Phocoena phocoena (harbor porpoise): 136120883
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Entry
136120883 CDS
T11058
Symbol
RBM22
Name
(RefSeq) pre-mRNA-splicing factor RBM22
KO
K12872
pre-mRNA-splicing factor RBM22/SLT11
Organism
pphc Phocoena phocoena (harbor porpoise)
Pathway
pphc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
136120883 (RBM22)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pphc03041
]
136120883 (RBM22)
Spliceosome [BR:
pphc03041
]
Complex B
Other components
Prp19-related factors
136120883 (RBM22)
Complex C
136120883 (RBM22)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
STL11_N
zf-CCCH_RBM22
RRM_1
Torus
zf_CCCH_4
Nup35_RRM_2
RRM_occluded
zf-CCCH_2
zf-CCCH
RRM_3
zf-CCCH_4
RRM_YTH1
zf-CCCH_3
zf-CCCH_10
zf-CCCH_12
zf-CCCH_PARP12
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
136120883
NCBI-ProteinID:
XP_065730624
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All DBs
Position
3:complement(127518836..127528170)
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AA seq
420 aa
AA seq
DB search
MATSLGSNTYNRQNWEDADFPILCQTCLGENPYIRMTKEKYGKECKICARPFTVFRWCPG
VRMRFKKTEVCQTCSKLKNVCQTCLLDLEYGLPIQVRDAGLSFKDDMPKSDVNKEYYTQN
MEREISNSDGTRPVGMLGKTTSTSDMLLKLARTTPYYKRNRPHICSFWVKGECKRGEECP
YRHEKPTDPDDPLADQNIKDRYYGINDPVADKLLKRASTMPRLDPPEDKTITTLYVGGLG
DTITETDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEKSFNKLIVNGRRLNV
KWGRSQAARGKEKEKDGTTDSGIKLEPVPGLPGALPPPPAAEEEASANYFNLPPSGPPAV
VNIALPPPPGIAPPPPPGFGPHMFHPMGPPPPFMRAPGPIHYPSQDPQRMGAHAGKHSSP
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atggcgacctctctgggttccaacacctacaacaggcagaactgggaggatgcggacttc
cctattctgtgccagacgtgtcttggagaaaacccatatatccgaatgaccaaagaaaag
tacgggaaggaatgcaaaatctgtgccaggccgttcacagtgtttcgttggtgccccggg
gtccgcatgcgtttcaagaagactgaagtttgccagacttgcagtaaattgaagaatgtc
tgtcagacctgcctcttggacctagagtatggcttgcccatccaggtccgtgacgcagga
ttgtcttttaaggatgacatgccaaagtctgatgtcaacaaagaatactatacacagaat
atggagcgagaaatttctaactctgatggaacacggccagttggcatgttggggaagacc
acatccaccagtgacatgctgctcaaactggcccggaccacaccctactacaaaagaaat
cgaccccacatttgctccttctgggtgaaaggagaatgtaagagaggagaggagtgtcca
tacagacatgagaagccaacagatccggatgacccccttgctgatcagaacattaaagac
cgatattatggaatcaatgaccctgtggcagataaacttttaaagcgggcatcaacaatg
cctcgtctggacccaccagaggacaagactatcaccacactgtatgttggtggtctgggc
gataccattactgagacagatctaagaaatcacttctaccagtttggagagatccggaca
atcactgttgtgcagagacaacagtgtgcttttatccagtttgccacaagacaggctgca
gaagtggctgctgagaagtcctttaacaagttgatcgtcaatggccgcaggctcaacgtg
aaatggggaaggtcccaagcagccagaggaaaagaaaaggagaaggacggaaccacagac
tctggaatcaagctagagcccgttccagggctaccaggagctcttcctcctcctcctgcc
gcagaagaagaggcctcagccaactacttcaacctaccccccagcggtcctccagcggtg
gtgaacatcgccctgccacccccgcctggtattgccccgcccccacccccaggttttggg
ccacacatgttccacccaatgggaccaccccctcctttcatgagggctccaggaccaatc
cactatccttctcaggaccctcagaggatgggagctcatgccgggaaacacagcagcccc
tag
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