KEGG   Phocoena phocoena (harbor porpoise): 136120043
Entry
136120043         CDS       T11058                                 
Symbol
PCDHB16
Name
(RefSeq) protocadherin beta-16
  KO
K16494  protocadherin beta
Organism
pphc  Phocoena phocoena (harbor porpoise)
Brite
KEGG Orthology (KO) [BR:pphc00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:pphc04515]
    136120043 (PCDHB16)
Cell adhesion molecules [BR:pphc04515]
 Cadherins
  Protocadherins
   136120043 (PCDHB16)
SSDB
Motif
Pfam: Cadherin Cadherin_2 Cadherin_C_2 Cadherin_CELSR2_9th VWA_3_C API5
Other DBs
NCBI-GeneID: 136120043
NCBI-ProteinID: XP_065729552
LinkDB
Position
3:118644131..118646530
AA seq 799 aa
MEIGWMHNPRQRQVLVFFVLLSMYGASAELGPYSVVEETERGSFVANVGKDLGLGLTEMS
TRGARIISQWNKEHLQLKVQTGDLLINDKLDREKLCGPSEPCILHFQVLMEKPLEIFQAE
LRVKDINDHSPVFTEREMFLKIPENSPIGISFPLSNALDLDVGSNNVQNYKISPNSHFRV
LTQNRSDGRKYPELVLDKELDREEEPEISLTLTALDGGSPPRYGTAQVRIEVVDTNDNAP
EFEQSLYKVHIPEDSPVGSLVVTVSASDVDSGVYGKISYAFFQPSEDISKTLEVNPMTGE
IRLRKKVDFETVLSYEVDIKATDGGGLSGKCTLLLQVVDVNDNPPEVTVSALTTPIPENS
PDIVVAVFSVSDPDSGDNGKTISSIQDDLPFLLKPSVKNFYTLVTQKTLDREERAEYNIT
ITVTDMGTPRLKTEHNITVLVSDVNDNAPAFTQTSYTLSVRENNSPALHIGSVRATDRDE
GANAQVTYSLLPTLDAHVPLASLVSINPDNGHLFALRSLDYEALRAFEFRVGAADRGSPA
LSSQALVRVLVVDDNDNAPFVLYPLQNASAPCTELVPRAAEAGYLVTKVVAVDGDSGQNA
WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPLSASVTLHV
LLVDGFSQPYMPAPEAEAADAAPTAPLTAYLVVALASVSSLFLFSVLAFVAVRLCRSGGA
ASVGRCSVPEGPFPGHLVDVSGTGTLSQSYQYEVCLTGGSGSNEFKFLKPILPNLPPQCP
GKEIEENRTFYNTFGFNIQ
NT seq 2400 nt   +upstreamnt  +downstreamnt
atggagattggatggatgcacaatccgagacaaaggcaagtcctagttttctttgttttg
ctgagcatgtatggggcgagcgcagagttggggccctattcagtagtggaagaaacagaa
agaggctcctttgtggcaaatgtaggaaaagacctggggctggggttgacagagatgtcc
acccgcggtgcccggatcatttcccagtggaacaaagagcatttgcagctcaaggttcag
actggggatttgctcataaatgacaaactagatcgagagaagctatgcggtccgagtgag
ccttgcatactacatttccaagtattaatggaaaaaccgttagagatatttcaggcagaa
ctgagagtgaaagacataaatgaccattcccccgtgttcactgaaagagaaatgtttcta
aaaataccggaaaacagtcctataggaatttcattccctctgagtaatgctctggacttg
gatgtaggcagcaacaatgttcagaactataaaatcagccccaactcccattttcgggtt
ctaacccaaaatcgcagcgatggcagaaaataccctgagctggtgttggacaaagagctg
gatcgggaggaggagcctgaaatatcattaaccctgacagcgctggatggcggctctccg
cctcggtatggaaccgcccaggtgcgcattgaagtggtggacactaacgataacgcccct
gagtttgagcagtccctctacaaggtgcatattcccgaagacagccccgtaggctccctg
gttgtcactgtctctgccagcgatgtagacagtggagtctatgggaaaatatcatacgca
ttctttcagccttcagaagatattagtaaaactttggaggtaaatcctatgacaggtgaa
attcgactgagaaaaaaagttgattttgaaacagttctgtcttatgaagtggacatcaag
gccactgatgggggaggtctttcaggaaaatgcactcttctcctgcaagtagtggatgtg
aatgacaatcctccagaagtgacagtgtctgcactcaccactcccatcccagagaactct
cctgacattgtagttgctgttttcagtgtttcagatcctgactctggggacaatgggaaa
actatttcctccatccaggatgaccttccttttcttctaaaaccttcagtcaagaacttt
tacaccttagtaacccagaaaacactagatagagaagaaagagccgagtacaacatcacc
atcaccgtcacagatatgggaacccccaggctgaaaaccgagcacaacataaccgtgctg
gtgtccgacgtcaacgacaacgcccccgccttcacccagacctcctacaccctgtccgtc
cgcgagaacaacagccccgccctgcacatcggcagcgtccgcgccacagacagagacgag
ggcgccaacgcccaggtcacctactcgctgctgccgaccctcgacgcgcacgtgcccctg
gcctccctggtgtccatcaacccggacaacggccacctgttcgccctgaggtccctggac
tacgaggccctgcgggcgttcgagttccgcgtgggcgccgccgaccgcggctcgcccgcg
ctcagcagccaggcgctggtgcgcgtgctcgtggtggacgacaacgacaacgcgcccttc
gtgctgtacccgctgcagaacgcctcggcgccctgcaccgagctggtgcccagggcggcc
gaggcgggctacctggtgaccaaggtggtggcggtggacggcgactcgggccagaacgcc
tggctgtcgtaccagctgctcaaggccacggagcccggcctgttcggcgtgtgggcgcac
aatggcgaggtgcgcacggcccggctgctgagcgagcgcgacgcggccaagcacaggctg
gtggtgctggtcaaggacaacggcgagccgccgctctcggccagcgtcacgctgcacgtg
ctgctggtggacggcttctcgcagccctacatgccggccccggaagcggaagcggcggac
gcggccccgaccgcccctctcaccgcctacctggtggtcgccttggcgtcggtgtcgtcg
ctcttcctcttctcggtgctggcgttcgtcgcggtgcggctgtgcaggagcggcggggcg
gcctcggtgggtcgctgctcggtgcccgagggcccctttccgggccacctggtggacgtc
agcggcacggggaccctgtcccagagctaccagtacgaggtgtgtctgactggaggctct
ggaagtaatgagttcaaattcttgaagccgattctccccaacctcccgccccaatgccct
gggaaggaaatagaagaaaatcgtaccttctacaatacctttgggttcaatattcagtga

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