYWSDEEAVVDFKAVQGRCTVEYGEDLPECLQDFSAGGP
DRFYFLEAYNAKSKSFEDPPNHARSPGNKGKGKGKGKSRTKSQSSEPSELETEIKLPKLR
TLDVFSGCGGLSEGFHQAGISETLWAIEMWDPAAQAFRLNNPGSTVFTEDCNVLLKLVMA
GEVTNSRGQKLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSFLSYCDYYRP
RYFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAP
GEQLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGPFRTITVRDTMSDLPEIRNG
ASAQEISYNGEPQSWFQRQLRGSQYQPILRDHICKDMSALVAARMRHIPLAPGSDWRDLP
NIEVRLSDGTLARKLRYNYHDKKNGCSSAGALRGVCSCVEGKACDPAARQFNTLIPWCLP
HTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPD
TYRLFGNILDKHRQVGNAVPPPLAKAIGLEIKRCMMVRARESTSVKIKEETAKD
NT seq
4845 nt
NT seq
+upstream
nt +downstream
nt
atgcctgcccgtaccgccccagcccgggtgcccgcgctggcctcccgggccttctcactg
cccgacgatgtccgcaggcggctcaaagatttggaaagagatagtttaacagaaaaggaa
tgcgtgaaggagaaattgaatctcttgcatgaatttctgcagacagaaataaagaatcaa
ttatgtgacttggaaaccaaattacataaagaagaattatcagaggagggctacctggct
aaagtcaaatcccttttaaataaagatttgtccttggagaacggagctcatgctttcagt
cgggaagtgaatggatgtctagaaaacgggagccagacaagtggtgaggagcacagagtg
gaaatagcagagaaaaagaagtcccccaaacctgtttccaaactttgcatgcccaggaga
agcaagtctgatgcagaaacaaaatcagctgaagtctcatctagccccaggattacaagg
caaactaccaggcagaccaccatcacatctcatttcacaaggggccctgccaaacggaaa
cctgaggaagacgctgaaaaagcaaaatcagatgattctgtcgacgaagaagaaaaagac
caggaggaaaagagacgtagagttacatccagagaacgagttgctggaccgctccctgca
gaagaaccgggaagactaagaccaggaacacacgtggaagaagaagaaagagatgataaa
gaagaaaagagactcagaagtcaaaccaaagaactaacacctaaacagaaatctaaggag
gagccagacagagatgcgaggcccggaggagctcaggctgaaatgaatgaaggagaagac
aaagatgaaaagaggcacagaagtcaacccaaagatctagctagcaaacggagaccagaa
gaaaaagaacctgaaagagtaaaaccacagatttctgaagagaaagatgaggatgaaaag
gaggagaagagacgcagaactacatgcaaagaaccaactgagaagaaaatggctcgaacc
aaaatggcagtagtgtcctccaagaccgatcctctgaagtgcattgagtgcggacagtac
ctggatgaccccgagctaagatatgaacagcatctccctgatgcagtggaagagatacag
ttgttgacaaatgagagactgtccatctttgatgccaatgaatctggctttgagagttac
gaggattttccccaacacaaactgacctgcttcagcgtgtactgtaaacgaggtcacctg
tgcccgatcgacaccggcctcattgagaaggatgtcgagctcctcttttctggttcagca
aagccaatatatgaggatgacccgtctcccgaaggtggtgttaatggcaaaaatcttggt
ccaataaatgaatggtggattgctggctttgatggaggtgaaaaggctctccttggcttt
agcacctcatttgccgaatacattttgatggatcccagcccagagtatgcaccactgttc
agtgtgatgcaagagaagatctacataagtaagatagtagttgagttcctgcagaacaac
cctgactcaacatacgaagacctgatcaataagattgagaccactgttcctccttctatg
ctcaacctgaatcgattcacagaggattctctccttcgacacgcccagtttgtggtggaa
caagtagagagttatgatcgggctggggacagtgacgagcagcccatcttcctgaccccc
tgcatgagagacctgatcaagttggccggggtcaccttgggaaaaaggcgagctgaaagg
cggcagaccatccggcatcctgccaaggagaaggacagaggccccaccaaagccaccact
acgaagctggtctaccagatctttgacactttctttgcggagcaaattgaaaaggatgac
aaagaagacaaggagaacgcctttaaacgccggcggtgtggcgtctgtgagatttgtcaa
cagcctgagtgtggaaagtgtaaagcctgtaaggatatggttaaatttggtggcagcgga
aggagcaaacaggcttgccaaaagaggaggtgtcccaacatggccatgaaggaggcagat
gatgatgaagaagtggatgacaatattccagagatgccatcacccaaaaagatgcatcag
