Phocoena phocoena (harbor porpoise): 136121190
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Entry
136121190 CDS
T11058
Symbol
IRX1
Name
(RefSeq) iroquois-class homeodomain protein IRX-1
KO
K24889
iroquois-class homeodomain protein IRX
Organism
pphc Phocoena phocoena (harbor porpoise)
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pphc03000
]
136121190 (IRX1)
Transcription factors [BR:
pphc03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
136121190 (IRX1)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Dicty_REP
MRP-S32
Astro_capsid_p
Motif
Other DBs
NCBI-GeneID:
136121190
NCBI-ProteinID:
XP_065731090
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Position
3:2737642..2742555
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AA seq
476 aa
AA seq
DB search
MSFPQLGYPQYLSAAGPGAYGGERPGVLAAAAAAAAAASSGRPGAADLGAGAGAAAVTSV
LGMYAAAGPYAGAPNYSAFLPYAADLSLFSQMGSQYELKDNPGVHPATFAAHTAPAYYPY
GQFQYGDPGRPKNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFAN
ARRRLKKENKVTWGARSKDQEDGTLFGSDTEGDPEKAEDDEEIDLESIDIDKIDEHDGDQ
SNEDDEDKAEAPRAPAAPAALARDQGSPLAAADTFKPQDSPLGLAKEVPEPGSTCLLSPG
AAAGGLQGAPHSKPKIWSLAETATSPDGAPKASPPPAGHAGTHGPPAGAPLQHPAFLPSH
GLYTCHIGKFSNWTNGAFLTQGSLLNVRSFLGVGAPHGPHLSAPPPPPQPPVTVAAGVLH
GDKASSRSSPSLPERDLIPRPDSPAQQLKSPFQPVRDNSLAPQEGTPRILAALPSA
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgtccttcccgcagctgggctacccgcagtacctgagcgccgcggggcccggcgcctac
ggcggcgagcgcccgggagtgctggccgcggctgccgcggcggccgccgccgcctcgtcg
ggccggcccggggcggcggatctgggcgcgggcgcgggcgcggccgccgtcacctcggtg
ctgggcatgtacgcggcggccggcccgtacgcgggcgcgcccaactacagcgccttcctg
ccctacgccgcggacctcagcctcttctcgcagatgggttcacagtatgagctcaaggac
aaccccggggtgcaccccgccaccttcgccgcccacacggcgccggcctattacccctac
gggcagttccagtacggggatcccgggcggcccaagaacgccacgcgagagagtaccagt
accctcaaggcctggctcaacgagcaccgcaagaacccctaccccaccaagggcgagaag
atcatgctggccatcatcaccaagatgaccctcacgcaggtctccacctggttcgccaac
gcgcgccggcgcctcaagaaggagaacaaggtgacgtggggcgcgcgcagcaaggaccag
gaggacggcactctcttcggaagcgataccgagggggaccctgagaaggccgaggacgac
gaggagatcgacctggagagcatcgacatcgacaagatcgacgagcacgacggcgaccag
agcaacgaggatgacgaggacaaagccgaggcgccgcgcgcgcccgccgcgcctgccgcc
ctcgcccgggaccagggctcgccgctggcggccgccgacacgttcaagccccaagactcc
cccctgggcctggccaaggaggtcccggagcccggcagcacttgcctgctgagtccgggc
gccgcggcgggcggcctgcagggcgcgccgcacagcaagcccaagatctggtcgctggcc
gagacggccaccagccccgacggcgcgcccaaggcctcgccgcctcccgccggccatgcg
ggcacgcacgggccccccgcgggcgcgccgctgcaacacccggccttcctgcccagccac
ggactgtacacctgccacatcggcaagttctccaactggaccaacggcgcgttcctcacg
cagggctcgctgctcaacgtgcgctccttcctgggcgttggcgcgccccacggcccgcac
ttgtccgcgccgccgccgccgccgcagccacccgtcaccgtggccgcgggggtgctccac
ggcgacaaggcctcgtcccgcagcagcccctcgctcccagagagagacctcatccccagg
ccggactcgccggcacagcagttaaagtcgcccttccagcccgtgcgcgacaactcgctg
gccccgcaggaggggacgccgaggatcctagcagccctcccatcagcctga
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