Phocoena phocoena (harbor porpoise): 136120805
Help
Entry
136120805 CDS
T11058
Symbol
DMXL1
Name
(RefSeq) dmX-like protein 1 isoform X1
KO
K24155
rabconnectin-3a
Organism
pphc Phocoena phocoena (harbor porpoise)
Pathway
pphc04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
136120805 (DMXL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pphc04131
]
136120805 (DMXL1)
Membrane trafficking [BR:
pphc04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
136120805 (DMXL1)
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
136120805 (DMXL1)
RAVE complex
136120805 (DMXL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rav1p_C
Beta-prop_THOC3
Beta-prop_WDR5
WD40
WD40_Prp19
Beta-prop_WDR3_1st
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR3_2nd
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
EIF3I
WD40_Gbeta
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_VPS8
Beta-prop_EML
Beta-prop_RIG_2nd
Beta-prop_DCAF4
Beta-prop_HPS5
WD40_MABP1-WDR62_1st
Beta-prop_WDR19_2nd
MIOS_WD40
Beta-prop_Vps41
Motif
Other DBs
NCBI-GeneID:
136120805
NCBI-ProteinID:
XP_065730505
LinkDB
All DBs
Position
3:98654490..98782998
Genome browser
AA seq
3047 aa
AA seq
DB search
MNLHQVLTGAVNPGDHCFSVGSVGDQRFTAYASGCDVVILGSDFERLQIIPGAKHGNIQV
GCVDCSMQQGKIAASYGNVVSVFEPVNLPKQKKNLELYSQWQKSGQFFLDSIAHNITWDP
AGNRLLTGSSCLQLWSSANLEKSAEDENPDKTDLNFGDWRCIWHCKTASQVHLMKFSPDG
EFFATAGKDDCLLKVWYNVENWRTSVTSPDKSSEKQSQGEIDFSFVYLAHPRAVNGFSWR
KTSKYMPRASVCNVLLTCCKDNICRLWVETFLPNDCLLYGGDCSHWTEPINLTNNFKRNA
SSKERVQNALDVNLKHFRRGRRRSLALVAHTGYLPHQQDPHHVHRNTPLHANALCHFHIA
ASINPATDIPLLPSITSLSLSENEEKSGPFVVHWLNNKELHFSLSMEVFLQQLRKSFEQP
SSEMSVEDSNQADVKSDEEIDDGIDDLKINLEKKELGSDKLVPNSSSVPLPSAAIDHQIE
VLLSEWSKNADMLFSIHPMDGSLLVWHVDWLDEYQPGMFRQVQVSFVSRIPVAFPTGDAN
SLCKSIVMYACTKNVDLAIQQGKQKTSSLTRSTSMLISSGHSKSTNSLKLSIFTPNVMMI
SKHADGSLNQWLVSFAEESAFSTVLSISHKSRYCGHRFHLNDLACHSVLPLLLTTSHHNA
LRTPDVDNQKEPYGAVNIEECSLAQQNKSTIDMAFQDPNAVYSELILWRVDPVGPLSFSG
GVSELARINSLHVSAFSNVAWLPTLIPSYCLGAYCNSPSACFVASDGQYLRLYEAVIDAK
KLLYELSNPDISKYVGEVFNIVSQQSTARPGCIIALDPITKLQGRKTQLLHVFQEDFILN
NLEKKRLGKDRILSDAGSSPSEFSEKFYLIVIECTQDNRSLLHMWNLHLKSIPVSLDEKV
DTKISEAVWQPEEHYSSSPEKILSPFSQKYQACRANLQSTSKLTLSSEMVYSQELHLPEG
VEIISVKPSAGHLSSSSIYPICSAPYLLATSCSDEKVRFWRCRVTAEESATSKNGEMDLI
YIWEEWPLLIEDGLQSNSSITVPGRPIEVSCAHTNRLAVAYKQPTSNSRCSQDFVMHVSI
