Phocoena phocoena (harbor porpoise): 136120828
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Entry
136120828 CDS
T11058
Symbol
SIN3B
Name
(RefSeq) paired amphipathic helix protein Sin3b
KO
K23213
paired amphipathic helix protein Sin3b
Organism
pphc Phocoena phocoena (harbor porpoise)
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pphc03036
]
136120828 (SIN3B)
Chromosome and associated proteins [BR:
pphc03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
136120828 (SIN3B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sin3a_C
PAH
Sin3_corepress
PAH_ZNF598
Motif
Other DBs
NCBI-GeneID:
136120828
NCBI-ProteinID:
XP_065730539
LinkDB
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Position
3:160642463..160678260
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AA seq
1123 aa
AA seq
DB search
MAHAGGGGGGGGGPAGRGLSGARWGRSGSAGHEKLPVHVEDALTYLDQVKIRFGSDPATY
NGFLEIMKEFKSQSIDTPGVIRRVSQLFHEHPDLIVGFNAFLPLGYRIDIPKNGKLNIQS
PLSSQENSHNHSDCTENVKQQMLYKEDKPQVPLESDSVEFNNAISYVNKIKTRFLDHPEI
YRSFLEILHTYQKEQLSTKGRPFRGMSEEEVFTEVANLFRGQEDLLSEFGQFLPEAKRSL
FTGNGPCEMNSVQKSEHEKNLEHSKKRSRPSLLRPVSAPAKKKMKLRGTKDLSIATVGKY
GTLQEFSFFDKVRRVLKSQEVYENFLRCIALFNQELVSGSELLQLVSPFLGKFPELFAQF
KSFLGVKELSFAPPMSDRSGDGISREIDYASCKRIGSSYRALPKTYQQPKCSGRTAICKE
VLNDTWVSFPSWSEDSTFVSSKKTPYEEQLHRCEDERFELDVVLETNLATIRVLESVQKK
LSRMAPEDQEKFRLDDCLGGTSEVIQRRAIHRIYGDKAPEIIESLKKNPVTAVPVVLKRL
KAKEEEWREAQQGFNKIWREQYEKAYLKSLDHQAVNFKQNDTKALRSKSLLNEIESVYDE
HQEQHSEGRSAPSSEPHLIFVYEDRQILEDAAALISYYVKRQPAIQKEDQGTIHQLVHQF
VPSLFFSQQLDLGASEDSADEGRGSPQGQSADPGDRKKPAPGPQSSASEEKGASGEAPAT
EQQPPQHKPLDDVYSLFFANNNWYFFLRLHQTLCSRLLKIYRQAQKQLLEYRTEKEREKL
LCEGRREKGNDPAMELRLKQPSEVELEEYYPAFLDMVRSLLEGSIDPTQYEDTLREMFTI
HAYVGFTMDKLVQSIARQLHHLVSDDVCLKVVELYLNEKKRGAAGGNLSSRCVRAARETS
YQWKAERCMADENCFKVMFLQRKGQVIMTIELLDTEEAQTEDPLEVQHLARYVEQYVGTE
GASSSPTEGFLLKPVFLQRNLKKFRRWQCEQVRALRGEAKSSWKRLVGVESACNVDCRFK
LSTHKMMFIVNSEDYMYRRGTLGRAKQVQPLVLLRHHQHFEEWHSRWLEDNVPVEAASLV
QDWLMGEEDEDMVPCKTLCETAHVHGLPVTRYRVQYSRRPASP
NT seq
3372 nt
NT seq
+upstream
nt +downstream
nt
atggcgcacgctggcggcggcggcggcggcggcggcggccccgcgggccgggggctgagc
ggcgcccgctggggtcgctcgggctctgcgggccacgagaagctgccggtgcacgtggag
gacgccctcacatacttggaccaggtgaagatccgcttcggcagcgaccctgccacttac
aatggtttcctggagatcatgaaggagttcaaaagccagagcatcgatactcctggagtc
atccgacgagtgtcacagctcttccacgaacaccctgacctgattgttggattcaacgct
ttccttcctctcgggtacagaatagacattcccaagaacggcaagttaaacatacagtcg
cctctgtcgagccaggagaattcgcacaaccacagcgactgtacagagaacgtcaagcag
cagatgctatataaggaggacaaaccgcaggtgcccttggagtcagattccgtggaattc
aacaacgccatcagctatgtgaacaagattaagacccgctttctagatcacccagaaatc
tacaggtcattcctggagatactgcacacttaccagaaggagcagctgagcacgaagggc
cgtccgttccgaggcatgtctgaagaggaggtgttcaccgaggtggccaacctcttccgc
ggccaggaggacctgctctccgagtttggacagttcctgcccgaagccaagcggtccctg
