Phocoena phocoena (harbor porpoise): 136120976 Help Entry 136120976         CDS       T11058                                  Symbol PCDH1 Name (RefSeq) protocadherin-1 isoform X1   KO K16498   protocadherin delta 1 Organism pphc  Phocoena phocoena (harbor porpoise) Pathway pphc03273   Virion - Lassa virus and SFTS virus Brite KEGG Orthology (KO) [BR:pphc00001]  09120 Genetic Information Processing   09125 Information processing in viruses    03273 Virion - Lassa virus and SFTS virus     136120976 (PCDH1)  09180 Brite Hierarchies   09181 Protein families: metabolism    01009 Protein phosphatases and associated proteins [BR:pphc01009]     136120976 (PCDH1)   09183 Protein families: signaling and cellular processes    04515 Cell adhesion molecules [BR:pphc04515]     136120976 (PCDH1) Protein phosphatases and associated proteins [BR:pphc01009]  Protein serine/threonine phosphatases   Phosphoprotein phosphatases (PPPs)    Protein phosphatase-1     PP1-interacting proteins (PIPs)      136120976 (PCDH1) Cell adhesion molecules [BR:pphc04515]  Cadherins   Protocadherins    136120976 (PCDH1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Cadherin Protocadherin Cadherin_2 Cadherin_CELSR2_9th TMEM154 Motif Other DBs NCBI-GeneID:  136120976 NCBI-ProteinID:  XP_065730796 LinkDB All DBs Position 3:complement(119217970..119240043) Genome browser AA seq 1237 aa AA seqDB search MDCRARGLRCPEAALLILEPARMGSLRRSPGPGGQRLLPPALLLALLLLLAPSPGHATRV VYKVPEEQPPNTLIGSLAADYGFPDVGHLYKLEVGAPYLRVDGKTGDIFTTETSIDREGL RECQNQLPGEPCILEFEVSITDLVQNGSPRLLEGQIEVQDINDNTPNFASPVITLPIPEN TNNGSLFSIPVASDRDAGPNGVASYELQVGPEAQGLFKLQVAEDQDGKQPQLIVMGNLDR ERLDSYDLTIKVQDGGNPPRASSALLRVTVLDTNDNAPKFERPSYEAELSENSPIGHSVI QVKANDSDQGANAEIDYTFHQVPEVVRRLLRLDRNTGLITVQGPVDREDLSTLRFSVLAK DRGTNPKSARAQVVVTVKDVNDNAPTIEIRGIGLVTHQDGMANISEDVAEETAVALVQVS DRDEGENAAVTCVVAGDVPFQLRQASETGSDSKKKYFLQTTTPLDYEKVKDYTIEIVAVD SGNPPLSSTNSLKVQVVDVNDNAPVFTQSVTEVAFPENNKPGEVVAEVTASDADSGSNAE LVYSLEPEPAAKGLFTISPETGEIRVKTSLDREQRESYELKVVAADRGSPSLQGTATVLV NVLDCNDNDPKFMLSGYNFSVMENMPALSPVGMVTVIDGDKGENARVRLTVEQDNGDFVI QNGTGTILSSLSFDREQQSTYTFQLKAVDGGVPPRSAYVGVTINVLDENDNAPFITAPSN TSHRLLTPQTRLGETVSQVTAEDIDSGVNAELTYSIAGGNPYGLFQIGSHSGAITLEKEI ERRHHGLHRLVVKVTDRGKPPRYGTALVHLYVNDTLANRTLLETLLGHSLDTPLDIDIAG DPEYERSKQRSNILFGVVAGVVAVALLIALAVLVRYCRQREAKSGYQAGKKETKDLYAPK PSSKVSKGNKSKGKKSKSPKPVKPVEDEDEAGLQKSLKFNLMSDAPGDSPRIHLPLNYPP GSPDLGRHYRSNSPLPSIQLQPQSPSASKKHQVVQDLPPANTFVGTGDTTSTGSEQYSDY SYRTNPPKYPSKQLPHRRVTFSATSQAQELQDPSQHSYYDSGLEESETPSSKSSSGPRLG PLALPEDHYERTTPDGSIGEMEHPENDLRPLPDVAMTGTCTRECSEFGHSDTCWMPGQSS PSRRTKSSALKLSTFVPYQDRGGQEPAGAGSPSPPEDRNTKTAPVRLLPSYSAFSHSSHD SCKDSATLEEIPLTQTSDFPPAATPASAQTAKREIYL NT seq 3714 nt NT seq  +upstreamnt  +downstreamnt atggactgcagggcccgcggcctgcgctgcccagaggcggccctcctgattctggagcct gcccggatggggtccctgaggcgcagcccaggccctggggggcaacggttgctgccgcct gccttgctgctggcacttctgctgctgctagctccatccccaggccacgccactcgggtg gtgtacaaggtgccagaggaacaaccgcccaacaccctcattgggagcctcgcagccgat tatggttttccagacgtgggccacctatacaaactagaagtaggcgccccgtacctgcgg gtggatggcaagacaggcgacatctttaccacggagacctctatcgaccgcgaggggctc cgagaatgccagaaccagctccctggtgagccctgcatcctggagtttgaggtgtctatc acggacctcgtgcagaatggcagcccccggctgctagagggccagatagaggtccaggac atcaatgacaacacgcccaacttcgcctcaccagtcatcacgctgcccatccccgagaac