Phocoena phocoena (harbor porpoise): 136120043
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Entry
136120043 CDS
T11058
Symbol
PCDHB16
Name
(RefSeq) protocadherin beta-16
KO
K16494
protocadherin beta
Organism
pphc Phocoena phocoena (harbor porpoise)
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pphc04515
]
136120043 (PCDHB16)
Cell adhesion molecules [BR:
pphc04515
]
Cadherins
Protocadherins
136120043 (PCDHB16)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
VWA_3_C
API5
Motif
Other DBs
NCBI-GeneID:
136120043
NCBI-ProteinID:
XP_065729552
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All DBs
Position
3:118644131..118646530
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AA seq
799 aa
AA seq
DB search
MEIGWMHNPRQRQVLVFFVLLSMYGASAELGPYSVVEETERGSFVANVGKDLGLGLTEMS
TRGARIISQWNKEHLQLKVQTGDLLINDKLDREKLCGPSEPCILHFQVLMEKPLEIFQAE
LRVKDINDHSPVFTEREMFLKIPENSPIGISFPLSNALDLDVGSNNVQNYKISPNSHFRV
LTQNRSDGRKYPELVLDKELDREEEPEISLTLTALDGGSPPRYGTAQVRIEVVDTNDNAP
EFEQSLYKVHIPEDSPVGSLVVTVSASDVDSGVYGKISYAFFQPSEDISKTLEVNPMTGE
IRLRKKVDFETVLSYEVDIKATDGGGLSGKCTLLLQVVDVNDNPPEVTVSALTTPIPENS
PDIVVAVFSVSDPDSGDNGKTISSIQDDLPFLLKPSVKNFYTLVTQKTLDREERAEYNIT
ITVTDMGTPRLKTEHNITVLVSDVNDNAPAFTQTSYTLSVRENNSPALHIGSVRATDRDE
GANAQVTYSLLPTLDAHVPLASLVSINPDNGHLFALRSLDYEALRAFEFRVGAADRGSPA
LSSQALVRVLVVDDNDNAPFVLYPLQNASAPCTELVPRAAEAGYLVTKVVAVDGDSGQNA
WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPLSASVTLHV
LLVDGFSQPYMPAPEAEAADAAPTAPLTAYLVVALASVSSLFLFSVLAFVAVRLCRSGGA
ASVGRCSVPEGPFPGHLVDVSGTGTLSQSYQYEVCLTGGSGSNEFKFLKPILPNLPPQCP
GKEIEENRTFYNTFGFNIQ
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atggagattggatggatgcacaatccgagacaaaggcaagtcctagttttctttgttttg
ctgagcatgtatggggcgagcgcagagttggggccctattcagtagtggaagaaacagaa
agaggctcctttgtggcaaatgtaggaaaagacctggggctggggttgacagagatgtcc
acccgcggtgcccggatcatttcccagtggaacaaagagcatttgcagctcaaggttcag
actggggatttgctcataaatgacaaactagatcgagagaagctatgcggtccgagtgag
ccttgcatactacatttccaagtattaatggaaaaaccgttagagatatttcaggcagaa
ctgagagtgaaagacataaatgaccattcccccgtgttcactgaaagagaaatgtttcta
aaaataccggaaaacagtcctataggaatttcattccctctgagtaatgctctggacttg
gatgtaggcagcaacaatgttcagaactataaaatcagccccaactcccattttcgggtt
ctaacccaaaatcgcagcgatggcagaaaataccctgagctggtgttggacaaagagctg
gatcgggaggaggagcctgaaatatcattaaccctgacagcgctggatggcggctctccg
cctcggtatggaaccgcccaggtgcgcattgaagtggtggacactaacgataacgcccct
gagtttgagcagtccctctacaaggtgcatattcccgaagacagccccgtaggctccctg
gttgtcactgtctctgccagcgatgtagacagtggagtctatgggaaaatatcatacgca
ttctttcagccttcagaagatattagtaaaactttggaggtaaatcctatgacaggtgaa
attcgactgagaaaaaaagttgattttgaaacagttctgtcttatgaagtggacatcaag
gccactgatgggggaggtctttcaggaaaatgcactcttctcctgcaagtagtggatgtg
aatgacaatcctccagaagtgacagtgtctgcactcaccactcccatcccagagaactct
cctgacattgtagttgctgttttcagtgtttcagatcctgactctggggacaatgggaaa
actatttcctccatccaggatgaccttccttttcttctaaaaccttcagtcaagaacttt
tacaccttagtaacccagaaaacactagatagagaagaaagagccgagtacaacatcacc
atcaccgtcacagatatgggaacccccaggctgaaaaccgagcacaacataaccgtgctg
gtgtccgacgtcaacgacaacgcccccgccttcacccagacctcctacaccctgtccgtc
cgcgagaacaacagccccgccctgcacatcggcagcgtccgcgccacagacagagacgag
ggcgccaacgcccaggtcacctactcgctgctgccgaccctcgacgcgcacgtgcccctg
gcctccctggtgtccatcaacccggacaacggccacctgttcgccctgaggtccctggac
tacgaggccctgcgggcgttcgagttccgcgtgggcgccgccgaccgcggctcgcccgcg
ctcagcagccaggcgctggtgcgcgtgctcgtggtggacgacaacgacaacgcgcccttc
gtgctgtacccgctgcagaacgcctcggcgccctgcaccgagctggtgcccagggcggcc
gaggcgggctacctggtgaccaaggtggtggcggtggacggcgactcgggccagaacgcc
tggctgtcgtaccagctgctcaaggccacggagcccggcctgttcggcgtgtgggcgcac
aatggcgaggtgcgcacggcccggctgctgagcgagcgcgacgcggccaagcacaggctg
gtggtgctggtcaaggacaacggcgagccgccgctctcggccagcgtcacgctgcacgtg
ctgctggtggacggcttctcgcagccctacatgccggccccggaagcggaagcggcggac
gcggccccgaccgcccctctcaccgcctacctggtggtcgccttggcgtcggtgtcgtcg
ctcttcctcttctcggtgctggcgttcgtcgcggtgcggctgtgcaggagcggcggggcg
gcctcggtgggtcgctgctcggtgcccgagggcccctttccgggccacctggtggacgtc
agcggcacggggaccctgtcccagagctaccagtacgaggtgtgtctgactggaggctct
ggaagtaatgagttcaaattcttgaagccgattctccccaacctcccgccccaatgccct
gggaaggaaatagaagaaaatcgtaccttctacaatacctttgggttcaatattcagtga
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