Phocoena phocoena (harbor porpoise): 136120256
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Entry
136120256 CDS
T11058
Name
(RefSeq) protocadherin alpha-6-like
KO
K16493
protocadherin alpha
Organism
pphc Phocoena phocoena (harbor porpoise)
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pphc03036
]
136120256
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pphc04515
]
136120256
Chromosome and associated proteins [BR:
pphc03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
136120256
Cell adhesion molecules [BR:
pphc04515
]
Cadherins
Protocadherins
136120256
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_FAT4_N
Ig_Cad99C_N
Ig_CLSTN
Cadherin_C_2
Ig_BT4661_3rd
Motif
Other DBs
NCBI-GeneID:
136120256
NCBI-ProteinID:
XP_065729771
LinkDB
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Position
3:118243374..118247326
Genome browser
AA seq
818 aa
AA seq
DB search
MELNQQVFEMLITPEGRLRSRCLLLSLLLLAAWEAGSGQVRYSVPEEAKHGTFVGRIAQD
LGLELTELVPRLFRVASKGRGDLLEVNLQNGILFVNSRIDREELCGRSVECSIHLEVIVN
RPLQVFHVEVEVKDINDNPPVFPVKEQRVLISESRLPDSLFPLEGASDADVGSNSVLTYK
LSSNENFALDVKTNSDDSTQIGLVLRKSLDREEAPEHNLFLMATDQGKPELTATVQLLVT
VLDVNDNAPSFGQSEYEAKIFENSDNGTIVMRLNASDRDEGANGEFSYSFNSLVPSMVSN
QFRIDPNTGEIVIQGNLDFENINLYKIRIDATDKGHPPMAGHCTILVKVLDKNDNVPQIA
LTSLSLPVREDAHFGTVIALISVSDLDSGANGQVTCSLTPHVPFKLVSTFKNYYSLVLDS
ALDRESVANYEVVVTARDGGSPSLSATASVSVEVADVNDNAPAFAQPEYTVFVKENNPPG
CHIFTVSARDADAQENALVSYSLVERRVGERALSSYVSVHAESGKVYALQPLDHEELELL
QFQVSARDAGVPPLGSNVTLQVFVLDENDNAPALLLPGTGGGAGALSQLVARSVGAGHVV
AKVRAVDADSGYNAWLSYELQPAAGGERSPFRVGLYTGEISTTRALDEVDAPRQRLLVLV
KDHGEPALTATATVLLSLEDSGQAPKASSRASTGAAGAETALVDVNVYLIIAICAVSSLL
VLTLLLYTALRCSALPSEGARGPGKPTLVYSSAVGSWSYSQQRRQRVCSGERPPKTDLMA
FSPSLPACPVVVDMGELQDLNGDRLSKVSLNFHNYQKY
NT seq
2457 nt
NT seq
+upstream
nt +downstream
nt
atggaactaaaccagcaagtatttgaaatgcttattacacctgaaggccgactgagatcc
cggtgtttgcttctctcgcttctgctccttgcagcctgggaggcggggagcggccaggtc
cgctactccgtcccagaggaggccaaacacggcaccttcgtgggccgcatcgcccaggac
ctggggctggagctgacggagctggtgccgcgcctgttccgggtggcgtccaaaggccgc
ggggaccttctggaggtaaatctgcagaatggcattttgtttgtgaattctcggatcgac
cgggaggagctgtgcgggcggagcgtggagtgcagcatccacctggaggtgatcgtgaac
cggccgctgcaggtgttccatgtggaggtggaggtgaaggacattaacgacaacccgcct
gtgttcccggtaaaggaacaaagagtgttgatttccgaatctaggctgccagattcgttg
tttccactagagggcgcgtcggatgcagatgtgggctcaaattctgtcttaacctacaag
ctcagttccaacgaaaacttcgcgttagatgtgaaaacaaacagtgatgacagtacacaa
attgggctcgtgttaaggaaatcgttggacagagaggaagcgcccgaacataacttattc
ctcatggctactgaccaaggcaaacctgagctcactgccactgttcagctgctggtcacc
gtactggatgtgaatgacaatgctcccagttttggacagtcagagtatgaagcaaaaata
tttgaaaactcagataacggaacaatagttatgagactgaatgcttctgatagggatgaa
ggagcgaatggggagttttcatactcttttaatagtcttgttccatccatggttagtaac
cagtttagaatagatccaaatactggagaaatagtaattcaagggaatttagattttgaa
aatataaatttatacaaaatccgtattgatgcgacagacaaaggccacccacccatggct
ggtcattgcaccatcttggtgaaagttttggataaaaatgataatgtccctcagattgca
ctgacttccttatccttgcctgtccgagaggacgctcatttcggcactgtcattgcccta
attagcgtgtccgatctcgactcaggtgccaacgggcaggtgacctgctctctgacgccc
catgttcccttcaaactggtgtccaccttcaagaattactattcgctggtgctggacagc
gccttggatcgcgagagtgtggccaactatgaggtggtggtgactgcgagggacgggggc
tcgccttccctgtcggccacagccagcgtgtccgtggaggtggccgacgtgaacgacaac
gcgcccgcgttcgcgcagcccgagtacacggtgttcgtgaaggagaacaaccctcccggc
tgccacatcttcacggtgtcggcgcgggacgcggacgctcaggagaacgcgctggtgtcc
tactcgctggtggagcggcgggtgggcgagcgagcgctgtcgagctacgtgtcggtgcac
gcggagagcggcaaggtgtacgcgctgcagccgctggaccacgaggagctggagctgctg
cagttccaggtgagcgcgcgcgacgcgggcgtgccgcctctgggcagcaacgtgacgctg
caggtgttcgtgctggacgagaacgacaacgcacccgcactgctgctgcccgggacgggc
ggtggggcgggcgcactgagccagctggtggctcggtcggtgggcgcgggccacgtggtg
gcgaaggtgcgcgcggtggacgcggactcgggctacaacgcgtggctgtcgtacgagctg
cagccggcggcgggtggcgagcgcagcccgttccgcgtggggctgtacacgggcgagatc
agcacgacgcgcgccctggacgaggtcgacgctccgcgccagcgcctgctggtgctggtg
aaggaccacggcgagccggcgctgacggccacggccaccgtgctgctgtcgctggaggac
agcggccaggcgcccaaggcctcttcgcgggcttcgaccggcgccgctggagcggagacg
gcgttagtggatgtgaacgtgtacctaatcatcgccatctgcgcggtgtccagcttgttg
gtgctcacgctgctgctgtacacggcgctgcggtgctcggcgctgcccagcgagggcgcg
cgcgggcccgggaagcccacgctggtgtactccagcgcggtggggagctggtcttactcg
cagcagaggcggcagcgggtgtgctctggggagaggccgcccaagaccgacctcatggcc
ttcagccccagccttccagcttgtccagtagtggtggatatgggcgagcttcaggattta
aatggtgatcggctttccaaagtaagtctgaattttcataattaccagaagtattag
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