Phocoena phocoena (harbor porpoise): 136120187
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Entry
136120187 CDS
T11058
Symbol
GRIA1
Name
(RefSeq) glutamate receptor 1 isoform X1
KO
K05197
glutamate receptor 1
Organism
pphc Phocoena phocoena (harbor porpoise)
Pathway
pphc04024
cAMP signaling pathway
pphc04080
Neuroactive ligand-receptor interaction
pphc04082
Neuroactive ligand signaling
pphc04713
Circadian entrainment
pphc04720
Long-term potentiation
pphc04723
Retrograde endocannabinoid signaling
pphc04724
Glutamatergic synapse
pphc04728
Dopaminergic synapse
pphc04730
Long-term depression
pphc05014
Amyotrophic lateral sclerosis
pphc05016
Huntington disease
pphc05017
Spinocerebellar ataxia
pphc05022
Pathways of neurodegeneration - multiple diseases
pphc05031
Amphetamine addiction
pphc05033
Nicotine addiction
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04024 cAMP signaling pathway
136120187 (GRIA1)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
136120187 (GRIA1)
04082 Neuroactive ligand signaling
136120187 (GRIA1)
09150 Organismal Systems
09156 Nervous system
04724 Glutamatergic synapse
136120187 (GRIA1)
04728 Dopaminergic synapse
136120187 (GRIA1)
04720 Long-term potentiation
136120187 (GRIA1)
04730 Long-term depression
136120187 (GRIA1)
04723 Retrograde endocannabinoid signaling
136120187 (GRIA1)
09159 Environmental adaptation
04713 Circadian entrainment
136120187 (GRIA1)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
136120187 (GRIA1)
05016 Huntington disease
136120187 (GRIA1)
05017 Spinocerebellar ataxia
136120187 (GRIA1)
05022 Pathways of neurodegeneration - multiple diseases
136120187 (GRIA1)
09165 Substance dependence
05031 Amphetamine addiction
136120187 (GRIA1)
05033 Nicotine addiction
136120187 (GRIA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pphc04040
]
136120187 (GRIA1)
Ion channels [BR:
pphc04040
]
Ligand-gated channels
Glutamate (ionotropic)
136120187 (GRIA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ANF_receptor
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
DUF659
DUF2061
Motif
Other DBs
NCBI-GeneID:
136120187
NCBI-ProteinID:
XP_065729733
LinkDB
All DBs
Position
3:130140443..130445251
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AA seq
906 aa
AA seq
DB search
MQHIFAFFCTGFLGAVVGANFPNNIQIGGLFPNQQSQEHAAFRFALSQLTEPPKLLPQID
IVNISDSFEMTYRFCSQFSKGVYAIFGFYERRTVNMLTSFCGALHVCFITPSFPVDTSNQ
FVLQLRPELQDALISIIDHYKWQKFVYIYDADRGLSVLQKVLDTAAEKNWQVTAVNILTT
TEEGYRMLFQDLEKKKERLVVVDCESERLSAILGQIVKLEKNGIGYHYILANLGFMDIDL
NKFKESGANVTGFQLVNYTDTIPARIMQQWKNSDARDHTRVDWKRPKYTSALTYDGVKVM
AEAFQSLRRQRIDISRRGNAGDCLANPAVPWGQGIDIQRALQQVRFEGLTGNVQFNEKGR
RTNYTLHVIEMKHDGIRKIGYWNEDDKFVPAATDAQAGGDNSSVQNRTYIVTTILEDPYV
MLKKNANQFEGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGKYGARDPDTKAWNGMVGE
LVYGRADVAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIW
MCIVFAYIGVSVVLFLVSRFSPYEWHSEEFEEGRDQTTSDQSNEFGIFNSLWFSLGAFMQ
QGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIA
YGTLEAGSTKEFFRRSKIAVFEKMWTYMKSAEPSVFVRTTEEGMIRVRKSKGKYAYLLES