accaacaacggctcactcttctccatcccagtggcttcagaccgcgatgctggccccaac ggtgtggcatcctatgagctgcaggtggggcccgaggcccaggggctatttaagctgcag gtggcagaggaccaggacggaaagcagccgcagctcatcgtgatgggcaacctggaccgg gagcgcttggactcttacgacctcactatcaaggtgcaggatggcggcaaccccccacgc gccagcagcgccctgctgcgagtcactgtgctcgacaccaatgacaatgcccccaagttc gagcggccgtcctacgaggctgagctgtctgagaacagccccataggacactcagtcatc caggtgaaggccaatgactctgaccaaggtgccaacgcagagatcgactacacgttccac caggtgcccgaggttgtgaggcgtcttctgagactggacaggaacacgggacttatcact gtgcagggccccgtggaccgtgaggacctaagcaccctgcgcttctcggtgcttgccaag gaccgaggcaccaaccccaagagtgcccgagcccaagtggtggtgaccgtgaaggacgtg aacgacaatgcccccaccattgagatccggggcatagggctggtgactcaccaagacggg atggctaacatctcagaggacgtggcagaagagacagctgtggccctggtgcaggtatct gaccgagatgagggagaaaacgcagctgtcacctgtgtggtggcaggtgacgtgcccttc cagctccgccaggccagtgagacgggaagtgacagcaagaagaagtacttcctgcagacc accaccccgctcgactatgagaaggtcaaagactacaccattgagattgtggccgtggac tctggcaacccccctctctcgagcaccaactccctcaaggtgcaggtggtggatgtcaat gacaatgcacctgtcttcacccagagtgtcactgaggtcgccttcccagaaaacaacaag ccaggtgaagtggtcgctgaggtcactgccagtgatgccgactcgggctccaatgctgag ctggtttactctctggagcctgagccggctgccaagggcctcttcaccatctcacctgag actggagagatccgggtgaagacatcccttgatagggaacagagggaaagctacgagttg aaggtggtggcagccgaccggggcagccccagcctccaaggcacagccaccgtcctcgtc aacgtgctggactgcaatgacaatgaccccaagtttatgctgagtggctacaacttctca gtgatggagaacatgccggcgctgagtccagtgggcatggtgacggtcattgatggggac aagggggagaacgcccgggtgcggctcacggtggagcaggacaatggtgattttgttatc cagaacggcacgggcaccatcctctccagcctgagcttcgatcgggagcagcaaagcacc tataccttccagctgaaggcggtggacggcggcgtcccacctcgctcggcttacgttggc gtcaccatcaacgtgctggatgagaatgacaatgcaccctttatcaccgccccttccaac acctcccaccggctgctgaccccccagacccgtctgggtgagacggtcagccaggtgaca gctgaggacattgactctggtgtcaacgctgagctgacctatagcatcgccggtggcaac ccttacggactcttccagattgggtcacattccggtgccatcaccctggaaaaggagatt gagcggcgccaccatgggctgcaccgcttagtggtgaaggtcactgaccgcggcaagccc cctcgctatggcacagccttggtccacttgtatgtcaatgacaccctggccaaccgcacc ctgctggagaccctgctgggccacagcctggacacgccgctggacatcgacattgctggg gatccggaatacgagcgctccaagcagcgcagcaacatcctgtttggcgtggtggcgggt gtcgtggccgtggccttgctcatcgccctggccgtgctcgtgcgctactgccggcaacgg gaggccaagagtggctaccaggctggcaagaaggagaccaaggacctgtatgcccccaag cccagcagcaaagtttccaagggaaacaaaagcaagggcaagaagagcaaatctcccaag cccgtgaagccggtggaggacgaggatgaggccgggctgcagaaatccctcaagttcaac ctgatgagcgatgcccctggggacagcccccgcatccacctgcccctcaactacccacca ggcagccctgacctcggccgccactatcgctctaattccccactgccttccatccagctg cagccccagtcaccctccgcctccaagaagcaccaggtggtgcaggacctgccaccagcc aacactttcgtaggcactggggacacgacgtccacgggctctgagcagtactccgactac agctaccgcaccaacccccccaaataccccagcaagcagttacctcaccgccgagtcacc ttctccgccaccagccaggcgcaggagctgcaggacccgtcccagcacagttactacgac agcggcctggaggagtctgagacgccgtccagcaagtcctcctcggggccccgactcggt cccctggctctgcctgaggatcactatgagcgcaccacccccgacggcagcataggagag atggagcaccccgagaacgacctgcgccctttgcctgacgtcgccatgacgggcacatgt acccgggaatgcagcgagtttggccactccgacacgtgctggatgcctggccagtcgtct cccagccgccggaccaagagcagcgccctcaaactctccaccttcgtgccttaccaggac cgaggagggcaggagcccgcgggcgccggcagccccagccccccggaagaccggaacacc aaaacggcccccgtgcgcctcctgccctcctacagtgccttctcccacagtagccatgat tcctgcaaggactcggccaccttggaggaaatccccctgacccagacctcggacttccca cctgcagccacaccggcatctgcccagacggccaagcgcgagatctacctgtga

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