Phocoena phocoena (harbor porpoise): 136120935
Help
Entry
136120935 CDS
T11058
Symbol
TRIP13
Name
(RefSeq) pachytene checkpoint protein 2 homolog
KO
K22399
pachytene checkpoint protein 2
Organism
pphc Phocoena phocoena (harbor porpoise)
Pathway
pphc04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
136120935 (TRIP13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pphc03036
]
136120935 (TRIP13)
Chromosome and associated proteins [BR:
pphc03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Others
136120935 (TRIP13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_lid_TRIP13_C
AAA
TRIP13_N
AAA_22
AAA_16
nSTAND3
AAA_18
Viral_helicase1
AAA_28
AAA_14
AAA_33
AAA_5
NPHP3_N
AAA_25
RuvB_N
ATPase_2
Cytidylate_kin
TsaE
RNA_helicase
AAA_24
DUF815
AAA_30
ABC_tran
AAA_11
AAA_7
NACHT
AAA_17
IstB_IS21
bpMoxR
TIP49
Mg_chelatase
ATPase
AAA_19
PduV-EutP
SLFN-g3_helicase
Rad17
NRBF2
nSTAND1
PhoH
AAA_3
Motif
Other DBs
NCBI-GeneID:
136120935
NCBI-ProteinID:
XP_065730740
LinkDB
All DBs
Position
3:638188..651734
Genome browser
AA seq
432 aa
AA seq
DB search
MDEAVGDLKQALPCVAEAPTVHVEVHQRSGSTAKREDLKLSVRKLLTRHNIVFGDYTWTE
FDEPFLARNVQSVSIVDTELKAKGPQPIDLSVCTIALHIFQLNEDGPSSENLEEETENII
AANHWVLPAAEFHGLWDSLVYDVEIKSHLLDYVMTTLLFSDKNVDSTLITWNRVVLLHGP
PGTGKTSLCKALAQKLTIRLSSRYRYGQLIEINSHSLFSKWFSESGKLVTRMFQKIQDLI
DDKDALVFVLIDEVESLTASRNACRAGAEPSDAIRVVNAVLTQIDQIKRHSNVVILTTSN
ITERIDVAFVDRADIRQYIGPPSAAAIFRIYLSCLEELMRCQIVYPRQQLLTLRELEMIG
FIENNVSKLSLLLSEISRKSEGLSGRVLRKLPFLAHALYVQAPTITVEGFLQALSLAVDK
QFEDRKKLSSCV
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atggacgaggccgtgggcgacctgaagcaggcgctgccctgcgtggccgaggcgccgacc
gtccatgtggaggtccaccagcggagcggcagcactgcaaaaagagaagatctaaagctg
agtgttaggaagctcctcaccagacacaacattgtgtttggcgattacacgtggactgag
tttgacgagccttttctggccagaaacgtgcagtctgtgtccattgttgacacggaatta
aaggctaaaggtccacagcccatagatttgagcgtgtgcactattgcacttcacatcttc
cagctgaatgaagatggccccagcagtgaaaatttggaggaagagacagaaaacataatt
gcggcaaaccattgggtgctgcctgcagctgaattccatgggctttgggacagcctggtg
tatgatgtggaaatcaaatctcacctccttgactacgtgatgacaactttactgttttca
gacaagaatgtcgacagcaccctcatcacctggaaccgggtggtcctgcttcacggtcct
ccaggaactggaaaaacatccctgtgtaaagctttagcgcagaaattgaccatcagactc
tcaagcaggtaccggtatggccagttaattgagataaacagccacagcctcttctctaag
tggttttcagaaagtggcaagctggtaactaggatgttccagaagattcaggacttaatt
gatgacaaagatgctctggtgtttgtgctgattgacgaggtggagagcctaacggcttcc
cgcaacgcctgcagggcgggtgccgagccttcggatgccatccgcgtggtcaacgccgtg
ttgacccagatcgatcagatcaaaaggcactccaacgtggtgatcctgaccacgtccaac
atcacggagaggattgacgtggcctttgtggacagagctgacatcaggcagtacattggg
ccgccctccgcagcagccatcttcagaatctacctctcctgcctcgaagagctgatgagg
tgtcagatcgtataccctcgccagcagctgctgaccctccgcgagctggagatgattggc
ttcatcgagaacaacgtgtccaagttgagccttctcctgagtgagatttcgcggaagagt
gagggcctcagcggccgtgtcctgagaaaactcccttttctggctcacgctctgtatgtc
caggcccccaccatcaccgtcgagggcttcctccaggccctgtctctggccgtggacaag
cagtttgaggacagaaagaagctctcgtcgtgcgtgtga
DBGET
integrated database retrieval system
