Phocoena phocoena (harbor porpoise): 136121176
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Entry
136121176 CDS
T11058
Symbol
IRX4
Name
(RefSeq) iroquois-class homeodomain protein IRX-4
KO
K24889
iroquois-class homeodomain protein IRX
Organism
pphc Phocoena phocoena (harbor porpoise)
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pphc03000
]
136121176 (IRX4)
Transcription factors [BR:
pphc03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
136121176 (IRX4)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
MRP-S32
Motif
Other DBs
NCBI-GeneID:
136121176
NCBI-ProteinID:
XP_065731073
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Position
3:complement(1273534..1277634)
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AA seq
522 aa
AA seq
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MSYPQFGYPYSSAPQFLMATNSLSTCCESGGRTLADSRPSASAQAPVYCPVYESRLLATA
RHELNSAAALGVYGGPYGGSQGYGNYVTYGSEASAFYSLNSFDSKDAPGSAHAGLAPAAA
TAYYPYEPALGQYPYDRYGTMDSGTRRKNATRETTSTLKAWLQEHRKNPYPTKGEKIMLA
IITKMTLTQVSTWFANARRRLKKENKMTWPPRNKCADEKRPYAEGEEEEGGEEEARAQPL
KSTKGAEPTDKEKDLELSDLDDFDPLEGEPPECELKPPFQPLDGGLDRVPTVPDGPSAPG
KEAPGALRMPLAAGGGATLEQDLERARSCLRSTAARPEHQAGAGAGVGPQACEPKLGFAP
AGASAGLEAKPRIWSLAHTATAAAATALGQTEFPSCMLKRRGPAGPAAPSSAPASSSPAA
PAPAGALDRHQDSPVTSLRNWVDGVFHDPILRHSTLNQAWATAKGALLDPGPLGRSLGGG
ANVLTTPLARSFPPAAPQDAPASGAAKELLATPKAGGKPFCA
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atgtcctacccgcagtttgggtacccctactcctcggcaccccagttcctgatggccacc
aactccctgagcacgtgctgcgaatccggtggccgcacgctggccgactccaggccgtct
gcctcagcccaggcgcccgtctactgcccggtctacgagagccggctgctggccaccgcg
cgccacgagctgaactcggcggcggcgcttggcgtctatgggggcccctacggcggctcg
cagggctacggcaactacgtgacctacggttctgaggcgtctgccttttactcgctgaac
agcttcgactccaaggacgcaccgggatctgcgcatgcgggcctcgctccggctgcagcc
acagcctactacccctacgagccggcgttgggccagtacccctacgacaggtacgggacc
atggacagcggcacgcggcggaagaacgccacgcgcgagaccaccagcaccctcaaggcc
tggctgcaggagcaccgcaagaacccctaccccaccaagggcgagaagatcatgctggcc
atcatcaccaagatgaccctcacgcaggtctccacctggttcgccaacgcgcgccggcgc
ctcaagaaggagaacaagatgacgtggccgccgaggaacaagtgtgcggatgagaagcgg
ccctacgcggagggcgaggaggaagaggggggcgaggaggaagccagggcgcagcccctc
aagagcaccaaaggtgcagagcccacagacaaagagaaggatctggagctcagcgacttg
gacgacttcgaccccctggagggggagcccccagagtgcgagctgaagccgcccttccaa
cccctggatggaggcctggatcgagtccccaccgtgccagacggccccagcgccccaggg
aaggaggctccgggcgccctccggatgcccctggccgccgggggtggggccactctggaa
caggacctggagagggcccggagctgcctccggagcacggcggctcggccggagcaccag
gcgggcgcgggcgcgggggttggcccgcaggcctgcgagcctaagctgggctttgctcca
gcgggggcgtcggcgggcctcgaggccaagccgcgcatctggtccctggcacacacggcc
accgcggccgccgccaccgccctcggccagactgagtttccctcgtgcatgctcaagcgc
cgtggccccgctggccctgcggccccctcctcggcgcccgcctcctcctcgcctgcggcc
ccggctcccgccggtgccctggacaggcaccaggactccccggtaaccagtctcagaaac
tgggtggacggggtcttccacgaccccatcctcagacacagcactttgaaccaggcctgg
gccaccgccaagggcgccctcctggacccggggccgctgggccgctcgctgggggggggc
gccaacgtgctgacgacgcccctggcgcgctccttcccgcccgccgcgccccaagacgcc
cccgcctccggcgcagccaaggagctgctggccacgcccaaggccggcggcaagcccttc
tgcgcctag
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