Phocoena phocoena (harbor porpoise): 136120023
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Entry
136120023 CDS
T11058
Name
(RefSeq) protocadherin beta-15-like
KO
K16494
protocadherin beta
Organism
pphc Phocoena phocoena (harbor porpoise)
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pphc04515
]
136120023
Cell adhesion molecules [BR:
pphc04515
]
Cadherins
Protocadherins
136120023
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
API5
Motif
Other DBs
NCBI-GeneID:
136120023
NCBI-ProteinID:
XP_065729508
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Position
3:118670149..118672530
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AA seq
793 aa
AA seq
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MEAGGERFPKQRQVLILFLLLGVALAGWESRRYFVMEETESGSFVANLAKDLGLGVEELA
AREARVVSEDNEPWLQLDLQTGELILSEKLDREEMCGPTDPCVMHFQVLLKKPLGVFRGE
LLVRDINDHSPEFPEREMTLKILETSPPGTVFPLKTAQDWDVGKNNIQNYNISHNSYFHV
STRNWGDGRKYPELVLDKELDREEQAELRLTLTALDGGSPPRSGTAQVRILVLDVNDNAP
EFAQTHYQVQVPENSPVGTLVVKVSARDLDTGTNGEISYSLFYSSQEISTTFELSSISGE
VRLIKKLDFETISSYELYIDASDGGGLSGKCSVSIEVMDVNDNSPELTISSLTSPIPENS
PETEVALFRIRDRDSGDNGRMTCSIQNDLPFLLKPSAENFYTLVTNGALDRESKAQYNIT
ITVTDMGTPRLKTEHNITVLVSDVNDNAPAFTQTSYTLSVRENNSPALHIGSVRATDRDE
GANAQVTYSLLPTLDPHVPLASLVSINPDNGHLFALRSLDYEALRAFEFRVGAADRGSPA
LSSQALVRVLVVDDNDNAPFVLYPLQNASAPCTELVPRAAEAGYLVTKVVAVDGDSGQNA
WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPLSASVTLHV
LLVDGFSQPYLPAPEAEAVDAAPAAPLTIYLVVALASVSSLFVFSVLVFVAVRLCRRGGA
ASVGRCSVPEGPFPGHLVDVSGTGTLSQSYQYEVCLTGGSGSNEFKFLKPVFPNILESDL
GRKSERSSTFQNS
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atggaggccggaggggagcgctttcctaaacaaaggcaagtcctgattctctttctcttg
ctgggagtggctcttgcaggctgggaatcccgtcgctatttcgtgatggaggaaactgag
agcggctcctttgtggccaatcttgctaaggacctggggctgggagtggaggagctagct
gcgcgagaagcccgggtggtctccgaggacaacgaaccctggttgcagcttgatctacag
actggggagttgatattaagtgagaaactggaccgggaggagatgtgcggacccacagat
ccatgtgtaatgcatttccaagtgttactgaaaaaaccactgggagtatttcgaggtgag
ctactggtgagagacataaacgatcattctcctgagtttcctgaaagagaaatgacgctg
aaaatcctagagactagccctcctgggaccgtgtttcctctgaaaacagcccaggattgg
gacgtgggcaaaaacaacatccaaaactacaatatcagtcacaactcttacttccatgtt
tccacccgcaactggggggacggcaggaaatacccagagctggtgctggacaaagagctg
gatcgcgaagagcaggccgagctcagattaaccctcacagcgctggatggcggctctccg
cccaggtctggcaccgcccaggtccgaatcttggtcttggacgttaatgacaacgcccct
gagtttgcacagacgcactaccaggtgcaggtcccagagaacagtcctgtaggcacccta
gttgtcaaggtctccgctagggatttggacactggaacaaacggagagatatcatattcc
cttttttatagttctcaagagataagcacaacttttgagctaagcagcatttcaggagaa
gttcgactaattaaaaaactagattttgagacaatatcctcatatgagctgtatatagat
gcgtctgatggtgggggactttctggaaaatgctctgtctccattgaggtgatggatgtt
aatgataactccccagaactaactatttcatcacttaccagccccattcctgaaaattcc
cccgagacagaagtggccctgtttaggattcgagaccgagactcaggggacaacggaagg
atgacttgctccatccagaatgatctccccttcctcctgaaaccatctgcggagaatttc
tacaccctagtaacaaatggggcgctggacagagagagtaaagcccaatataatatcact
atcaccgtcacagatatggggacaccgagactgaaaaccgagcacaacataaccgtgctg
gtgtccgacgtcaacgacaacgcccccgccttcacccaaacctcctacaccctgtccgtc
cgcgagaacaacagccccgccctgcacatcggcagcgtccgcgccacagacagagacgag
ggcgccaacgcccaggtcacctactcgctgctgccgaccctcgacccgcacgtgcccctg
gcctccctggtgtccatcaacccggacaacggccacctgttcgccctgaggtccctggac
tacgaggccctaagggcgttcgagttccgcgtgggcgccgccgaccgcggctcgcccgcg
ctcagcagccaggcgctggtgcgcgtgctcgtggtggacgacaacgacaacgcgcctttc
gtgctgtacccgctgcagaacgcctcggcgccctgcaccgagctggtgcccagggcggcc
gaggcgggttacctggtgaccaaggtggtggcggtggacggcgactcgggccagaacgcc
tggctgtcgtaccagctgctcaaggccacggagcccggcctgttcggcgtgtgggcgcac
aacggtgaggtgcgcacggcccggctgctgagcgagcgcgatgcggccaagcacaggctg
gtggtgctggtcaaggacaacggcgagccgccgctctcggccagcgtcacgctgcacgtg
ctgctggtggacggcttctcgcagccctacctgccggccccggaagcggaagcggtggac
gcggccccggccgcccctctcaccatctacctggtggtggccttggcgtcggtgtcgtcg
ctcttcgtcttctcggtgctggtgttcgtcgcggtgcggctgtgcaggaggggcggggcg
gcctcggtgggtcgctgctcggtgcccgagggcccctttccgggccacctggtggacgtc
agcggcacggggaccctgtcccagagctaccagtacgaggtgtgtctgactggaggctct
gggagtaatgagttcaaattcttgaagcctgtcttccccaatattctggaatcggacctt
gggaggaagtcagaaagaagttcaaccttccagaatagttag
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