Phocoena phocoena (harbor porpoise): 136121316
Help
Entry
136121316 CDS
T11058
Symbol
POLRMT
Name
(RefSeq) DNA-directed RNA polymerase, mitochondrial isoform X1
KO
K10908
DNA-directed RNA polymerase, mitochondrial [EC:
2.7.7.6
]
Organism
pphc Phocoena phocoena (harbor porpoise)
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
pphc03029
]
136121316 (POLRMT)
Enzymes [BR:
pphc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
136121316 (POLRMT)
Mitochondrial biogenesis [BR:
pphc03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Mitochondrial RNA polymerase
136121316 (POLRMT)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol
RPOL_N
Cas_Csy4
Motif
Other DBs
NCBI-GeneID:
136121316
NCBI-ProteinID:
XP_065731256
LinkDB
All DBs
Position
3:173181499..173194742
Genome browser
AA seq
1238 aa
AA seq
DB search
MSAVRWGRGAAGFGRALWPAGSPGLLAEEGALGGVWSRKRSSTASPCEQDRRKDWGHAEL
LEVLKARVRQLQAEGVAEVTVKRVAVARAPEAGGAQPPRQAQAGAKGAAATLSSRWAQKL
DSDQQLMEKRKQRLEGKLQERVEKGAWQKQLRLEPRLLSRKLASQLQHWEQGAPRSPWEE
QLAQLLQEAPHRLSSEAAAAPADRGPESRLEGQRQRLLSFFECCLLTGHLPLAHHVLVTH
HSKSQQQRLLTLSMYNMVMLGWARQGSFKELTYVFFMLKDAGLAPDLQSYAAALQCMGRL
DQDAGTIRRCLKQMAQDGLQLQGLFTAVPLSAEERAELLRAVRKAKPTFTPPRLPVPPPQ
VNTSPLLREIYAKDPAVSYPRLHLSLKELQGLFQQQLRVEMATTITVESVEKVPLLTKEV
LHARKTLAGLRTRWRTALYRELQETKESEAHAAREGRLSLFPYLCLLSEKEIVRVLLQTL
QALPAQGESLLFLAHELGLRVFKRKQLRNEVQELEQRYSKYLHLLASDTQVAEPCLPRQH
WEALGVPEAPHEQPWPMSVVVQLGKQLAEVLVRAAQMPSSLAAPRSPGTLIPVLYHVYSF
RSFRQIGILKPHPAFTQLLETAAERTLTFESTDVPMLCPPLPWTSPHSGAFLLSPTKMMR
SVEGSQQHQLLLERCPPAELHGALDALTQLGNCAWRVNGRVLDLVLELFTDKGCPRLGVP
APPSEAPRPPEGRQAPKRCLLPEVSPAEKAEMRRELARRLKVAREMQSLRADALYRLSLA
QHLRHRVFWLPHNMDFRGRTYPCSPHFNHLGSDLARALLEFAQGRPLGPHGLNWLKIHLV
NLTGLKKRESLQARRDYADELMEDILDSADRPMTGRKWWMEADEPWQALACCMEVARAVR
APDPTAYVSHFPVHQDGSCNGLQHYAALGRDSVGAASVNLLPSDLPQDVYSEVAAQVEVF
RRQDAEQGVQVAQVLEGFISRKVVKQTVMTVVYGVTRYGGRLQIEKRLREIHDFPQDFVW
EASHYLVRQVFNSLQEMFSGTRSIQRWLTESARLISHTGSAVEWVTPLGIPIIQPYHRDS
KVMIKGGLQSLTFSSSVDTSQKPNTLKQKNGFPPNFIHSLDSSHMMLTALHCYRRGLSTG
APHCCRRKGLTFVSVHDCFWTHAADVAVMNQVCREQFVRLHSQPILHNLSRFLIERFCSD
PRTSKSIWVSRLTDTLLSVPKTGTFNLEQVKHSTYFFS
NT seq
3717 nt
NT seq
+upstream
nt +downstream
nt
atgtcagctgtacgctggggccgcggcgcggcggggttcgggagggccctgtggccggcg
ggatcccccggcctcctggccgaggaaggggcccttggtggcgtctggagccgtaagagg
agctcgactgccagcccttgtgagcaggaccgccggaaggactggggccatgccgagctg
ctggaggtgctcaaggcgcgggtgcggcagctgcaggccgagggcgtggcagaggtgacg
gtgaagagggtggccgtggctcgagccccggaggctggcggcgcccagccacccaggcag
gcccaggccggggccaagggggccgccgccacactcagcagccgctgggcgcagaaactg
gacagcgatcagcagctgatggagaagcgcaagcagcggctggaggggaagctgcaggag
cgtgtggagaagggggcctggcaaaagcagctgcgcctggagccccggctgctgagcagg
aagctggcgagccagctgcagcactgggagcagggggcaccccggagcccgtgggaggag
cagctggcacagctgctgcaggaggccccacacaggctgagcagcgaggcggcggcggct
ccggcggacagaggccccgagtcgcggctggagggccagcggcagaggctcctgtccttc
tttgagtgctgcctgctcacgggccacctgcccctggcccaccacgtgctggtcacccac
cacagcaagtcccagcagcagcggctgctcacgctctccatgtacaacatggtcatgctc
ggctgggctcgccagggctccttcaaagagctgacgtacgtgttcttcatgctgaaagac
