Phocoena phocoena (harbor porpoise): 136120618
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Entry
136120618 CDS
T11058
Symbol
SEC16B
Name
(RefSeq) protein transport protein Sec16B
KO
K20353
COPII coat assembly protein SEC16
Organism
pphc Phocoena phocoena (harbor porpoise)
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pphc04131
]
136120618 (SEC16B)
Membrane trafficking [BR:
pphc04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
136120618 (SEC16B)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Sec16
Sec16
Motif
Other DBs
NCBI-GeneID:
136120618
NCBI-ProteinID:
XP_065730192
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Position
1:complement(134348527..134370531)
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AA seq
625 aa
AA seq
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MKPWVPQWPPQPVGRPPSTSRDPDRGLQRDRYYRPIRHSWHNGERVQQEQDMGRSPQPQQ
DPGEDHQQPHYASRPGEWHPPVSRVDYYKGGYPSQLYSRPGIEDLYQSYHSPALREEYAY
GSYYYHGHPQQLREEGVPRQGSPYTWHEDYRDQKYLNEHQHENQNSPFGTNSETQFQSKR
WNPYKDSPASNSGQERPGDLFVESPLTGAQKNKPSLTEESNLLRQHESGLTSSSYELSQY
MTDASELYDPMAAAGWSPVQAEDISAAGPKTPMKFYIPHVPVSFGPGGQLVCVGPRSLSD
GQTALVELHSMEVILNDSEEQENMRTFSGPLIREDVHKVDIVTFCQQKAAQSRKSETPGS
RDSALLWQLLVLLCRQNGSVVGSDIAELLVQDCKKLEKYKRQPPVANLINLTDEDWPVLS
LGTRNLLTGEVPPSVETPAQIVEKFTKLLYYGRKKEALEWAMKNHLWGHALFLASKMDPR
TYSWVMSGFTSTLALNDPLQTLFQLMSGRIPQAATCCGDEQWGDWRPHLAVILSNQGGDP
ELYQRTIVTMGDTLAGKGLVEAAHFCYLMAHVPFGSYTVKTDHLALLGSSHRYAIFWGKG
SGKDIFQVIGLALAGLHGSIFHSLV
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgaagccttgggttccccagtggccgcctcagccagtggggaggcccccatcaacatca
agggatccagaccgagggcttcagagagatagatactatcggcctattcgtcactcttgg
cacaatggagagagggtccaacaagaacaagacatgggcaggagcccccaaccacagcag
gaccctggggaagaccaccagcagcctcactacgcgtccaggcctggggaatggcatccg
cctgtgtccagggttgactattataaaggtggttatcccagtcagttgtattcaaggccg
ggcattgaggatctctatcaaagctatcactctccagccctaagggaagaatatgcttat
ggaagttattactaccatggacacccgcagcagctgcgggaagaaggagtgccaaggcaa
gggagtccttatacctggcatgaagattatcgagatcaaaagtacctgaatgaacaccaa
catgaaaaccagaatagtccgtttggaacaaatagtgagacccagttccaatctaagcgt
tggaacccttataaagacagtcccgcttctaactctggacaggagaggcctggggactta
tttgtggagagtccgctaactggggcccagaaaaacaagccatcactgaccgaggaatcc
aaccttctccggcagcacgagtctggtctcacctccagcagctatgagctcagtcagtac
atgacagacgcctctgagctgtacgaccccatggctgcagcgggttggagtccagttcag
gctgaggacatctcggcagctggtcccaagacacccatgaagttctacatccctcacgtg
cctgtgagttttgggccaggaggtcagctggtgtgtgtgggtcccagatctctcagtgat
ggacagacggcccttgttgaactgcatagcatggaggttattcttaatgattctgaggaa
caagaaaatatgaggactttctcaggacccctgattagggaagatgtacacaaggtggac
atcgtgacgttttgccagcagaaagcagcgcagagtcgcaaatctgagacaccagggagc
agagactcggctctactgtggcaactgttggttctcctttgtcggcagaacgggtccgtg
gtggggtctgacatcgcggagctgctggtgcaggactgcaagaagctggagaagtacaag
cggcagccgcctgtggccaacctcatcaacctgacggatgaggactggccagtactgagc
ttagggacccggaacctgctcactggggaggttccccccagcgtggagacgcctgcgcag
atcgtggagaaattcactaagttgctctactacggaaggaaaaaggaagccttggagtgg
gccatgaagaaccatttgtggggtcatgctttgttccttgccagcaagatggacccaagg
acctacagctgggtcatgagtggcttcaccagcacgctggcgctcaacgacccactgcag
accctcttccagctcatgtccggaaggatcccacaggcagccacgtgttgtggggacgag
cagtggggagactggagaccgcacttggctgtgattctgtcgaatcaaggtggggacccg
gagctgtatcagcgcacgattgtcaccatgggggacaccctggctgggaaggggctggtg
gaagcagctcacttctgctacctcatggctcacgtgcccttcggctcctataccgtgaag
acagaccacctggccttgctgggcagtagccacaggtatgcgatcttctgggggaaaggg
agtgggaaggacatcttccaggtgattggtttagcccttgctgggctacatggctccatt
ttccatagtcttgtgtga
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