gggaagaaaaagaagcagaacaaggatcggatcttttgggttggagaagctgtcaagacc
gatgggaagaagagttactataagaaggtatgcatcgactcggaaaccctggaagtgggg
gactgtgtttctgttattccagatgattcttcaaaaccactgtatttagcaagggtcacg
gcgctgtgggaggacagcagcaacgggcagatgtttcatgcccactggttctgtgctggg
acggacacggtcctcggggccacgtcggaccccctggagctgttcctggtagacgaatgt
gaggacatgcagctttcatacattcacagcaaagtgcaggtcgtttataaagccccgtcg
gaaaactgggccttggagggaggcgtggaccctgaggccctgatgtcggaggatgacgga
aagacctatttctaccagctttggtatgaccaagactacgcaagatttgagtcccctcca
aaaactcagccaatggaggacaacaagtacaagttctgtgcaagctgtgcacgtctggct
gaaatgaggcagaaggaaattcccagggtcatggagcagctcgaggacctggatggacgg
gtcctctacagcttagccaccaagaacggcatccagtatcgagtgggcgatggcgtgtac
ctcccccccgaggccttcaccttcaacattaagctgtccagtcctgtgaaacgcccacgg
aaggagcctgtggatgaagctctgtatccagaacactaccggaaatactctgactacatc
aaaggcagcaacctagatgcccctgagccgtaccgtattggccgcatcaaagagatcttc
tgcagcaagaagagcaacggcaggcccaacgagacggatatcaagatcagagtcaacaag
ttttacaggccggagaacacgcacaagtccaccccggcgagttaccacgcagacatcaac
ctgctttattggagtgacgaggaggctgtggtggacttcaaggccgtgcagggccgctgc
accgtggagtacggggaggacctgcccgagtgcctccaggacttctccgctggtggcccc
gaccgcttctacttccttgaggcctataatgccaagagcaaaagctttgaagatcctcca
aaccatgcccgtagccctggaaataaagggaaagggaagggaaaagggaaaagcaggaca
aagtcgcaaagctctgagccgagcgaactggagacggaaatcaagctgccgaagctgcgg
accctggatgtgttttctggctgcgggggtttgtcggaagggttccaccaagcaggcatc
tcggaaacgctgtgggccatcgagatgtgggaccccgcggcccaggcgttccggctgaac
aatcccgggtccacggtgttcacagaggactgcaacgtcctgctgaagctggtcatggcc
ggggaggtgaccaactcccgcggccagaagctgccgcagaagggagacgtggagatgctg
tgtggcgggcctccttgccaaggctttagcggcatgaaccgcttcaactctagaacgtac
tctaagttcaagaactccctggtggtctccttcctcagctactgcgactactaccggccc
aggtacttcctcctggagaatgtcaggaacttcgtctccttcaagcgctccatggtcctg
aagctcacgctccgctgcctggtccgcatgggctaccagtgcaccttcggcgtgttgcag
gctggtcagtacggcgtggcccagacgcggaggcgggccatcatcctggccgcggccccc
ggagagcagctccctctgttcccggagccgctgcacgtgttcgcgccccgggcctgccag
ctgagtgtcgtagtcgacgacaagaagtttgtcagcaacatcaccaggttgagctcgggt
ccgttccgaaccatcaccgtgcgggacacgatgtccgaccttcctgagattcggaacgga
gcttcagcgcaggagatctcgtacaacggggagcctcagtcctggttccagaggcagctc
cggggctcgcagtaccagcccatcctcagggaccacatctgtaaggacatgagcgcgttg
gtggctgctcgcatgcggcacatccctctagccccgggctcagactggcgtgacctgcca
aacatcgaggtgcggctctctgatggcaccttggccaggaagctgcggtacaactaccac
gacaagaagaatggctgcagcagtgccggggctctccgcggggtctgctcctgcgtggaa
ggcaaagcctgtgaccctgcggccagacagttcaacactctcattccctggtgcctgccc
cacaccgggaacaggcacaaccactgggccggcctctacggacggctcgagtgggacggc
ttcttcagcacgaccgtcaccaaccccgagcccatgggcaagcagggccgcgtgctccac
ccagagcagcaccgcgtcgtgagtgtgcgggagtgcgcccgctctcagggcttccccgac
acctaccggctgttcggcaacatcctggacaagcaccggcaggtgggtaacgctgtgcca
ccgccactggccaaagccatcggcttggagatcaagcgctgtatgatggtcagagcgcga
gagagcacctcagttaaaatcaaggaggagactgctaaggactag
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integrated database retrieval system
