Phocoena phocoena (harbor porpoise): 136120017
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Entry
136120017 CDS
T11058
Symbol
SEC24A
Name
(RefSeq) LOW QUALITY PROTEIN: protein transport protein Sec24A
KO
K14007
protein transport protein SEC24
Organism
pphc Phocoena phocoena (harbor porpoise)
Pathway
pphc04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
136120017 (SEC24A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pphc04131
]
136120017 (SEC24A)
Membrane trafficking [BR:
pphc04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
136120017 (SEC24A)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_BS
Sec23_helical
zf-Sec23_Sec24
Gelsolin
TOR1L1_N
Sen15
Motif
Other DBs
NCBI-GeneID:
136120017
NCBI-ProteinID:
XP_065729500
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All DBs
Position
3:112742126..112800090
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AA seq
1089 aa
AA seq
DB search
MSQPGIPASGGTPIGLQAQNGAARASGSPYTNGPVQNALMSSQVSVSQGYNSQLPGSYPH
LIPAKTLNPVSGQSNSGGSQTVSPLSNYQGPGQTVYRPSVASNPVTPSLRSGPVPQMPLP
TSQNPAATPMPSGSFLPGANIPPPLNWQYNYSSQTNHCPRASSQPTMSGNANLTTPQYVS
SGDASLQNNFIKSGSAPPLVNTPLPTTFQPGAPLGPPPTGAPPPVRALTPQKSTHRAVPQ
PTFNSASNQEGIIPNTNNGSMVVHNSYDEIEGGGFLATPQLTNKNPTMSRSVGYSYPSLP
PGYQSTIPPSTTGMPPSSLNYPSGPQAFTQTPLGANHLPASMSGLSLHPEGLRVINLLQE
RNMLPLTPLQPPVPNLHEDIQKLNCNPELFRCTLTSIPQTQALLNKAKLPLGLLLHPFKD
LVQLPVVTSSTIVRCRSCRTYINPFVSFLDQRRWKCNLCYRVNDVPEEFMYNPLTRVYGE
PHRRPEVQNATIEFMAPSEYMLRPPQPPVYLFVFDVSHNAVETGYLNSVCQSLLDNLDLL
PGNTRTKIGFITFDSTIHFYSLQEGLSQPQMLIVSDIEDVFIPMPENLLVNLNESKELVQ
DLLKTLPQMFTKTLETQSALGPALQAAFKLMSPTGGRMSVFQTQLPTLGVGALKPREEPN
QRSSAKVRKSLSAXXDLCWCFLLWCSNSSXWQNLKGVCGCISRYSAGSVYYYPSYHHQHN
PVQVQKLQKELQRYLTRKIGFEAVMRIRCTKGLSIHTFHGNFFVRSTDLLSLPNVNPDAG
YAVQMSVEESLNDTQLVSFQSALLYTSSKGERRIRVHTLCLPVVSTLNEVFLGADVQAIS
GLLANMAVDRSVTASLSDARDALVNAVIDSLSAYRSSVLSNQQHGLMVPFSLRLFPLFVL
ALLKQKSFQTGTNACLDERIFAMCQVKNQPLVYLMLTTHPSLYRVDNLSDEGAININDRT
IPQPPILQLSVEKLSRDGAFLMDAGSVLMLWVGRNCRQNFLSQVLGVENYALIPQTMTDL
PELDTPESARTIAFISWLREQRPFYPILYVIRDESPMKANFLQNMVEDRTESALSYYEFL
LHIQQQVNK
NT seq
3270 nt
NT seq
+upstream
nt +downstream
nt
atgtcccagcccgggataccggcctctggcggcacccccatcggcctccaggcccagaac
ggggccgcccgggcctcggggtctccctacactaacggtcctgtccaaaatgcactgatg
tcttcacaagtgtcagtgagccaaggatataattctcagcttccaggatcctaccctcat
ctaataccagcaaagactttgaatccagtctctggacagtctaactctggtggttcccag
actgtttctccactaagtaattatcagggacctggacagactgtttatagaccatctgtg
gcttctaatccagtgacaccttcactccgtagtggtcctgttccccaaatgccactacct
acttctcagaacccagctgctacaccaatgccttctggtagctttcttcctggagccaac
ataccaccacccttgaattggcaatataactattcgtcacagacaaaccattgtcctcgt
gcatcatcccaaccgaccatgtctgggaatgcaaatttgacaactcctcaatatgtttct
tctggagatgcttcacttcaaaacaacttcataaaatcaggatctgcaccccccttagtg
aatacacctctgcctaccacttttcaaccaggagctcctcttgggccccctccaactgga
