Phocoena phocoena (harbor porpoise): 136121899
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Entry
136121899 CDS
T11058
Symbol
DHX36
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36 isoform X1
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
pphc Phocoena phocoena (harbor porpoise)
Pathway
pphc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
136121899 (DHX36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pphc03019
]
136121899 (DHX36)
03012 Translation factors [BR:
pphc03012
]
136121899 (DHX36)
Enzymes [BR:
pphc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
136121899 (DHX36)
Messenger RNA biogenesis [BR:
pphc03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
136121899 (DHX36)
Translation factors [BR:
pphc03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
136121899 (DHX36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
DEAD
HA2_C
Helicase_C
HA2_N
AAA_22
AAA_19
PhoH
nSTAND3
ATPase
AAA_34
DUF6782
NPHP3_N
RsgA_GTPase
Motif
Other DBs
NCBI-GeneID:
136121899
NCBI-ProteinID:
XP_065731797
LinkDB
All DBs
Position
4:complement(35438014..35487131)
Genome browser
AA seq
1017 aa
AA seq
DB search
MSYDYHQNWGRDGGGRDGGSRSSGGGYGGSYGGGHGGNRGSGGGGGGGGGGGGGGGRGGR
GRHPGHLKGREIGLWYAKKQGQKNKEAERQERAVVHMDERREEQIVQLLHSVQAKNDKDS
EAQISWFAPEDHRYGTDAPAENKPNSVKKVEDQEKKLINQEKRPFRIREKYIDRDSEYLL
QENEPDVTLDQQLLEDLQKKKTDLRYIEMQHFREKLPSYGMQKELVNMIDNHQVTVVSGE
TGCGKTTQVTQFILDNYIERGKGSACRIVCTQPRRISAISVAERVAAERAESCGNGNSTG
YQIRLQSRLPRKQGSILYCTTGIILQWLQSDPHLSSVSHIVLDEIHERNLQSDVLMTVVK
DLLNYRPDLKIVLMSATLNAEKFSEYFGNCPMIHIPGFTFPVVEYLLEDIIEKTRYVPEQ
KEHRSQFKRGFMQGHVNRQEKEEKEAIYKERWPGYVRELRKRYSPSTIDVIGMMDDDKVD
LNLIAALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFKSDRFLIIPLHSLMPTV
NQTQVFKRTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWV
SKANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELCLQIKILRLGGI
AYFLSRLMDPPSNEAVLLSIKHLMELNALDKQEELTPLGVHLARLPVEPHIGKMILFGAL
FCCLDPVLTIAASLSFRDPFVIPLGKEKVADARRKELAKDTKSDHLTVVNAFEGWEEARQ
RGFRYEKDYCWEYFLSSNTLQMLHNMKGQFAEHLLGAGFVSSRNPKDPKSNINSDNEKII
KAVICAGLYPKVAKIRLNLGKKRKMVKVYTKTDGLVAIHPKSVNVEQTEFHYNWLIYHLK
MRTSSIYLYDCTEVSPYCLLFFGGDISIQKDNDQETIAVDEWIIFQSPARIAHLVKELRK
ELDILLQEKIESPHPVDWKDTKSRDCAVLSAIIDLLKTQEKATPRNLPPRFQDGYYS
NT seq
3054 nt
NT seq
+upstream
nt +downstream
nt
atgagctatgactaccatcagaactggggccgcgatggcgggggccgcgatggcgggtcc
cgcagctccggcgggggttacggaggaagctatggagggggccacggagggaatcgaggc
tccggaggtggcggcggcggcggcggcggcggaggaggagggggtggtcgaggcggccga
ggccgacatcccgggcacctgaaaggccgcgaaatcggcttgtggtacgcgaagaaacaa
ggccagaagaacaaggaagcggagaggcaggagagagctgtggtacatatggatgaacgt
cgagaagaacaaattgtgcagctgctgcattctgtgcaggctaagaatgataaagattcg
gaagcacagatatcctggtttgctcctgaagatcacagatatgggactgatgctcctgct