ttcacaggaaatgggccatgcgaaatgaacagtgtccaaaagagcgagcacgagaagaat
ctggaacacagcaaaaagcgctctcggccctcactcctccgtcccgtgtctgcaccagcc
aagaagaaaatgaaactccgtggtaccaaagacctgtccatcgccaccgtggggaagtac
gggactctgcaggagttctccttctttgacaaggtgcgcagggtgctgaagagccaggag
gtctacgagaacttcctccgctgcatcgcgctcttcaaccaggagcttgtgtccggctct
gagctcctccagctggtcagcccatttctagggaaatttccagaactctttgcacagttc
aagtccttcctgggggtgaaagagctgtccttcgccccacccatgagtgacagatccggg
gatggaataagccgggaaatcgactacgcctcatgcaagcgcatcggatccagctaccgg
gcgctccccaaaacctaccagcagcccaagtgcagcgggaggacggccatctgcaaggag
gtactgaacgacacctgggtgtccttcccctcctggtcagaggactccaccttcgtcagc
tccaagaagacaccctacgaggagcagctgcaccgctgtgaggacgagcgtttcgagtta
gacgttgtcctggagaccaacctggccacgatccgggtgttggaaagcgtgcagaagaag
ctctcccggatggcgccggaagaccaggagaagttccggctggacgactgtctggggggc
acgtcggaggtgatccagcgccgcgccatccaccgcatttatggcgacaaggctccggag
atcattgagagcctcaagaagaaccctgtcaccgctgtccccgtcgtcctgaaaaggctg
aaggccaaagaggaggagtggcgggaggcccagcagggcttcaacaagatctggcgggag
cagtatgagaaggcgtacctcaagtccctggaccaccaggccgtgaacttcaagcagaat
gacaccaaggcccttcgctccaagagcttgctcaatgagattgagagtgtctatgacgag
caccaggagcagcactcggagggccgcagcgccccctccagcgagccgcacctcatcttc
gtatacgaggaccggcagatcctggaggacgcggccgccctcatcagctactacgtgaag
cggcagccggccatccagaaggaggaccagggcaccatccaccagctggtgcaccagttc
gtgcccagcctcttcttctcccagcagctggacctgggcgcgtccgaggactccgccgat
gagggccgggggagcccccaggggcagagtgcagaccctggtgaccggaagaagccagcg
cccggaccgcagagcagcgcctcggaggagaagggggcctcgggcgaggcgccggccaca
gagcagcagccgccgcagcacaagcccctggacgacgtctacagcctcttctttgccaac
aacaactggtatttcttcctgcgcctccatcagaccctgtgctccaggcttctgaagatc
taccgccaggcacagaagcagctcctggagtaccggacggagaaggaaagggagaaactg
ctctgcgagggccgccgggagaagggcaacgaccccgccatggagctgcggctgaagcag
ccaagtgaggtggagctggaggaatactacccggccttcctggacatggtgcggagcctg
ctggagggcagcatcgaccccacgcagtacgaggacaccctgcgcgagatgttcaccatc
cacgcctacgtgggcttcaccatggacaagctggtgcagagcatcgcccggcagctgcac
cacctcgtgagcgacgatgtctgtctgaaggtggtggagctctacctgaacgagaagaag
cggggtgctgccggcgggaacctgtcctcccgctgtgtccgcgccgccagggagaccagc
tatcagtggaaggccgagcggtgcatggctgacgagaactgctttaaggtgatgttcctc
cagcgcaaagggcaggtgatcatgaccattgagctcctggacaccgaggaagcccagaca
gaggacccactagaggtgcagcacctggctcggtacgtggagcagtacgtggggaccgag
ggtgcgtccagctcgcccaccgagggcttcctcctgaagcctgtgttcctgcagaggaac
ctcaagaagttccgcaggtggcagtgtgagcaggtgcgcgcgctgcggggtgaggccaag
agctcctggaagcggctggtcggggtagagagcgcctgcaacgtggactgccgcttcaaa
ctcagcacccacaagatgatgttcatcgtgaactccgaggactacatgtaccgccgtggg
acgctcggccgggccaagcaggtgcagcccctggtcctgctgcgccaccaccagcacttc
gaggagtggcacagccgctggctggaggacaacgtgccggtggaggcagccagcctggtg
caggactggctgatgggcgaggaggacgaggacatggtgccctgcaagacgctctgcgag
acggctcatgtgcacgggctgccggtgacccgctaccgagtgcagtacagccgccgcccg
gcctcgccctga
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