gccggcctcgccccagacctgcagtcctatgcggctgccctgcagtgcatggggcgcctg
gaccaggatgctggtaccatccgaaggtgcctgaagcagatggcgcaggacgggctacag
ctgcaggggctcttcacggctgtgccgctgagcgccgaggagcgggctgagctcctgcgg
gccgtgcgcaaggccaagcccaccttcacccccccgcggctgcccgtgcccccgccccag
gtcaacacctcgccgctgctccgggagatctacgccaaggatcccgctgtgtcctaccca
aggctgcacttgtccctgaaggagctgcagggcctcttccaacagcagcttcgcgtggag
atggccaccaccatcaccgtggagtccgtggagaaggttccactgctgaccaaggaggtc
ctgcatgcgcggaagaccctggcaggcctgcgcacccgatggaggacggcgctgtaccgg
gagctgcaagagaccaaggagagcgaggcccacgctgctcgagaaggccgcctctcactc
ttcccgtacctgtgcctgctcagcgagaaggagattgtgagggtgctgctgcagaccctg
caggcgctgcccgcgcagggagagtcacttctcttcctggcacacgagctgggtctgcgc
gtcttcaagaggaagcagctcagaaacgaggtgcaggaactggagcagcgctactccaag
tacctgcacctgctggcctccgacacccaggtggcggaaccgtgcctgccgcggcagcat
tgggaggcactgggggtgcctgaggccccccacgagcagccctggcccatgtcagtggtg
gtgcagctgggcaagcagctggcggaggtgctggtgcgggccgcgcagatgcccagcagc
ctggcagcgccccggagccctggcacactcatccctgtgctctaccacgtgtactccttc
cgcagcttccgccagatcgggatcctgaagcctcacccggccttcacgcagctgctggag
acggcggcagagcgcacactgacctttgagtcgacggacgtgcccatgctgtgcccgcca
ctgccctggacgtcgccccactcgggcgcctttctgctgagccccaccaagatgatgcgc
tcagtggagggcagccagcagcaccagctcctgctggagcgctgcccgccggccgagctg
catggcgccctggatgccctcacccagctgggcaactgtgcctggcgggtcaacgggcgc
gtgctggacctggtgctggagctcttcactgacaagggctgccctcgcctgggtgtgccc
gccccaccctccgaggccccccggccacccgagggccgtcaggctcccaagcgctgcttg
ctgcccgaggtctcgcccgctgaaaaggctgagatgcggcgggagctggcccggcgcctg
aaggtggcacgggagatgcagagcctgcgcgccgatgccctgtaccgcctgtcgctggcc
cagcacctgcggcaccgtgtcttctggctgccgcacaacatggacttccgcggccggacc
tacccctgctcgccgcatttcaaccacctgggcagcgacctggcccgcgcactgctggag
ttcgcccagggccgcccgctcggcccccacggcctcaactggctcaagatccacctggtc
aacctcacggggctcaagaagcgcgagtcgctgcaggcacgccgggactatgcggacgag
ctgatggaggacatcctggactcggcggaccggcccatgacgggccgcaagtggtggatg
gaggcggatgagccctggcaagccctggcctgctgcatggaggttgcccgggcggtgcgt
gcccccgaccccaccgcctacgtctcccacttcccagttcaccaggacggctcctgtaac
ggcctgcagcactacgccgccctgggccgggacagcgtgggggccgcctccgtcaacctg
ttgccctcggacctgccgcaggacgtgtacagtgaggtggctgcacaggtggaggtgttc
cgcaggcaggacgccgaacagggtgtgcaggtagcccaggtgctggagggtttcatcagc
cgcaaggtggtcaagcagacggtgatgaccgtagtgtacggggtcacccgctacgggggc
cgcctgcagatcgagaagcgcctccgggagatccacgacttcccccaggacttcgtgtgg
gaggcttctcactacctcgtgcgccaggtgttcaacagcctgcaggagatgttctcgggc
acccggtccatccagcgctggctgaccgagagcgcccggctcatctcccacacgggctcg
gccgtggagtgggtcacgcccctgggcatccccatcatccagccctaccaccgagactcc
aaggtcatgatcaaaggcgggctccagagcctcaccttcagcagcagcgtggacaccagc
cagaagcccaacacgctgaagcagaagaacggcttcccgcccaacttcatccactcactg
gactcctcgcacatgatgctcacggccctgcactgctacaggcgtggcctctccacgggg
gcccctcactgctgccgcaggaagggcctgaccttcgtctcggtgcacgactgcttctgg
acccacgccgctgacgttgcggtcatgaaccaggtctgtcgcgagcagttcgtccgtctg
cacagccagcccattctccacaacctgtccaggttcctgatcgagcggttctgctctgac
cccaggacctccaagagcatctgggtctccaggctgacggacacgctgctgtctgtgccc
aagacagggacattcaacctggagcaggtgaagcactccacgtacttcttcagctga
DBGET
integrated database retrieval system