TMNEYIEQRRPCDTMKVGGNLDSKGYGIATPKGSALRGPVNLAVLKLSEQGVLDKLKSKW
WYDKGECGSKDSGSKDKTSALSLSNVAGVFYILIGGLGLAMLVALIEFCYKSRSESKRMK
GFCLIPQQSINEAIRTSTLPRNSGAGASGGGSGENGRVVSHDFPKSMQSIPCMSHSSGMP
LGATGL
NT seq
2721 nt
NT seq
+upstream
nt +downstream
nt
atgcagcacatttttgccttcttctgcaccggtttcctaggcgcggtagtaggtgccaat
ttccccaacaatatccagatcgggggattatttccaaaccagcagtcacaggaacatgcc
gcttttagatttgctttgtcgcaactcacagagcccccaaagctgctcccccagattgat
attgtgaacatcagtgacagctttgagatgacctacagattctgttcccagttctctaaa
ggagtctatgccatctttgggttttatgaacggaggactgtcaacatgctgacctccttc
tgcggggccctccacgtctgcttcattacaccgagctttcctgttgacacatccaaccag
tttgtccttcagctgcgtcccgagctgcaggatgccctcatcagtatcatcgaccattac
aagtggcaaaaatttgtctacatttatgatgctgaccggggtctgtccgtcctgcagaaa
gtcctagacacagcggccgagaagaactggcaggtgacagccgtcaacattttgacaacc
acagaggagggataccggatgctcttccaggacctggagaagaaaaaggagaggctggtg
gtggtggactgtgaatccgagcgcctcagtgctatcctgggccagattgtaaagctggag
aagaacggcattggctaccactatatccttgcaaatctgggtttcatggacattgactta
aacaaattcaaggagagtggagcaaacgtaacaggtttccagttggtgaactacacagac
accatcccggccaggatcatgcagcagtggaaaaacagtgatgctcgggaccacacccgg
gtggactggaagagacctaagtacacctctgcgctcacctacgatggggtgaaggtgatg
gctgaggctttccagagcctgcggaggcagagaatcgatatctctcgccgggggaatgct
ggggactgcctggctaacccagctgtgccctggggccagggcatcgacatccagagagct
ctgcagcaggtgcggtttgaaggcttgacaggaaatgtacaatttaatgagaaaggacgc
cggaccaactacaccctccatgtgatcgaaatgaagcacgatggcatccgaaagattggc
tactggaatgaagatgataagtttgtccctgcagccacggatgctcaagccgggggggat
aactcaagtgtccagaatagaacgtacatcgtcactacaatcctagaggacccttatgtg
atgctcaagaagaatgccaaccagtttgaaggcaatgaccgctacgagggctactgcgtg
gagctggcagcagagattgccaagcacgtgggctactcctaccgtcttgagatcgtcagc
gatgggaaatatggagcccgcgaccctgacacaaaggcttggaatggcatggtgggagag
ctggtctatggaagagcagatgtggccgtggcccctttaactatcaccttggtccgggaa
gaggtgatagatttctccaaaccatttatgagtttggggatctccatcatgataaaaaag
ccacagaagtccaagccaggggtcttctccttcctggatcctttggcttatgagatttgg
atgtgtattgttttcgcctacattggagtgagtgttgtccttttcctggtcagccgcttc
agcccctacgaatggcacagtgaagagtttgaggaagggcgggaccagacaaccagtgac
cagtccaatgagtttgggatattcaacagcttgtggttctccttgggagccttcatgcag
caaggatgtgacatttctccaaggtccctgtctggccgcatcgttggcggcgtctggtgg
ttcttcaccttgatcatcatctcctcctacacagccaacctggccgccttcctgaccgtg
gagaggatggtatctcccattgagagtgccgaggacctagcgaagcagacagaaatcgct
tacgggaccctagaagcgggatccacgaaggagttcttcaggaggtctaaaatcgctgtg
tttgagaagatgtggacgtacatgaagtcagcagaaccatccgtgtttgtgcggaccacg
gaggaggggatgatccgagtaaggaaatccaaaggcaaatacgcctaccttctagagtcc
accatgaatgagtatattgagcaacggagaccctgtgacaccatgaaagtgggaggtaac
ttggattccaaaggctatggcattgcgacgcccaaggggtccgccctaagaggtcccgta
aacctagcggttttgaaactcagtgagcaaggcgtcttagacaagctgaaaagcaaatgg
tggtacgataaaggggaatgtggaagcaaggactccggaagtaaggacaagacaagcgct
ctgagcctcagcaatgtggccggcgtgttctacatcctgatcggaggacttggactagcc
atgctggttgccttaatcgagttctgctacaaatcgcgtagcgaatccaagcggatgaag
ggtttctgtttgatcccacagcaatccatcaacgaagccatacggacatcgacactcccc
cgaaacagcggggcaggagccagtggtggcggtagtggagagaacggccgggtggtcagc
catgacttccccaagtccatgcaatcgatcccctgcatgagccacagttcagggatgccc
ttgggagccaccggattgtaa
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