Phocoena phocoena (harbor porpoise): 136121274
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Entry
136121274 CDS
T11058
Symbol
SLC1A6
Name
(RefSeq) excitatory amino acid transporter 4 isoform X1
KO
K05617
solute carrier family 1 (high affinity glutamate/aspartate transporter), member 6
Organism
pphc Phocoena phocoena (harbor porpoise)
Pathway
pphc04082
Neuroactive ligand signaling
pphc04721
Synaptic vesicle cycle
pphc04724
Glutamatergic synapse
pphc05017
Spinocerebellar ataxia
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
136121274 (SLC1A6)
09150 Organismal Systems
09156 Nervous system
04724 Glutamatergic synapse
136121274 (SLC1A6)
04721 Synaptic vesicle cycle
136121274 (SLC1A6)
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
136121274 (SLC1A6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pphc02000
]
136121274 (SLC1A6)
Transporters [BR:
pphc02000
]
Solute carrier family (SLC)
SLC1: High-affinity glutamate and neutral amino acid transporter
136121274 (SLC1A6)
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Gene cluster
GFIT
Motif
Pfam:
SDF
DUF7844
Motif
Other DBs
NCBI-GeneID:
136121274
NCBI-ProteinID:
XP_065731200
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Position
3:complement(159457439..159477097)
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AA seq
564 aa
AA seq
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MSSHGNSLFLRESGQRLGRVGLLQRLLDSLQQRALRTRLRLQTMTCEHVLRFLRRNAFIL
LTVSAVVIGVSLAFALRPYQLSYRQVKYFSFPGELLMRMLQMLVLPLIVSSLVTGMASLD
NKATGRMGMRAAVYYMVTTVIAVFIGILMVTIIHPGKGSKEGLHREGRIETVPTADAFMD
LVRNMFPPNLVEACFKQFKTQYSTRLVTRTIVRTDNGSELGTSMPPLSSMENGSSLLENV
TRAIGTLQEVLSFEETVPVPGSANGINALGLVVFSVAFGLVIGGMKHKGRVLRDFFDSLN
EAIMRLVGIIIWYAPVGILFLIAGKILEMEDMAVLGGQLGMYTLTVIVGLFLHAGGILPL
IYFLITHRNPFPFIGGILQALITAMGTSSSSATLPITFRCLEEGLGVDRRITRFVLPVGA
TVNMDGTALYEALAAIFIAQVNNYELNLGQITTISITATAASIGAAGIPQAGLVTMVIVL
TSVGLPTEDITLIIAVDWFLDRLRTVTNVLGDSIGAAVIEHLSQRELELQEAELTLPSLG
KPYKSLMAQEKGASRGRGGNESAM
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atgagcagccatggcaacagcttgtttctgcgggagagtggccagcggctgggccgggtg
ggcttgctgcagcggctgctggacagcctgcagcagagagcgctgagaacgcgcttgcgc
ctgcagaccatgacgtgcgagcacgtgctgcgcttcctgcgccggaacgccttcatcttg
ctgaccgtcagcgccgtggtcattggggtcagcctggcctttgccctgcggccgtaccag
ctgagctaccgccaggtcaagtacttctctttccctggagagcttctcatgaggatgcta
cagatgctggtgctgccactcattgtctccagtctggtcacaggtatggcgtccttggat
aacaaggcaacagggcggatggggatgcgggcagctgtatactacatggtgaccactgtc
atcgcggtcttcatcggcatccttatggtcaccatcatccatcctgggaagggctccaag
gaggggctgcaccgagagggccggatcgagaccgttcccacggctgatgccttcatggac
ctggtcagaaatatgtttccgcccaaccttgtggaggcctgcttcaaacagtttaagacg
cagtacagcacgaggttggtaaccaggaccattgtgaggacagataatggatctgagctg
ggcacctccatgcctcctttatcctcaatggagaacggaagcagcctcttggaaaatgtc
acacgggccataggcaccttgcaggaggtgctgagctttgaggagactgtgcctgtgcct
ggctcagccaatggcatcaacgccctgggccttgtggtcttctcagtggccttcgggctg
gtcatcggtggcatgaaacacaagggccgagtcctgcgggatttcttcgacagcctcaat
gaggctattatgaggctggtgggcatcattatctggtatgcacctgtgggcatcctgttc
ctgattgctggcaagatcctagagatggaagacatggctgtccttgggggtcagctgggc
atgtacaccctgaccgtcatcgtgggtttgttccttcatgccggtggcatcctgcctctc
atctacttcctcatcacccatcggaatcctttccccttcattgggggaatactgcaggcc
ctcatcactgccatgggcacgtcttccagctctgcgacactgcccatcaccttccgctgt
ctggaggagggcctgggtgtggaccgccgcatcaccaggtttgtgctgccggtgggggcc
accgtcaacatggatggcactgccctctacgaggccctggccgccatcttcatcgctcaa
gtcaacaactacgaactcaacctgggtcagatcacaactatcagtatcacggctacagca
gccagcattggggctgctggcatcccccaggcaggtctggtcaccatggtcattgtgcta
acctcggtcggcctgcccactgaagatatcacgctcatcatagctgtggactggttcctt
gatcgacttcgcaccgtgaccaatgtgctgggggactctattggagcagcagtcattgag
catttgtctcagcgggagctggagctgcaggaagctgaactcaccctccccagcctgggg
aagccctacaagtctctcatggcacaagagaagggggcgtccaggggacggggaggcaac
gagagtgccatgtga
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