Phocoena phocoena (harbor porpoise): 136121324
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Entry
136121324 CDS
T11058
Symbol
WDR18
Name
(RefSeq) WD repeat-containing protein 18
KO
K14829
pre-rRNA-processing protein IPI3
Organism
pphc Phocoena phocoena (harbor porpoise)
Brite
Ribosome biogenesis [BR:
pphc03009
]
Eukaryotic type
Pre-60S particles
5-FMC complex
136121324 (WDR18)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_alt
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
EIF3I
Beta-prop_TEP1_C
Beta-prop_TEP1_2nd
Beta-prop_EML
NBCH_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_1st
WDR55
Beta-prop_SPT8
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
Beta-prop_IFT122_1st
ANAPC4_WD40
Beta-prop_IFT140_1st
Beta-prop_SCAP
Beta-prop_Vps41
Beta-prop_DCAF4
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_WDR75_2nd
Beta-prop_Nup120_160
Beta-prop_VPS8
WDR54
Beta-prop_WDR19_1st
Beta-prop_IP5PC_F
Beta-prop_DCAF12
Ge1_WD40
Motif
Other DBs
NCBI-GeneID:
136121324
NCBI-ProteinID:
XP_065731284
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Position
3:complement(172924258..172930070)
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AA seq
443 aa
AA seq
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MTHVLGGGESMMAAPVEVAVCTDSAAQLWSCVVWELHSGANLLTYRGGQAGPRGLALLNG
EYLLAAQLGKNYISAWELQRKDQLQQKIMCPGPVTCLTTSPNGLYVLAGITESIYLWEVS
TGNLLVILSRHYQDVSCLQFTGDSSHFVSGGKDCLVLAWSLCSVLQADPSRTPAPRHVWS
RHTLPITDLHCGFGGPLARVATASLDQTVKLWEVSSGELLLSVLFDVSIMAVTMDLAEHH
MFCGGSDGSIFQVDLCTWPGQREKSFQPEQDHGKVFRGHRNQVTCLSVSTDGSVLLSGSH
DETVRLWDVQSQQCLRTVALKGPVTNACIVLAPVCMLSPDCRPSLPLPHFNKHLLGAEHG
DEPRHGGLTLRLGLHQQGSEPSYLERVEQLRGVMYSTLEKSVLGGQDQLRIRVAELEDEV
RNLRKINRDLFDFSTRIITRPAK
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgacgcatgttctgggcggtggagaaagcatgatggcggcgcccgtggaggtggccgtg
tgtactgactcggcggcccagctgtggagctgcgtcgtgtgggagctgcactcgggcgcc
aatctgctcacataccgcggcggccaggccgggcctcgcggcctggcgctgctcaatggc
gagtacttgctggcggcgcagctgggcaagaactatatcagcgcctgggagctacagagg
aaggaccagcttcagcagaagatcatgtgccccggaccggtcacctgtcttaccacgtcg
cccaatggcctctatgttctggcagggatcacagagagcatatacctgtgggaggtttcc
acggggaaccttctggtcatcctgagccgccactaccaggatgtgtcgtgtctgcagttc
acgggggacagcagccacttcgtctcggggggcaaggactgcctggtgctggcttggagc
ctctgcagcgtgctgcaggcagacccctcccggacccccgccccccgacacgtgtggtct
cgccacaccctccccatcacagacctgcactgcggctttggtgggcccctggcccgggtg
gccaccgcctcgctggaccaaacagtgaagctgtgggaggtctcctctggcgagctgctg
ctgtctgtgctcttcgacgtgagcatcatggccgtgaccatggacctggctgagcaccac
atgttctgcggtggtagtgacggctccatcttccaggtcgacctctgtacctggcccggg
cagagagaaaagagcttccagccggagcaggaccacgggaaggtgttcagagggcacagg
aaccaggtgacctgcctgtcagtgtccacggatggcagcgtgctactctcgggctcccac
gacgagacggtgcgcctctgggatgtgcagagccagcagtgcctcaggacggtggctctc
aaaggccccgtgaccaacgcctgcatcgtgctggcgccagtctgcatgctgagccccgac
tgcaggcccagcctgcccttgccgcacttcaacaagcacctgctgggtgcagagcacggg
gacgagccgcgccacgggggcctcacgctgcgcctgggcctccaccagcaggggtcggag
cccagctacctggagcgggtggaacagctgcgcggggtgatgtacagcacgttggagaag
agcgtgctgggtggccaggaccagctgcggatccgcgtggcagagctggaggacgaggtg
cggaacctgcgcaagatcaaccgcgacctctttgacttctccacgcgtatcatcactcga
ccggccaagtga
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