Phocoena phocoena (harbor porpoise): 136121456
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Entry
136121456 CDS
T11058
Symbol
LINGO3
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
pphc Phocoena phocoena (harbor porpoise)
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pphc04131
]
136121456 (LINGO3)
Membrane trafficking [BR:
pphc04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
136121456 (LINGO3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
I-set
LRR_4
Ig_3
LRR_1
ig
Ig_2
V-set
LRR_9
LRRNT
LRR_LRWD1
LRR_6
Sp38
Motif
Other DBs
NCBI-GeneID:
136121456
NCBI-ProteinID:
XP_065731412
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All DBs
Position
3:complement(172074497..172076275)
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AA seq
592 aa
AA seq
DB search
MTCWLCVLSLQFLLLPAAPPPAGGCPARCECTAQMRAVACPRRRLTTVPDGIPAETRLLE
LSRNRIRCLNPGDLAALPLLEELDLSENVIAHVEPGAFANLPRLRELRLRGNLLKLIPPG
VFTHLDNLTLLDLSENKLVILLDYTFQDLRSLRRLEMGDNDLVFISRRAFAGLLALEELT
LERCNLTALSGESLGHLRGLGALRLRHLAIAALEDQNFQRLPGLLHLEIDNWPLLEEVAA
GSLRGLNLTSLSVTHTNITAVPAAALRHQAHLTCLNLSHNPISTVPRGSFRDLVRLRELH
LAGALLAVVEPQAFLGLRQIRLLNLSNNLLSTLEESTFHSVNTLETLRVDGNPLACDCRL
LWIVQRRKTLNFDGRLPACATPAEVRGDALRNLPDSVLFEYFVCRKPKIRERRLQHVTAA
AGDDVRFQCRAEGEPAPTVAWVTPRHRAVTAASAGRARVLPGGTLQIRDARPGDSGTYTC
VASNAGGNDTYFATLSVQPEPAANRTPGEGRNDTQAAARFPLDLTTILVSTAMGCITFLG
VVLFCFLLLFVWSRGRGQHKNNFSVEYSFRKVDGPAAAAGQGGARKFNMKMI
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgacctgctggctgtgtgtcctgagcctgcagttcctgctcctgcccgcggccccgccc
cccgctgggggctgcccggcccgctgcgagtgtacagcgcagatgcgcgcagtagcctgt
ccccggcgccggctgaccacggtgcccgacggcatcccggccgagacgcgcctgctagag
ctcagccgcaaccgcatccgctgcctgaacccgggcgacctggccgccctgccgctgctg
gaggagctggacctgagcgagaacgtgatcgcgcacgtggagcccggcgccttcgccaac
ctgccgcgcttgcgagagctgcgcctccgcggcaacctgctgaagctcatcccgcccggc
gtcttcacgcacctggacaacctcacgctgctggacctgagcgagaacaagctggtcatc
ctcctggactacaccttccaggacctgcgcagcctccgccggctggagatgggcgacaac
gacctggtgttcatctcgcgccgggccttcgcggggctgctggcgcttgaggagctgacc
ctggagcgctgcaacctgacggcgctgtcgggcgagtcgctgggccacctgcggggcctg
ggcgccctgcggctgcggcacctggccatcgccgccctggaggaccagaacttccagcgg
ctcccgggcctgctgcacctggagatcgacaactggcccctgctggaggaggtggccgcc
ggcagcctgagggggctcaacctgacctcgctgtccgtcacgcacaccaacatcaccgcc
gtgccggccgccgccctgcgccaccaggcccacctcacctgcctcaatctctcgcacaac
cccatcagcacggtgccgcgagggtccttccgcgacctggtgcgcctgcgtgagctgcac
ctggccggggccctgctggccgtggtggagccgcaggccttcctggggctgcggcagatc
cgcctgctcaacctctctaacaacctgctgtccacgctggaggagagcaccttccactcg
gtcaacacgctggagacgctgcgcgtggacgggaacccgctggcctgcgactgtcgcctg
ctctggatcgtgcagcgccgcaagaccctcaatttcgacggccgcctgccggcctgcgcc
accccagccgaggtccgcggcgacgcgctgcgcaacctgccggactcggtgctcttcgag
tacttcgtgtgccgcaagcccaagatccgcgagcggcggctgcaacatgtcacggcggcc
gcgggcgacgacgtgcgcttccagtgccgcgccgagggcgagccggcgcccaccgtggcc
tgggtgacgccgcgccaccgcgcggtgaccgccgccagcgctggccgggcgcgcgtgctg
ccgggcggcacgcttcagatccgggacgcgcggccaggggacagcggcacctacacgtgc
gtggccagcaacgcggggggcaacgacacctacttcgccacgctgagcgtgcagcccgag
ccagccgccaaccggaccccgggcgagggccgcaacgacacgcaggcggccgcgcgcttt
cctctggacctcaccaccatcctggtgtctaccgccatgggctgcatcaccttcctgggc
gtcgtcctcttctgcttcctgctgctcttcgtgtggagccgcggccgcgggcagcacaag
aacaacttctcggtggagtactctttccgcaaggtggacgggcccgccgcggctgccggc
caggggggcgcccgcaagttcaacatgaagatgatctga
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