FECESTGGSCWVLEQTVHLDELNTVLDSGISIDSNLVAYNKQEVYLSSKESVTSNTKRLV
HLDWMSREDGSHILTVGIGSKLFMYGPLAGKVQEQTGKESLAFPLWEGTKVVPLSKFVLL
RSMDLVSSVEGSPPFPVSLSWVRDGILVVGMDCEMHVYSQWQPSSKQEPVTTDSYNGSTP
SIISLIKQSNSSSSGLHPPKKTLTRSMTSLAQKICGKKTALDPSVGMEDSGLFEAAHVLS
PTLPQYHPLQLLELMDLGKVRRAKAILSHLVKCIAGEVVALNEAESNHERRFRSLTISAS
GSTTRDPQAFNKSENTDYTEIDSVPPLPLYALLAADDDSYYSSLEKSSNQSTLNNSNQLS
KESYDELFQMSALMTDSHVLKTDEENTKPRVIDLSQYSPTYFGPEHAQVLSGHLLHSSLP
GLSRMEQMSLMALADTIATTSTDIGESRDRSQGGETLDECGLKFLLAVRLHTFLTTSLPA
YRAQLLHQGLSSSHFAWAFHSVAEEELLNMLPAMQKDDPTWSELRAMGVGWWVRNTRILR
KCIEKVAKAAFYKKNDPLDAAIFYLAMKKKAVIWGLYRSQKDSKMTQFFGHNFEDERWRK
AALKNAFSLLGKQRFEHSAAFFLLAGCLRDAIEVCLEKLNDIQLALVIARLYESEFDTSA
TYKSILRKKVLGIDSPVNELNLLNINMHYDPFLRSMAYWILEDYSSALETLIKQPIREDD
DQVMMSACNPAVFNFYNYLRTHPLLLRRHFGSSDAFSTHMSLTGKSGLAGTINLSERRLF
FTTASAHLKAGCPMLALEVLSKMPKVIKKTKPFCRTSSFLDTSKVCSPSSPFKLDAREDK
SSAIDWSQSLMNGFGSSSEGSSEKQSNSTLSFDWSQPSIVFQDDSLELKWDSDNDEENED
LPVSMKELKPLQRKVGKKIDDETSSKYTDSLSTLDEHDILNPSEDIIAVQLKFRACLKIL
TVELRTLSTGYEIDGGKLRYQLYHWLEKEVIALQRTCDYCSDPEELQSAFGENGDAFGLN
EDAEDLLHQTKVKQLRENFQEKRQWLLKYQSLLRMFLSYCILHGSHGGGLASVRMELILL
LQESQQETAEPIFPSPLSEQTSVPLLFACTASAKTVVANPLLHLSNLTHDILHAIINFDS
PPHPDIQSNKVYVMHTLAASLSACIYQCLCGSHNYSSFQTNQFTGMVYQTVLLPHRHSLK
TGSLDEAITPNTSPAQWPGITSLIRLLNSSGEEAQSGLTVLLCEILTAVYLSLFIHGLAT
HSSNELFRIVAHPLNEKMWSAVFGGGAHVPSKEQTRSKALPVSSLVEEGEKQNKRFRPSK
MSYRESASVTSSSPPVSQESLIVKEKFIPPELSIWDYFIAKPFLPASQSRAEYDSEESLE
SDDEDEDVLASDFHLQEHSNSNSYSWSLMRLAMVQLVLSNLKTFYPFAGHDLAELPVSSP
LCHAVLKTLQCWEQVLLRRLEIHGGPPQNYIASHTSEESVSAGPAILRHKALLEPTNTPF
KSKHHLSLSVKRLWQYLVKQEEIQETFIRNIFTKKRCLNESLEDSCETIKNSMMEEPNIN
KVEADSGYPGGKARIIHKESDIITAFAVNKANRNCIAIASSHDVQELDVSGILATQIYTW
VDDDIEMETKGSEDFLVIHARDDLTAVQGTTPYTHSNPGTPINMPWLGSTQTGRGASVMI
KKAINNVRRMTSHPSLPYYLTGAQDGSVRMFEWGHSQQITCFRSGGNSRVTRMRFNYQGN
KFGIVDADGYLSLYQTNWKCCPVTGSMPKPYLTWQCHNKTANDFVFVSSSSLIATAGLST
DNRNICLWDTLVAPANSLVHAFTCHDSGATVLAYAPKHQLLISGGRKGYTCVFDLRQRQQ
RQLFQSHDSPVKAIAIDPTEEYFVTGSAEGNIKIWSLSTFSLLHTFINEHARQSIFRNIG
TGVMQIETGPANHIFSCGADGTMKMRILPDQFSPLNEVLKNDVKFML
NT seq
9144 nt
NT seq
+upstream
nt +downstream
nt
atgaacctgcaccaggtgctgaccggagctgtgaaccccggcgaccactgcttctccgtg
ggcagcgtcggcgaccagcgcttcacggcttatgcctctggatgtgacgttgttatactg
ggaagtgattttgaaagactgcaaataatcccaggagctaaacatggaaatattcaagta
ggatgtgtagattgttcaatgcaacaaggcaagattgcagcatcctatggaaatgttgta
