Phocoena phocoena (harbor porpoise): 136121307
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Entry
136121307 CDS
T11058
Symbol
RNF180
Name
(RefSeq) E3 ubiquitin-protein ligase RNF180
KO
K15708
E3 ubiquitin-protein ligase RNF180 [EC:
2.3.2.27
]
Organism
pphc Phocoena phocoena (harbor porpoise)
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pphc04121
]
136121307 (RNF180)
Enzymes [BR:
pphc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
136121307 (RNF180)
Ubiquitin system [BR:
pphc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
136121307 (RNF180)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNF180_C
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_UBOX
zf-RING_2
zf-RING_5
RING_XB3-XBAT31
Motif
Other DBs
NCBI-GeneID:
136121307
NCBI-ProteinID:
XP_065731242
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All DBs
Position
3:51153959..51415309
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AA seq
591 aa
AA seq
DB search
MKRSKELITKNHNQEEISILRCWKCRKCIAGSGCFMECLENQVTKDRHDSADDQNICHVW
HMDVEALPEWIHSLIQKAQWTVGKLNCPFCGARLGGFNFVSTPKCSCGQLAAVHLSKSRT
DYQPTRSGRLMRPSLKYLSHPRVQSGCDKETLLTGDASKNRNHGLLNMAQNNNGPGRLTE
ALCLEVRSTYFKMKNEKLLFKADPKCQLFVPQLLTGRCTTKAFHRKSHSLDLDISEKLTL
LPTLYEIHSKTTVYPRLNETQPIDLSGLPLESSKNNRSFQISSSFDPNMLLQRFSVTPRE
TQTQRGGEFQCGLEASAVYSGHASSNNLTFLMDLPSASRSTLEAPDQEEHLSPLDFLHSG
SYSLGAINQRLSKREKSKLKNLRRKQRRHERWLQKQGKCPGVGLLDHMTLDNEMSTDDDN
EYAEEKESYICAVCLDVYFNPYMCYPCHHIFCEPCLRTLAKDNAASTPCPLCRTIISRVF
FQTELNNATKTFFTKEYLKRKQSFQKSSSAKWPLPSRRKAFHLFGGFHRRAAPVTRRQFP
HGAHRMDYLHFEDDSRGWWFDMDMVIIYIYSVNWVIGFIVFCFLCYFFFPF
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgaagagaagtaaagaattgataactaagaatcataatcaagaagaaataagtattctt
cgttgttggaaatgtagaaaatgcatagcaggttctggttgtttcatggaatgtcttgag
aatcaagtgactaaggatagacatgattcagctgatgatcaaaatatttgtcatgtgtgg
catatggatgtagaagcccttccagagtggatacacagcctaatacaaaaagcccagtgg
acagttggaaaactgaattgccctttctgtggggcccgtttagggggctttaattttgtc
agcactccaaaatgttcctgtggccagcttgcagctgtacatctctccaaaagccggacc
gattatcagccaacacggtcaggccgactaatgagaccctcgctgaaatacttgtcacat
cctagagttcagtcaggttgtgacaaggaaactctgctgacaggtgacgcctccaaaaac
agaaatcacgggcttttaaacatggcccaaaataataatggtcctggaagattaacggaa
gcactctgcctggaggtacggtcaacgtatttcaagatgaagaacgaaaaactgctcttc
aaagcagatccaaaatgtcagctttttgttccgcagcttttgactggcagatgcactacg
aaagcttttcatagaaaatcacatagcttggatctggacatcagtgagaaactgacttta
ttacccactttatatgaaatccatagtaagactactgtgtatcccaggctaaatgaaacg
cagcctattgacctttcgggcttgcctttagaatcgagtaaaaataaccgttcctttcag
atttcatccagttttgatcctaatatgctgctgcaaagattttcagtgactccccgtgag
acccagacacaaagaggaggagaatttcagtgtggtctagaagcttctgcagtgtactct
ggccatgctagttctaacaacctgactttcctgatggacctgccctcagctagcaggagc
acactggaggccccagaccaggaagagcacctctctcctctggacttcctgcactcaggc
agttattcattgggtgccattaatcagaggctcagtaagagagaaaagagcaagctgaag
aatctgagacggaaacaacgaaggcatgaaagatggctacagaagcagggtaaatgtcca
ggagtgggattgctggatcatatgactttggataatgagatgagtacagatgatgacaat
gaatatgcagaagaaaaggagagctacatctgtgcagtgtgtctggatgtttatttcaac
ccctacatgtgttacccttgccaccacatcttctgtgagccctgcttacggactcttgcc
aaagacaatgccgcaagcactccctgcccattgtgtcggacaattatttccagagtcttt
ttccagacagaactgaacaatgccacaaaaacattctttactaaagaatatttgaaaaga
aaacaaagctttcagaaatccagctctgcaaagtggcctctaccaagccgcagaaaagca
ttccatctttttggaggtttccacagacgtgcagctccagttacaagaaggcagtttcca
catggtgcacataggatggattatttgcactttgaggatgatagccgtggatggtggttt
gacatggatatggtgatcatctatatttattcagtgaactgggtcattggattcattgtt
ttctgctttctttgctattttttctttccattttag
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