Phocoena phocoena (harbor porpoise): 136120918
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Entry
136120918 CDS
T11058
Symbol
DDX49
Name
(RefSeq) probable ATP-dependent RNA helicase DDX49
KO
K14778
ATP-dependent RNA helicase DDX49/DBP8 [EC:
5.6.2.7
]
Organism
pphc Phocoena phocoena (harbor porpoise)
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pphc03009
]
136120918 (DDX49)
Enzymes [BR:
pphc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
136120918 (DDX49)
Ribosome biogenesis [BR:
pphc03009
]
Eukaryotic type
90S particles
Helicases
136120918 (DDX49)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
P-loop_SecA
AAA_22
Motif
Other DBs
NCBI-GeneID:
136120918
NCBI-ProteinID:
XP_065730704
LinkDB
All DBs
Position
3:162287064..162294115
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AA seq
483 aa
AA seq
DB search
MAGFAELGLSSWLVEQCRQLGLKQPTPVQLGCIPAILEGRDCLGCAKTGSGKTAAFVLPI
LQKLSEDPYGIFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCIVVGGMDMVAQALELSRK
PHVVIATPGRLADHLRSSNTFSIKKIRFLVMDEADRLLEQGCTDFTVDLEAILAAVPARR
QTLLFSATLTDTLRELQGLATNQPFFWEAQAPVRTVEQLDQRYLLVPEKVKDAYLVHLIQ
NFQDEHEDWSIIIFTNTCKTCQILCMMLRKFNFPTVALHSMMKQKERFAALSKFKSSIYR
ILIATDVASRGLDIPTVQVVINHNTPGLPKIYIHRVGRTARAGRQGQAITLVTQYDIHLV
HAIEEQIKKKLEEFSVEEPEVLEILTQVNVVRRECEIKLEAANFDEKKEINKRKQMILEG
KDPDLEAKRKAELAKIKQKNRRFKEKVEQALQRQKASGAGRRGCPSRAQPEACLSPAPAQ
GPA
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atggctggctttgcggagcttgggctgtcatcctggctcgtggaacaatgtcggcagctg
ggtttgaagcagcccacgcccgtgcagctcggctgcattcccgccatcctggaaggtcgg
gactgcctgggctgtgccaagacaggcagtggcaagacagcagcgtttgtcctgcccatc
ttgcagaagctgtctgaggatccctatggcatcttctgcctcgtcctaacacccaccagg
gagctggcctaccagatcgcagagcagttccgggtcctggggaagcctctgggcttgaaa
gactgcatcgttgtcggcggcatggacatggtggcccaggccttggagctctcccggaaa
ccacatgtggtcatcgccacaccagggcgcctggctgaccacctccgcagctccaatacc
ttcagcataaagaagattcgcttcctggtgatggatgaggcggaccggctgttggagcag
ggctgcactgacttcaccgtggacttggaggccatcctggcggctgtgccggcccgcagg
cagacgctgctcttcagtgccacgctgaccgacacgctgagggagctgcagggcctggcc
accaaccagcccttcttctgggaggctcaggcccctgtgcgtacagtagaacagctggac
cagcgctacctgctagtgcctgagaaggtcaaggatgcctacctggtccacctgatccag
aacttccaagacgagcacgaggactggtccatcatcatcttcaccaacacatgcaagacc
tgtcagattctgtgcatgatgctacgcaaattcaacttccccaccgtggctctgcattcc
atgatgaaacagaaagaacgctttgctgccctgtccaagttcaagtccagcatctaccgg
atcctgatcgcgacagatgttgcctcccggggcctggacattcccacggtacaggtggtc
atcaaccacaacacccccgggctcccgaagatctatatccaccgagtcggccggacagcc
cgtgcagggcggcagggacaggccatcacgctggtgacgcagtatgacatccacctggta
cacgccatcgaggagcagatcaagaagaagctggaggagttctcggtggaggaacctgag
gtgctagagatcctcacacaggtcaacgtggtgcgaagggagtgtgagattaaactggag
gcagccaactttgatgaaaagaaagagattaataagcggaagcagatgatcctggagggg
aaggatcccgacctggaggccaagcgcaaggccgagctggccaaaatcaagcagaagaac
cggcgcttcaaggagaaagtagagcaggcactgcagcggcagaaggccagcggggctggc
cgcagggggtgtccatccagggcccagcctgaggcctgcttgtccccagcacccgctcag
ggcccggcctga
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