tctgtttttgaaccagttaacctaccgaagcaaaagaaaaatttggaattatatagtcag
tggcagaaaagtggccaattttttctggactcaatagcacacaatataacttgggatcct
gcaggcaatcgtcttttaactggttctagctgtttgcaactgtggtccagtgctaacttg
gagaaatcagctgaagatgaaaatccagataaaacagatcttaactttggggattggaga
tgcatttggcattgcaaaactgcttcccaagttcatttaatgaagttttcaccagatggt
gaattttttgccactgctgggaaggatgactgtcttttaaaggtatggtataatgtagaa
aactggcggacatctgttacctctccagataaaagttcagaaaaacaatcccaaggagaa
attgacttttcttttgtatatctggcccatcctcgagctgtaaatggattttcctggcgt
aaaacaagcaaatatatgcctagggcttctgtatgtaatgtactgttgacttgctgcaaa
gataacatatgtcgtctttgggtagagacatttttaccaaatgattgtttgctctatgga
ggtgactgcagccattggactgaaccaattaatttaacaaataacttcaagagaaatgct
tccagtaaagaacgagttcaaaatgctttagatgtaaatctgaaacattttcgtagaggt
cggaggagatcacttgcacttgtagcacatactggatacctgccacatcagcaagatcct
catcacgttcacaggaacactccactgcatgccaatgcactttgccactttcatattgca
gccagcatcaacccagccacggacattccacttcttccttctattacgtctctgagtcta
agtgaaaatgaagagaagagtggaccttttgtggtacactggctaaacaataaagaattg
catttttctttgtccatggaagtctttttacaacaacttagaaaaagttttgagcaacca
tcttctgagatgagtgtagaagactctaatcaggcagatgtaaaatctgatgaagagatc
gatgatggtattgatgatctgaaaataaatcttgaaaagaaggaattgggcagtgataaa
ttggtaccaaattcaagttctgtaccattaccatcagctgccattgatcatcagattgaa
gtacttctgtctgaatggagtaaaaatgcagacatgctattcagtattcatcccatggat
ggttctttgctggtttggcatgtggattggctggatgaataccagcctggtatgtttcgt
caagtacaggtgtcctttgtttccagaattcctgtagctttccccacaggtgatgcaaac
tctctctgtaaaagcatagtgatgtatgcctgtaccaagaatgttgacttggctattcag
caagggaaacaaaaaacttccagcctgacacgttccacatcaatgcttatatcttctggt
cacagtaaatcaactaatagtttaaaattaagcatttttacccctaatgttatgatgatt
tcaaagcatgctgatggctccctgaatcaatggcttgtcagttttgccgaggaatctgcc
ttttctacagttctcagtatttcccacaaatccagatattgtggtcatcgctttcatctt
aatgatttagcttgtcactcagtattaccattattgctgacaacgtcacaccataacgca
ttaaggacaccagatgttgataaccaaaaggaaccttatggtgctgtgaatattgaagaa
tgttctttggcacaacagaataaaagcactattgacatggcctttcaggatcccaatgca
gtttacagtgagcttattctttggagagttgatccagttgggccattgtctttttctgga
ggtgtttctgagcttgcccggattaattctcttcatgtttctgcattttccaatgtggca
tggctgcccactcttatacccagttattgtctaggtgcatactgcaactctcctagtgca
tgctttgtagcaagtgatggacaatatctgagattatatgaagcagttattgatgccaag
aaacttctatatgagctttccaatcctgacatttctaaatatgttggtgaagtgtttaac
atcgtaagtcaacagtcaacagccaggccaggatgcattattgcattagatcccattacc