gcaccacctccagtgagggcccttacgcctcagaaatcaacacatagagctgtgccccag
cccacctttaattcagctagcaaccaagaaggtattataccaaataccaataatggatct
atggtggttcacaatagttatgatgaaattgaaggcggtggcttcttggcaacaccacag
cttactaataagaatcctacaatgagccgaagtgttggatattcatatccctccttacca
cctggttatcagagcacaataccacctagtacaacaggaatgccaccctcttccttgaat
tatccaagtggtccacaggcatttactcagactcctttaggtgctaatcatttacctgca
agcatgagtggattaagtctacatccagaggggctaagggttatcaatctacttcaagaa
agaaacatgcttccattgacacctttgcagcctcctgttccaaatttgcatgaagatatt
cagaaactcaactgtaacccagagttattccgatgcacactgactagcattcctcagact
caggccttactgaataaagccaaacttcctctgggactgctgcttcatccttttaaagac
ctagtgcaattgcctgtggttacctctagtacaattgtgagatgccgttcatgcaggaca
tacatcaacccttttgtcagctttcttgatcaaaggagatggaaatgtaacttatgttac
cgagtcaatgatgttcctgaagaattcatgtacaaccctttgaccagagtctatggagaa
cctcatagaagacctgaagttcaaaatgctactattgagtttatggctccttcagaatac
atgttacgaccacctcaacctccagtgtacctttttgtatttgatgtgtctcacaatgca
gttgaaactggatacttgaattcagtttgccagagtttgttagacaatctggatttgctt
cctggcaacactaggacaaaaattggcttcataacatttgatagtacaatccacttctac
agccttcaagaaggtctatctcaacctcagatgctaatagtttcagatattgaagatgtt
tttatacctatgccagagaacttattagtaaatttaaatgaaagtaaagagctcgtccaa
gatttactgaaaactttgccgcaaatgttcaccaagaccctggagacccagagtgccttg
ggtccagcccttcaggctgcctttaagctgatgtccccaactggtggtcgaatgtctgtt
tttcaaacacaactcccaactcttggagtgggagccctgaaaccacgagaggaacccaac
cagaggtcatctgctaaggttagaaagtcattaagtgcatgataagatttatgctggtgc
tttttactctggtgtagtaatagtagttaatggcagaatttaaaaggagtatgtggttgt
atttctcggtattcagcaggtagtgtctattattatccctcttatcaccatcagcacaac
ccagtgcaagtgcagaaattacagaaggaactacagagatacctcactcggaagattggc
tttgaggccgtcatgaggattcggtgcaccaaaggtctttccattcatactttccatggg
aacttctttgttcggtccacagacttactgtctttacctaatgtaaacccagatgctggg
tatgcagtacaaatgtcagtggaagagagtcttaatgacactcagttggtttcctttcag
tcagcactcttgtatacatccagcaaaggtgaaagaagaattcgtgttcatactttgtgt
ttgccagtagtttcaactctaaatgaagtctttcttggagctgatgttcaagcaatttca
gggttattggccaatatggctgttgacaggtctgtgactgccagtctgagtgatgctcgg
gacgccctagtgaatgctgtcatagactctctttcagcttatcgttcttcagtcctaagt
aaccagcagcatggacttatggttcctttttctttgcggcttttcccactgtttgtgttg
gctctccttaaacagaaatcatttcagactgggacaaatgcatgtctagatgaacgcatt
tttgctatgtgtcaagtgaaaaatcagcctttggtttaccttatgctcacaactcatccc
agtttgtatagagttgacaatctctcagatgagggtgcaatcaacatcaatgatcgcact
atacctcagccacctattcttcagctttcagtggagaagctgagcagggatggagctttc
ctcatggatgcaggctctgtactaatgctttgggttggaagaaattgtcgacagaatttt
ctcagtcaagttctaggagttgaaaactatgcattaattccacagactatgacagacctt
ccagaacttgatacaccagaatctgccagaacaatagctttcatctcttggcttagagaa
cagagaccattttacccaatactttatgtaataagggatgagagtccaatgaaagcaaac
ttccttcaaaacatggtagaagacagaacagaatctgcattatcatattatgaattcctc
ttgcatatacaacagcaagtgaataaatga
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