KEGG   Phocoena phocoena (harbor porpoise): 136121324
Entry
136121324         CDS       T11058                                 
Symbol
WDR18
Name
(RefSeq) WD repeat-containing protein 18
  KO
K14829  pre-rRNA-processing protein IPI3
Organism
pphc  Phocoena phocoena (harbor porpoise)
Brite
Ribosome biogenesis [BR:pphc03009]
 Eukaryotic type
  Pre-60S particles
   5-FMC complex
    136121324 (WDR18)
SSDB
Motif
Pfam: WD40_alt WD40 WD40_Prp19 WD40_CDC20-Fz Beta-prop_EML_2 WD40_WDHD1_1st EIF3I Beta-prop_TEP1_C Beta-prop_TEP1_2nd Beta-prop_EML NBCH_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_1st WDR55 Beta-prop_SPT8 WD40_MABP1-WDR62_2nd Beta-prop_WDR75_1st Beta-prop_IFT122_1st ANAPC4_WD40 Beta-prop_IFT140_1st Beta-prop_SCAP Beta-prop_Vps41 Beta-prop_DCAF4 WDR90_beta-prop_4th Beta-prop_RIG_2nd Beta-prop_WDR75_2nd Beta-prop_Nup120_160 Beta-prop_VPS8 WDR54 Beta-prop_WDR19_1st Beta-prop_IP5PC_F Beta-prop_DCAF12 Ge1_WD40
Other DBs
NCBI-GeneID: 136121324
NCBI-ProteinID: XP_065731284
LinkDB
Position
3:complement(172924258..172930070)
AA seq 443 aa
MTHVLGGGESMMAAPVEVAVCTDSAAQLWSCVVWELHSGANLLTYRGGQAGPRGLALLNG
EYLLAAQLGKNYISAWELQRKDQLQQKIMCPGPVTCLTTSPNGLYVLAGITESIYLWEVS
TGNLLVILSRHYQDVSCLQFTGDSSHFVSGGKDCLVLAWSLCSVLQADPSRTPAPRHVWS
RHTLPITDLHCGFGGPLARVATASLDQTVKLWEVSSGELLLSVLFDVSIMAVTMDLAEHH
MFCGGSDGSIFQVDLCTWPGQREKSFQPEQDHGKVFRGHRNQVTCLSVSTDGSVLLSGSH
DETVRLWDVQSQQCLRTVALKGPVTNACIVLAPVCMLSPDCRPSLPLPHFNKHLLGAEHG
DEPRHGGLTLRLGLHQQGSEPSYLERVEQLRGVMYSTLEKSVLGGQDQLRIRVAELEDEV
RNLRKINRDLFDFSTRIITRPAK
NT seq 1332 nt   +upstreamnt  +downstreamnt
atgacgcatgttctgggcggtggagaaagcatgatggcggcgcccgtggaggtggccgtg
tgtactgactcggcggcccagctgtggagctgcgtcgtgtgggagctgcactcgggcgcc
aatctgctcacataccgcggcggccaggccgggcctcgcggcctggcgctgctcaatggc
gagtacttgctggcggcgcagctgggcaagaactatatcagcgcctgggagctacagagg
aaggaccagcttcagcagaagatcatgtgccccggaccggtcacctgtcttaccacgtcg
cccaatggcctctatgttctggcagggatcacagagagcatatacctgtgggaggtttcc
acggggaaccttctggtcatcctgagccgccactaccaggatgtgtcgtgtctgcagttc
acgggggacagcagccacttcgtctcggggggcaaggactgcctggtgctggcttggagc
ctctgcagcgtgctgcaggcagacccctcccggacccccgccccccgacacgtgtggtct
cgccacaccctccccatcacagacctgcactgcggctttggtgggcccctggcccgggtg
gccaccgcctcgctggaccaaacagtgaagctgtgggaggtctcctctggcgagctgctg
ctgtctgtgctcttcgacgtgagcatcatggccgtgaccatggacctggctgagcaccac
atgttctgcggtggtagtgacggctccatcttccaggtcgacctctgtacctggcccggg
cagagagaaaagagcttccagccggagcaggaccacgggaaggtgttcagagggcacagg
aaccaggtgacctgcctgtcagtgtccacggatggcagcgtgctactctcgggctcccac
gacgagacggtgcgcctctgggatgtgcagagccagcagtgcctcaggacggtggctctc
aaaggccccgtgaccaacgcctgcatcgtgctggcgccagtctgcatgctgagccccgac
tgcaggcccagcctgcccttgccgcacttcaacaagcacctgctgggtgcagagcacggg
gacgagccgcgccacgggggcctcacgctgcgcctgggcctccaccagcaggggtcggag
cccagctacctggagcgggtggaacagctgcgcggggtgatgtacagcacgttggagaag
agcgtgctgggtggccaggaccagctgcggatccgcgtggcagagctggaggacgaggtg
cggaacctgcgcaagatcaaccgcgacctctttgacttctccacgcgtatcatcactcga
ccggccaagtga

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