Phocoena phocoena (harbor porpoise): 136120096
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Entry
136120096 CDS
T11058
Symbol
CDK7
Name
(RefSeq) cyclin-dependent kinase 7 isoform X1
KO
K02202
cyclin-dependent kinase 7 [EC:
2.7.11.22
2.7.11.23
]
Organism
pphc Phocoena phocoena (harbor porpoise)
Pathway
pphc03022
Basal transcription factors
pphc03420
Nucleotide excision repair
pphc04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
136120096 (CDK7)
09124 Replication and repair
03420 Nucleotide excision repair
136120096 (CDK7)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
136120096 (CDK7)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
pphc01001
]
136120096 (CDK7)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pphc03021
]
136120096 (CDK7)
03019 Messenger RNA biogenesis [BR:
pphc03019
]
136120096 (CDK7)
03400 DNA repair and recombination proteins [BR:
pphc03400
]
136120096 (CDK7)
Enzymes [BR:
pphc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.22 cyclin-dependent kinase
136120096 (CDK7)
2.7.11.23 [RNA-polymerase]-subunit kinase
136120096 (CDK7)
Protein kinases [BR:
pphc01001
]
Serine/threonine kinases: CMGC group
CDK family
136120096 (CDK7)
Transcription machinery [BR:
pphc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
136120096 (CDK7)
Messenger RNA biogenesis [BR:
pphc03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Capping factors
136120096 (CDK7)
DNA repair and recombination proteins [BR:
pphc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
136120096 (CDK7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
Kinase-like
ABC1
Seadorna_VP7
Haspin_kinase
APH
Pkinase_fungal
Motif
Other DBs
NCBI-GeneID:
136120096
NCBI-ProteinID:
XP_065729682
LinkDB
All DBs
Position
3:55872494..55900189
Genome browser
AA seq
346 aa
AA seq
DB search
MAVDVKSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTAL
REIKLLQELSHPNIIGLLDAFGHKSNISLVFDFMETDLEVIIRDNSLVLTPSHIKAYMLM
TLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYTHQVVTRWYRA
PELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDM
CSLPDFVTFKSFPGIPLQHIFIAAGDDLLDLIQGLFLFNPCTRITATQALKTKYFSNRPG
PTPGCQLPRPNCPVDALKEQSNPAMATKRKRTEALEQGGLPKKLIF
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atggctgtggacgtgaagtcgcgagcaaagcgttatgaaaaactggacttcctcggcgag
ggacagtttgccacggtttacaaggccagagacaagaacaccaaccaaattgtcgccatt
aagaaaatcaaacttggacatagatcagaagctaaagatggtataaatagaacagcttta
agagagataaaattattacaggagctaagtcatccaaatataattggtctccttgatgct
tttggacataaatctaatattagccttgtctttgattttatggaaactgacctagaggtt
ataataagagataacagtcttgtgctgacaccatcacacatcaaagcctacatgttgatg
actcttcaaggattagaatatttacatcaacactggattctacatagggacctaaaacca
aacaacttgttgctagatgaaaatggagttctaaaactggcagattttggcctggccaaa
tcatttgggagccccaatagagcttatacacatcaggttgtaaccaggtggtatcgggcc
cctgagctactatttggagctagaatgtatggtgtaggtgtggacatgtgggctgttggc
tgtatattagcagagttgctcctaagggttccttttttgccaggagattcagaccttgat
caactaacaagaatatttgaaactttgggcacaccaactgaagaacagtggcctgacatg
tgtagtcttccagatttcgtgacatttaagagtttccctggaatcccgttacagcatatc
ttcattgcagcaggagatgacttgctagatcttatacaaggcttattcttatttaatccg
tgtactcgaattacagccacacaggcattgaaaactaagtatttcagtaatcggccaggg
ccaacacctggatgtcagctgccaagaccaaactgtccagtggacgctttaaaggagcag
tccaatccagccatggcaacaaaacggaagagaacagaggccttggaacaaggaggatta
cccaagaagctaattttttag
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