Phocoena phocoena (harbor porpoise): 136121508
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Entry
136121508 CDS
T11058
Symbol
GABRA1
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-1
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
pphc Phocoena phocoena (harbor porpoise)
Pathway
pphc04080
Neuroactive ligand-receptor interaction
pphc04082
Neuroactive ligand signaling
pphc04519
Cadherin signaling
pphc04723
Retrograde endocannabinoid signaling
pphc04727
GABAergic synapse
pphc04742
Taste transduction
pphc05032
Morphine addiction
pphc05033
Nicotine addiction
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
136121508 (GABRA1)
04082 Neuroactive ligand signaling
136121508 (GABRA1)
04519 Cadherin signaling
136121508 (GABRA1)
09150 Organismal Systems
09156 Nervous system
04727 GABAergic synapse
136121508 (GABRA1)
04723 Retrograde endocannabinoid signaling
136121508 (GABRA1)
09157 Sensory system
04742 Taste transduction
136121508 (GABRA1)
09160 Human Diseases
09165 Substance dependence
05032 Morphine addiction
136121508 (GABRA1)
05033 Nicotine addiction
136121508 (GABRA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pphc04040
]
136121508 (GABRA1)
Ion channels [BR:
pphc04040
]
Ligand-gated channels
GABA-A
136121508 (GABRA1)
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GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
136121508
NCBI-ProteinID:
XP_065731467
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All DBs
Position
3:138992479..139053039
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AA seq
456 aa
AA seq
DB search
MKKSPGLSDYIWGWTLLLSTLTGRSYGQPSLQDELKDNTTVFTRILDRLLDGYDNRLRPG
LGERVTEVKTDIFVTSFGPVSDHDMEYTIDVFFRQSWKDERLKFKGPMTVLRLNNLMASK
IWTPDTFFHNGKKSVAHNMTMPNKLLRITEDGTLLYTMRLTVRAECPMHLEDFPMDAHAC
PLKFGSYAYTRAEVVYEWTREPARSVVVAEDGSRLNQYDLLGQTVDSGIVQSSTGEYVVM
TTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISA
RNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRGYAWDGKSVVPEKPKKMKDP
LIKKNNTYAPTATSYTPNLARGDPGLATIAKSATIEPKEVKTETKPPEPKKTFNSVSKID
RLSRIAFPLLFGIFNLVYWATYLNREPQLKAPTPHQ
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaaagtccgggtctctctgactacatttggggctggaccctccttctgagcaca
ttgactggaagaagctatggacaaccctcattacaagatgaacttaaagacaacaccact
gtcttcactaggattttggaccgactcctagatggttatgacaatcgcctgagaccagga
ttgggagagcgtgtaactgaagtgaagactgacatcttcgtcaccagtttcggacccgtt
tcagaccatgatatggaatatacaatagatgtattcttccgtcaaagctggaaggatgaa
aggttaaaatttaaaggacccatgacggtactccggttaaataacctaatggcaagtaaa
atctggactccggatacctttttccacaatggaaagaaatcagtggcacacaacatgacc
atgcccaacaagctcctacggatcacagaggatgggaccttgttgtacaccatgaggctg
acggtgagagctgaatgtccaatgcatttggaggatttccctatggatgcccatgcctgc
ccactaaaatttgggagctatgcttacacgagagcggaagttgtttatgagtggaccaga
gagccggcacgctcagtggttgtagcagaagatgggtcacgcctaaaccagtacgatctt
cttggacaaacagtagactctggaattgttcagtctagcacaggagaatatgttgttatg
accactcatttccacctgaagagaaagattggctattttgttattcaaacatacctgcca
tgcataatgacggttattctctcccaagtctcgttctggctcaacagagagtctgtacca
gcaaggactgtctttggagtaacaactgtgcttaccatgacaactttgagtatcagtgcc
agaaattccctccctaaggtggcttatgcaactgctatggattggtttattgctgtgtgc
tatgcctttgtattctcagctctaattgagtttgccacagtaaactatttcaccaaaaga
ggttatgcatgggatggcaaaagtgtggttccagaaaagccaaagaaaatgaaggatcct
ctcattaagaaaaacaacacttatgctccaacagcaaccagctatacacctaatttggcc
aggggtgaccccggcttagccaccattgctaaaagtgcaaccatagaaccaaaagaagtc
aagacggaaacaaaaccaccagaaccgaagaaaacctttaacagtgtaagcaaaattgac
cgactgtcaagaatagccttcccgctgttattcggaatctttaacttggtctattgggct
acatatttaaacagagagcctcagctaaaagcccctaccccacatcaatag
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