Phocoena phocoena (harbor porpoise): 136120762
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Entry
136120762 CDS
T11058
Symbol
HDGFL2
Name
(RefSeq) hepatoma-derived growth factor-related protein 2
KO
K25065
hepatoma-derived growth factor-related protein 2
Organism
pphc Phocoena phocoena (harbor porpoise)
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pphc03400
]
136120762 (HDGFL2)
DNA repair and recombination proteins [BR:
pphc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
136120762 (HDGFL2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LEDGF
PWWP
Med26
MUM1-like_PWWP
Motif
Other DBs
NCBI-GeneID:
136120762
NCBI-ProteinID:
XP_065730435
LinkDB
All DBs
Position
3:complement(170017865..170035953)
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AA seq
663 aa
AA seq
DB search
MPHAFKPGDLVFAKMKGYPHWPARIDDIADGAVKPPPNKYPIFFFGTHETAFLGPKDLFP
YDKCKDKYGKPNKRKGFNEGLWEIQNNPHASYSAPLPVSSSDSEAPEADPAVGSEDDEDR
GVMAVTAVTAAAASDRMESDSDSDKSSDNSGLKRKAVALKMSVSKRARKASSDLDQASMS
PSEEENSESSSESEKTSDQDFTPEKKAVVRAPRRGPLPGRKKKKAPSASDSDSKAESDGA
KAEPAAVARSASSSSCSSSSDSDASVKKPPRGRKPAEKPPPKPRGRKPKAERPPTTSSSD
SDSDEVDRISEWKRRDEERRRELEARRRREQEEELRRLREREKEEKERRRGRERGEAARA
GSAGSSGDELKDDDEPVKKRGRKGRGRGPQSSSDSEPEAELDREVKKSAKKLHLQSTEPA
RRPSQKEKRGRPEEKPRARPAKMERTRKRSEGFPPDRKVEKKKEPSVEEKLQKLHSEIKF
ALKVDNPDVKRCLNALEELGTLQVTSQILQKNTDVVATLKKIRRYKANKDVMEKAAEVYA
RLKSRVLGPKIEAIQKATRTGPEKAEEILAGEEAPAERAEDEASTDLSAPVNGEATSQKG
ESMEDKEPEEGQNSEEGPGGGSSEDPSHNDSAREGPDLDGPGKERQERERLRVDSESLDD
EDS
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atgccgcacgccttcaagcccggggacttggtgttcgccaagatgaagggctacccgcac
tggccggcccggatcgatgacatcgccgacggtgccgtgaagcccccgcccaacaagtac
cccatcttcttctttggtacccacgaaacagccttcctgggaccgaaggacctgtttccc
tacgacaaatgtaaagataagtacgggaaacccaacaagaggaaaggcttcaatgagggc
ctgtgggagatccagaacaacccccatgccagctacagtgctcctctgccggtgagctcc
tccgacagtgaggcccctgaagccgatccggcagttggcagtgaggacgacgaggaccgg
ggggtcatggcggtcacagccgtgaccgctgcagccgccagcgacagaatggagagtgac
tcggactcggacaagagcagtgacaacagcggcctcaagcggaaggcagtggccttgaag
atgtcggtctcaaaacgagctcgaaaggcctccagtgacctggatcaagccagcatgtct
ccatccgaggaggagaactcggaaagctcctccgagtcagagaagaccagtgaccaggac
ttcacccccgagaagaaagccgtggtccgggccccacggcggggtccccttccaggacgg
aagaaaaagaaggcgccgtcagcctccgactcggactccaaagcagaatcagacggggcc
aaggctgagcctgcggccgtggcgaggtcggcgtcctcctcctcctgctcgtcctcctcc
gactcggacgcgtccgtaaagaagcctcctcggggcaggaagccagccgagaagcctccc
cccaagccccgtgggcggaaacctaaggctgagcggccaccgaccacctcgagcagcgac
agcgacagcgacgaggtggaccgcatcagcgagtggaagcgccgggacgaggagcggcgg
cgcgagctggaggcgcggcggcgcagagagcaggaggaggagctgcggcggctgcgtgag
cgcgagaaggaggagaaggagcggcggcgcgggcgggagcgcggggaggcggcgcgtgcg
ggcagcgccggcagcagcggcgacgagctcaaggacgatgacgagcccgtcaagaagcgc
ggccggaagggccggggccggggcccccagtcctcctccgactcggagcccgaggccgag
ctggacagagaggtgaagaaatcagcgaagaagttgcacctgcaaagcacagagcccgcg
cggagacccagccagaaggagaagagagggcgccccgaggagaagccccgggccaggccc
gcgaaaatggaacggacccggaagcggtcggaagggttcccaccagaccggaaggttgag
aagaagaaagaaccttccgtggaggagaagcttcagaagctgcacagcgagatcaagttc
gccctgaaggttgacaatccggatgtgaagaggtgtctgaacgcgttagaggaactaggg
accctgcaggtgacctcacagatcctccagaagaacacggacgtggtggccacgttgaag
aagatccgccgctacaaggccaacaaggacgtgatggagaaagctgcggaggtctacgcc
cggctcaagtctcgggtcctgggaccaaagatcgaggctatccagaaggcgaccagaact
gggccggagaaggccgaggagatactggccggagaggaggcccctgcggagagggcggag
gacgaggcgagcactgatctctcggcccctgtgaacggcgaggcgacgtcccagaagggg
gagagcatggaggacaaggagccggaggaaggacagaactcagaagaggggccagggggc
ggctcctctgaagatccatcacacaacgacagcgcgcgggagggccccgacctggacggg
cccgggaaggagcggcaggagcgagagaggctgcgggtggactcggagtccctggacgac
gaggacagctga
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