aaacttcaaggcagaaaaacccagctgcttcatgtttttcaagaagacttcattttgaat
aaccttgagaagaaaagactaggaaaagacagaatattatctgatgcaggcagctcacct
agtgaattttcggaaaaattctacctaattgtaatagagtgcacccaagacaaccgttca
ttgttacacatgtggaatttgcatttgaagtccattcccgtctcattggatgaaaaagta
gatacaaaaatatctgaagcagtttggcagccagaagaacattattcttcttctccagag
aagatcttatcccctttttcacagaagtatcaggcttgcagagcaaatctccagagtacc
agcaagttgactctgtcttcagaaatggtttatagccaagagttgcatttgccagaagga
gttgagataataagtgttaagccatcagcaggacatctgagttcttcttccatatatccc
atatgcagtgctccttatttattggcaacttcatgctcagatgagaaagtaagattctgg
agatgtagagtaacagctgaagaatctgccacttcaaagaatggagaaatggatcttata
tacatttgggaagaatggccgttacttattgaagatggactgcagagcaatagtagtata
actgtacctggtaggcctatagaagtcagctgtgcacacacaaatcgtttagcagtagca
tataagcagcctacgtctaatagtagatgttctcaggactttgtgatgcatgtaagtatt
tttgaatgtgagtctacaggaggttcatgctgggtccttgaacagacagttcatttagat
gagttaaatacagtgttggattctggcattagtattgatagcaatttagtggcctataat
aaacaagaggtatatttatccagtaaagagagtgtcacatcaaacacaaagcgtttagtt
cacttagattggatgtctagagaagatggttctcatattcttactgtaggaattggatca
aaactttttatgtatggacccctggctggcaaggtacaagaacagacgggtaaggaaagc
ctggcatttcctctctgggaaggtactaaagttgtgcctctttctaaatttgtactgtta
cgaagtatggacttggtttcttctgtagaaggctctccaccttttcctgtttctttatca
tgggtccgggatggcatcctggtggtaggaatggattgtgaaatgcatgtatattcccaa
tggcagccatcttctaaacaagaacctgttacaacagattcatacaatgggagcactcca
tctataataagtttaataaaacagagtaactcatcaagttctggattacatcctccaaag
aaaaccctgactcgatccatgaccagtcttgcacagaaaatctgtggaaagaaaactgca
cttgatccttctgtgggtatggaagattcaggtctttttgaagcagctcatgttctttcc
ccaactttacctcagtaccatcctttgcagcttttggaactcatggatcttggcaaagtt
cggagagcaaaggccatcttgtcacatcttgtcaagtgcattgctggggaagttgtggct
ctgaatgaagctgaatctaatcatgagcgccgctttaggtctctcaccatcagtgctagt
ggaagtactactcgagacccccaggcattcaacaagagtgaaaatacagattacacagaa
atcgattctgtccctccacttcctttatatgccttacttgcagcagatgatgatagctat
tactcatccttggagaaatctagtaatcagagtaccttaaataactcaaaccagttgtca
aaagaaagttatgatgagctttttcagatgtcagctttaatgactgatagtcatgtgtta
aagacagacgaagaaaatacaaagcccagggttattgacctttcacaatacagtccaact
tactttggtcctgagcacgctcaggttctttctggccacttacttcattctagtttacca
ggactcagccggatggagcagatgtctttgatggctttagcagatacaattgcaactacc
agcactgatattggagaaagcagagacagaagccaaggtggagaaactcttgatgaatgt
ggcttaaaatttcttttggctgttcgacttcatacttttcttacaacttctcttccagct
