Phocoena phocoena (harbor porpoise): 136120786
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Entry
136120786 CDS
T11058
Symbol
SRSF4
Name
(RefSeq) serine/arginine-rich splicing factor 4 isoform X1
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
pphc Phocoena phocoena (harbor porpoise)
Pathway
pphc03040
Spliceosome
pphc05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
136120786 (SRSF4)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
136120786 (SRSF4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pphc03041
]
136120786 (SRSF4)
Spliceosome [BR:
pphc03041
]
Common components
Common spliceosomal components
SR proteins
136120786 (SRSF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
136120786
NCBI-ProteinID:
XP_065730483
LinkDB
All DBs
Position
1:complement(22783730..22809371)
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AA seq
485 aa
AA seq
DB search
MPRVYIGRLSYQARERDVERFFKGYGKILEVDLKNGYGFVEFDDLRDADDAVYELNGKDL
CGERVIVEHARGPRRDGSYGSGRSGYGYRRSGRDKYGPPTRTEYRLIVENLSSRCSWQDL
KDYMRQAGEVTYADAHKGRKNEGVIEFVSYSDMKRALEKLDGTEVNGRKIRLVEDKPGSR
RRRSYSRSRSHSRSRSRSRHSRKSRSRSGSSKSSHSKSRSRSRSGSRSRSKSRSRSQSRS
RSKKDKSRSPSKDQSRSRSRSADKRRSKSKDQAEEKVQNSDSTGKSKSRSPSRQKSKSKS
RSRSQERGAPEKRGSVSRGRSQEKSLRKSRSRSPGGSRSRSRSKSKDKRKGRKRSRGESR
SRSRSRSRRKRGGKRDSKPGGSKKKKKEDADRSPSRSRSRSGSKEREHAKSESGQREGRG
ESEDAGTNQETRSRSRSNSKSKPNLPSESRSRSKSASKTRSRSKSRSRSASRSRSRSRSR
SHSRS
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgccacgggtgtacatcggccgcctgagctaccaggcccgggagcgcgatgtggagcgc
ttctttaagggctacgggaagatcctggaagtggatctgaagaacggatatgggtttgtg
gagtttgatgatctgcgagacgcagatgatgctgtttatgaactgaatggcaaagacctt
tgtggtgagcgagtaattgttgagcatgcccgcggcccgcgacgagatggcagttacggt
tctggacgcagtggatatggttatagaagaagtggccgagataaatatggccctcctacc
cgcacagaatacagacttattgtggagaatttgtcaagtcggtgcagctggcaagaccta
aaggattatatgcgtcaggcgggagaagtgacctatgcagatgctcacaagggacgcaaa
aatgaaggggtgattgaatttgtgtcttactctgatatgaaaagagctttggaaaagtta
gatggaactgaagtcaatggcagaaaaatcagattagttgaagacaagcctggttctaga
cgacgccggtcctactccaggagccggagtcactcaagatctcgctctcgaagcagacat
tctcgtaagagcagaagccgaagtggcagcagcaaaagcagtcattctaagagtagatcc
cgatccaggtcaggctcccgttcccggagcaagagccgcagccgcagccagagccgcagc
cgcagcaagaaggacaagagccggagccccagcaaggaccagagccggagccgcagccgc
agcgccgacaagcgccgcagcaagagcaaggaccaggccgaggagaaggtccagaacagc
gacagcaccggcaagtccaagagccgcagccccagcaggcagaaaagcaagagcaaaagc
agaagccgcagtcaggagaggggcgcgccggagaagcggggcagcgtgagcaggggccgg
agccaggagaagagcctgcgtaagagccgcagccgcagcccaggaggcagccgcagccgc
agccgcagcaaaagcaaggacaagaggaaggggaggaagaggagcaggggggagagccgc
agccgcagccgcagccgcagccgcaggaagcgaggcggcaagcgagacagcaagccgggc
ggcagcaagaagaagaagaaggaagacgccgaccgctccccgtccagatcgcggtcccgc
tcgggctcgaaggagcgggaacacgccaagtccgagtctggccagagggaaggccgaggg
gagagtgaggatgctggcaccaatcaggagacccggtccaggtcgcggtccaattccaaa
tcaaaaccaaacctcccatcagaatcacgctccagatcaaagtccgcgtcaaaaacccga
tcccggtccaagtctagatccaggtctgcgtccagatcgcgctcccggtctagatccagg
tcccactcaaggtcctaa
DBGET
integrated database retrieval system
