Phocoena phocoena (harbor porpoise): 136120735
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Entry
136120735 CDS
T11058
Symbol
CDH12
Name
(RefSeq) cadherin-12 isoform X1
KO
K06804
cadherin 12, type 2, N-cadherin 2
Organism
pphc Phocoena phocoena (harbor porpoise)
Pathway
pphc04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
136120735 (CDH12)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pphc04515
]
136120735 (CDH12)
Cell adhesion molecules [BR:
pphc04515
]
Cadherins
Major cadherins
136120735 (CDH12)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_FAT4_N
Ig_CLSTN
Ig_Cad99C_N
Cadherin_CELSR2_9th
Cadherin_2
Stevor
Fibulin_C
DUF443
Motif
Other DBs
NCBI-GeneID:
136120735
NCBI-ProteinID:
XP_065730400
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All DBs
Position
3:complement(18217365..18491537)
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AA seq
794 aa
AA seq
DB search
MLTRNCLSLLLWVLFDGGLLTPLQPQPQQTLATEPRENVIHLPGRRSHFQRVKRGWVWNQ
FFVLEEYMGSEPQYVGKLHSDLDKGEGTVKYTLSGDGAGTVFTIDETTGDIHAIRSLDRE
EKPFYTLRAQAVDIETRKPLEPESEFIIKVQDINDNEPKFLDGPYIASVPEMSPVGAYVL
QVKATDADDPTYGNSARVVYSILQGQPYFSIDPKTGVIRTALPNMDREVKEQYQVLIQAK
DMGGQLGGLAGTTIVNITLTDVNDNPPRFPKSIFHLKVPESSPIGSAIGRIRAVDPDFGQ
NAEIEYSIVPGDGGNLFDIVTDENTQEGVLKLKKPLDFETKKAYTFKVEASNLHLDHRFH
SAGPFKDTATVKISVLDVGEPPVFSKPLYTMEVYEDTPVGTIIGAVTAQDLDVGSSAVRY
FIDWKSDGDSYFTIDATEGTISTSELLDRESTAQYNFSIIASKVSNPLLTSRVNILINVL
DVNEFPPEISVPYETAVCENAKPGQIIQVVSAADRDLSPAGQQFSFKLSPEAAIKPNFTV
RDFRNNTAGIETRRNGYSRRQQELYFLPVVIEDSSYPVQSSTNTMTIRVCRCDSDGTILS
CNVEAIFLPVGLSTGALIAILLCIVILLAIVVLYVALRRQKKKDTLMTSKEDIRDNVIHY
DDEGGGEEDTQAFDIGALRNPKVIEDNKIRRDIKPDSLCLPRQRPPVEDNADIRDFINQR
LQENDMDPTAPPYDSLATYAYEGNGSVADSLSSIESLNMEADQDYTYLTDWGPHFKVLAD
MFGEEESYKTDKVT
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atgcttacaaggaactgtttatccctgctgctctgggtcctgtttgatggaggtctccta
acaccacttcaacctcagccacagcagactttagccacagaaccaagagagaatgttatc
cacctgccagggcggcgatcacatttccaacgagttaaacgtggctgggtatggaatcaa
ttttttgtgctggaggaatacatgggctccgagcctcagtatgtgggaaagctccattct
gacttagataagggagagggcactgttaaatacaccctctcaggagatggcgctggcacc
gtttttaccattgatgaaactacaggggacattcatgcaataaggagcctggatagagaa
gaaaaacctttctacacacttcgtgctcaggctgtggacatagaaaccaggaagccccta
gagcctgaatcagaattcatcatcaaagtgcaggatattaatgataatgagccgaagttt
ttggatggaccttatattgctagtgtcccagaaatgtctcctgtgggtgcttatgtgctc
caggtcaaggccacggatgcagatgacccaacctatggaaacagtgccagagtcgtttac
agcattcttcagggacagccttatttctctattgatcccaagacaggtgttattagaaca
gctttgccaaacatggacagggaagtcaaagaacaataccaagtcctcatccaagccaag
gatatgggcggacaactgggagggttagctggaacgacaatagtcaacatcaccctaaca
gatgtcaatgacaatccacctcgattcccaaaaagcattttccatctgaaagttcctgag
tcttcccctattggctcagctattggaagaataagagctgtggaccctgattttggacaa
aatgcggaaattgaatacagtattgttccaggagatgggggaaatttgtttgacatcgtc
acagatgagaatacacaagaaggagtcctcaaactgaaaaagccgttggattttgaaaca
aagaaggcttatacttttaaagtagaggcctccaacctgcaccttgaccaccggtttcac
tctgcgggcccttttaaggacactgccacagtgaagatcagcgtgctggatgtgggcgag
ccgccggttttcagcaagcccctctacaccatggaggtttacgaagacactccagttggg
accatcattggcgccgtcactgcccaagacctcgatgtcggcagcagtgccgtaaggtac
ttcatagattggaagagtgatggggacagctactttacaatagatgcaactgaaggaacc
atctctactagtgaattactagacagagaaagcaccgcgcagtataatttctccataatt
gcgagtaaagttagtaacccattactaaccagcagagtcaacatattaattaatgtccta
gatgtcaatgaatttcctccagaaatatctgtgccatatgagacagctgtgtgtgaaaat
gccaaaccaggacagataattcaggtagtcagcgctgcagaccgagatctttcacctgct
gggcagcaattctcctttaaattatcacctgaagctgccatcaaaccaaattttacagtt
cgtgacttcagaaacaacacagctggcattgaaacccgaagaaatggatacagccgcagg
cagcaagagttgtatttcctcccggttgtaatagaagacagcagttatcctgtccagagc
agcacaaacacaatgactattcgagtttgtagatgtgactctgatggtaccatcctgtct
tgtaacgtggaagcaatttttcttcctgtaggacttagcaccggggctttgattgcaatc
ctactgtgcattgttatactcttagccatagttgtgctgtatgtagctctgcgaaggcag
aagaagaaagacaccctgatgacctctaaagaagacatcagagacaatgttatccattat
gatgatgaaggaggtggggaggaagacacccaggctttcgacattggtgctctgagaaac
ccaaaggtgattgaagataacaaaattcgcagggatataaaaccagactctctctgtttg
cctcgtcagagaccaccagtggaagataacgcagacataagggatttcattaatcaaagg
ctacaggaaaatgatatggaccccaccgccccaccatacgactcactggcaacatatgcc
tatgaaggcaatggatcagtagccgactctcttagctccatagaatctctgaacatggaa
gcagaccaggactacacctatctaacagactggggaccgcactttaaagtcttggcagac
atgtttggtgaagaagagagttataaaactgataaagtcacttag
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