tatcgagctcaactccttcaccaaggcctgtctagtagtcattttgcctgggcctttcat
tcagtagcagaagaagaactgctgaacatgttgccagcaatgcagaaagatgatcccaca
tggtctgaacttagagctatgggtgtggggtggtgggtccggaatacccgcatcttacgc
aaatgcatagaaaaggtagccaaagcagccttttataaaaagaatgatcctttagatgct
gccattttttaccttgcaatgaaaaagaaagctgtgatttggggattatatagatcccaa
aaagattccaagatgacacagttttttgggcacaattttgaggatgagagatggcgtaaa
gcagctttaaagaatgctttttctttgttaggaaaacaaagatttgaacattcagcagca
ttttttcttttagctggttgcctcagagatgcaattgaggtatgtcttgagaaactgaat
gacattcagttggctcttgtaatagcaagactctatgagtctgaatttgatacatctgca
acatataaatctattttacgtaaaaaagttttgggaattgattctcctgtcaatgaactc
aatttgttgaatataaatatgcattatgatccttttcttcggagtatggcatattggatt
ttagaagattatagtagtgctctggaaacattaataaagcaacctatcagagaggatgat
gatcaagtcatgatgtcagcctgcaatcctgctgtttttaatttctacaattatctaagg
acacatcctcttttgctgagacgtcattttggatcatctgatgcgttttccacacacatg
agtttaacaggaaaaagtggactggcaggaacaattaatttaagtgaaagaagattattt
tttactactgccagtgctcatttaaaagctggctgccctatgttggctttggaagtatta
tcaaagatgccaaaagtcatcaaaaaaacgaaacctttttgtagaacatctagttttctg
gatactagtaaagtctgttctccttcttctccattcaaattggatgcaagggaagataag
tcttctgctattgattggtcacagtcactgatgaatggttttggatcttcttcagagggt
tcctcagagaagcagtcaaattccactctttcttttgactggagccaaccaagtattgta
tttcaggatgactctttagaattaaaatgggacagtgataacgatgaagaaaatgaggat
ctccctgtttcaatgaaagaactaaaacctttacagagaaaagtagggaaaaaaatagat
gatgaaacaagttctaagtacacagactctctcagcacactagatgaacatgacatttta
aatccatcagaagatatcattgcagttcagttaaaatttagagcatgtttaaagattctc
acggtagaacttcgtactttatctactggatatgaaatagatggtggaaaattgcgatac
cagctgtaccactggcttgaaaaagaggtgatagcccttcagagaacttgtgactattgt
tcagatcctgaagaattacagtctgcatttggtgaaaatggagatgcatttggattaaat
gaagatgctgaagatttgcttcatcaaacaaaagtgaaacaactgagagaaaattttcag
gaaaaaagacagtggcttttgaaatatcagtcactcttgaggatgtttcttagttactgc
atactgcatggatcccatggtgggggtcttgcatctgtgagaatggaattgattttgctt
ttacaagaatctcagcaggaaacagcagaaccaatatttcctagccctctttcagaacaa
acctcagtacctctcctctttgcttgtacagccagtgccaaaacagtagttgccaatccg
ttattgcaccttagtaatctaacacatgatattctgcatgccataataaactttgattca
ccaccccatcctgatatccaaagcaataaagtatatgtaatgcatactttagcagcttca
ctttctgcttgtatttatcagtgcctttgtggtagtcataactacagttcatttcaaaca
aatcagtttactggaatggtgtatcagacagtactgcttccccatcgacattctttgaaa
acaggaagcttagatgaagccataactcccaatacatcaccagctcagtggccaggaata
acttctctaatccgacttttgaattcttctggggaggaagcccagtcagggcttacagtc
