Phocoena phocoena (harbor porpoise): 136119987
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Entry
136119987 CDS
T11058
Symbol
COLGALT1
Name
(RefSeq) procollagen galactosyltransferase 1
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
pphc Phocoena phocoena (harbor porpoise)
Pathway
pphc00310
Lysine degradation
pphc00514
Other types of O-glycan biosynthesis
pphc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
136119987 (COLGALT1)
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
136119987 (COLGALT1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pphc01003
]
136119987 (COLGALT1)
Enzymes [BR:
pphc01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
136119987 (COLGALT1)
Glycosyltransferases [BR:
pphc01003
]
O-Glycan biosynthesis
O-linked Gal type
136119987 (COLGALT1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_25
Glyco_tranf_2_4
Anp1
Motif
Other DBs
NCBI-GeneID:
136119987
NCBI-ProteinID:
XP_065729456
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Position
3:161194832..161214666
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AA seq
623 aa
AA seq
DB search
MAATPRACRGHGRPLPVLLLLLLLALPPLEGPPGAAAYFPEERWSPESPLQAPRVLVALL
ARNAAHALPSTLGALERLRHPRDRTALWVATDHNSDNTSAVLREWLVAMKSLYHSVEWRP
AEEPKSYPDEEGPKHWSDSRYEHVMKLRQAALKSARDMWADYILFVDADNLILNPDTLTL
LIAENKTVVAPMLDSRAAYSNFWCGMTSQGYYKRTPAYIPIRKRDRRGCFAVPMVHSTFL
IDLRKAASRNLAFYPPHPDYTWSFDDIIVFAFSCKQAEIQMYVCNKEVYGFLPVPLRAHS
TLQDEAESFMHVQLEVMVKHPSAEPSRFLSVPAKTPDKMGFDEVFMINLKRRQDRRERML
RALQEQEIECRLVEAVDGKAMNTSQVEALGIQMLPGYRDPYHGRPLTKGELGCFLSHYNI
WKEVVDRRLQKSLVFEDDLRFEIFFKRRLMNLMQDVEREGLDWDLIYVGRKRMQVEHPEK
AVPRVRNLVEADYSYWTLAYVISLQGARKLLAARPLSKMLPVDEFLPVMFDKHPVSEYKA
HFSPRDLRAFSVEPLLVYPTHYTGDDGYVSDTETSVVWNNEHVKTDWDRAKSQKMREQQA
LSREAKNSDVLQSPLDSAARDEL
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgaccccacgcgcatgccgggggcacgggcggcccctcccggtgctgctgctg
ctgctgctgttggcgctgccacctttggagggcccgccgggcgccgccgcctacttccca
gaggagcgctggagccccgagtcgccgctgcaggcgccgcgcgttctcgtcgcgctgctg
gcgcgcaacgcggcccacgcgctgccttccacgctgggcgcgctcgagcggctgcggcac
ccccgggaccgcacagctctgtgggtggccacggaccacaactcagacaacacgtcagcc
gtgcttcgggaatggctggtggccatgaagagtttgtaccactctgtggagtggcggccg
gcagaggagcccaagtcctacccagatgaggagggccccaaacactggtctgactcacgc
tatgagcacgtcatgaagttacgccaggcagccctgaaatcggcccgggacatgtgggcc
gattacatcctgtttgtggacgcggacaacctgattctcaaccctgacacgctgaccctg
ctcatcgctgagaacaagacggtggtggcccccatgctggattcccgggctgcatactcc
aacttctggtgtgggatgacctcccagggctactacaagcgcacgcctgcctacatcccc
atccgcaagcgggaccgccggggctgctttgcagtccccatggtgcactcgaccttcctg
attgacctgaggaaggcggcatccaggaacttggcgttctaccctccccaccctgactat
acctggtccttcgatgacatcattgtttttgccttctcctgcaaacaggcagagatccag
atgtacgtctgcaacaaggaggtgtatggctttctgccggtgccactgcgggcacacagc
accctccaggatgaggccgagagcttcatgcacgtgcagctggaggtcatggtgaagcac
ccatccgcggagccctcgcggttcctctcggtgccggccaagacgccagacaagatgggc
tttgacgaggtcttcatgatcaacctgaagcggcggcaggaccgacgggaacgtatgctg
cgcgcgctgcaggagcaggagatcgagtgccggctggtggaggctgtggacggcaaagcc
atgaacactagccaggtagaggcactgggcatccagatgctgcccggctaccgggatcct
taccacgggcggcccctcaccaagggcgaactgggctgcttcctcagccactataacatc
tggaaagaggttgtggaccgcaggctgcagaaatcactcgtgttcgaggacgacctgcgc
ttcgagatcttcttcaagaggcgcctaatgaaccttatgcaggatgtggagcgggagggt
ctggactgggacctcatctacgtgggccggaagcggatgcaggtggagcaccccgaaaag
gctgtgccccgcgtgaggaacctggtggaggctgactactcgtactggacgctggcctat
gtgatctccctgcaaggcgcccgcaagctgctggctgcccggccactctccaagatgctg
cccgtggacgagttcttgccggtcatgttcgacaagcacccagtgtctgaatacaaggcc
cacttctcccctcgggacctgcgcgccttctccgtggagcccctgctcgtctaccccaca
cactacacaggggacgacgggtacgtgagcgacacggagacctcggtcgtgtggaacaac
gagcacgtcaagaccgactgggaccgggccaaatcccagaagatgcgcgagcagcaggcc
ctgagccgcgaggccaagaactctgacgtgctgcagtcccccctggacagcgctgcccgg
gatgagctctga
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