ttgctctgtgagattctcacagcagtgtatcttagtctcttcatccatggcttggcaaca
cattctagtaacgaactatttcggattgtggcccaccctctaaatgaaaaaatgtggtct
gctgtatttggtggaggtgcacatgttcccagcaaagaacagacacgctcaaaagcttta
cctgtttcttcactagtggaagaaggagagaaacagaacaaacgttttaggccatcaaaa
atgtcttacagagaatctgcctcagtgacctcttcctcaccaccagtaagccaggaatca
ctgatagttaaagagaagttcattccacctgagctcagtatctgggactatttcattgcc
aagccttttctacctgcttctcaaagtagagcagaatatgattcagaggagagtctggaa
agtgatgacgaagatgaagatgttttagcttcagatttccatctccaagagcattctaat
tcaaattcatatagttggtcattgatgcgtttggcaatggtgcagttggtgctcagcaat
ttgaagactttctatccctttgcaggtcatgatcttgcagagcttccagttagttcacca
ctttgtcatgccgttctaaaaactcttcaatgttgggaacaagttcttctccgacgactt
gaaatccacggggggccacctcaaaactatattgcaagtcatacctctgaagagagtgtg
tctgcaggtcctgcaattctccgccacaaagctttgctggaacctacaaacactcctttc
aaatctaaacaccatctgtcactgtctgtgaagagactttggcagtacttggtgaagcag
gaagaaattcaagaaacctttatcagaaatatattcacaaagaaaaggtgtctaaatgag
tcattagaggacagctgtgaaaccatcaaaaattctatgatggaggagccaaacatcaat
aaggtagaagcagattcgggatatcctggaggtaaagcaagaattattcataaggaatct
gatataattactgcctttgctgttaataaagcgaatagaaactgcatagcaattgcttca
agccatgatgttcaagaactagatgtttctggaattctggctacacagatctatacttgg
gtagatgatgatatagaaatggaaaccaaagggtcagaagatttcttggttatacatgct
cgtgatgatttaacagctgtgcagggtacaaccccatacacacatagcaatcctggtact
ccaattaacatgccatggcttggtagtacacagactggcagaggagcatcagtgatgatt
aagaaagccattaataatgtcagaagaatgacttctcatccatctcttccttactatctg
acaggagctcaagatggaagtgtgagaatgttcgaatggggccattctcaacaaataacc
tgtttccgatctggtggcaattcaagagttacaagaatgagatttaactatcaaggaaat
aagtttggaatagttgatgctgatggatatttaagtttgtatcaaacaaactggaaatgt
tgtccagttactggaagtatgcctaagccatacctgacttggcagtgtcataacaaaaca
gccaatgattttgtcttcgttagttcctcctctctgatagctacagctggtctttcaact
gacaatagaaacatatgtttgtgggacactcttgtagcacctgccaacagtttagtccat
gcttttacttgtcatgatagtggagccactgttttagcatatgctccaaaacatcagcta
ctaatatcaggtggcagaaaaggctatacatgtgtttttgaccttcggcaacgacagcag
aggcagcttttccagagccatgattctcctgttaaagccattgctattgatccaactgaa
gagtactttgttacaggatctgctgagggcaacataaagatttggagtctctctaccttt
agtcttctccacacttttatcaatgaacatgctcggcaatccattttcagaaatattgga
actggagtgatgcaaattgagacagggcctgcaaatcacattttttcatgtggagctgat
ggaacaatgaaaatgagaatactgccagatcagtttagcccattaaatgaagtgttgaaa
aatgatgtgaaattcatgctgtaa
DBGET
integrated database retrieval system