gagaacaaaccaaactcagtaaagaaagttgaggatcaggaaaaaaaattgataaatcaa
gaaaagaggccatttagaatcagggagaaatatattgaccgcgattctgaatatctcttg
caagaaaatgaaccagatgtaactttagaccaacaattattggaagatttacaaaagaaa
aaaactgaccttcggtatattgaaatgcagcatttcagggaaaagctgccttcatatgga
atgcaaaaggaattggtaaatatgatcgataaccatcaggtaacagtagtaagtggtgaa
actggttgtggaaaaaccactcaagttactcagttcattttggataactacattgaaaga
ggaaaaggatctgcatgcaggatagtttgtactcagccaagaagaattagtgccatttca
gttgcagagagagtggctgcagaaagggcagaatcttgtggcaatggtaatagtaccgga
taccaaattcgtctccagagtcggttgccaaggaaacagggttctatcttatattgtacg
acaggaattatccttcagtggcttcagtcagacccgcatttgtccagtgttagtcatatc
gtgcttgatgaaatccatgagagaaatctacagtcagatgttttaatgactgttgttaaa
gatcttctcaattatcgacctgacctgaaaatagttttgatgagtgcaacattgaatgct
gagaaattttcagaatattttggtaactgtccaatgatacatatacctggttttactttt
ccggttgtggagtatcttttggaagatataattgaaaaaacaagatatgttccagaacaa
aaagaacacagatcccagtttaagaggggtttcatgcaagggcatgtaaatagacaagaa
aaagaagaaaaagaagcaatctataaagaacgctggccaggttatgtaagggaattgcga
aaaaggtattctccaagcactatagatgttataggaatgatggatgatgataaagttgat
ctgaatttgattgctgcccttattcgatacattgttttggaagaagaggatggtgcaata
ttggtctttctaccaggttgggacaatatcagtactttacatgatctcttgatgtcacaa
gtgatgtttaaatcagacaggtttcttattatacccttacattcactgatgcctacagtt
aaccagacacaggtatttaaaagaacccctcctggtgttcggaaaatagtaattgctacc
aacattgcagagactagcattaccatagatgatgtagtttatgtaatagatggaggaaaa
ataaaggagacacactttgacacacagaacaacatcagtacaatgtctgctgagtgggtt
agtaaagctaatgctaaacaaaggaaaggtcgagctggaagagttcaacctggtcattgc
tatcatctgtataatggtcttagagcaagccttctagatgactatcaactgccagaaatt
ttgagaacgcctttggaagaactttgtttacaaataaagattttaaggctaggtggaatt
gcttactttctgagtaggctaatggatccaccatcgaatgaagcagtgttactttccata
aaacacctgatggaactgaacgctttggataaacaagaagaattgacacctcttggagtc
cacttagcacgattaccagttgagccacacattggaaaaatgattctttttggagctctg
ttctgttgcctcgacccggtgctcaccattgctgctagtcttagcttcagagatcccttt
gtgattccactgggaaaagaaaaggtcgcagatgcaagaagaaaggaattggcaaaggat
actaaaagtgatcacctgacagttgtgaatgcatttgagggctgggaagaagctagacaa
cgtggtttcagatatgaaaaagactattgctgggaatattttctgtcttcaaacacactg
cagatgctgcataacatgaaagggcagtttgctgagcatcttcttggagctggatttgta
agcagtaggaatcctaaagatccaaaatctaatataaattcagataatgagaagataatt
aaagctgtcatctgtgctggtttatatcccaaagttgctaaaatccgactaaatttgggt
aaaaaaagaaaaatggtgaaagtttacacaaaaactgatggactagttgctattcatccc
aaatccgttaatgtggagcaaacagaatttcattacaactggcttatctatcacctgaag
atgagaacaagtagtatatacttgtatgactgcacagaagtttctccatactgtctcttg
ttctttggaggtgatatttccattcagaaggataatgatcaggaaactattgctgtagat
gaatggattatctttcagtctccagcaagaattgcccatcttgttaaggaattacgaaag
gaactagatatccttctgcaagagaagattgaaagtccccatcctgtagactggaaggac
actaaatccagagactgtgcagtactctcagctattatagacttgctcaaaacacaggaa
aaagcaactcccaggaacttgccaccacgatttcaggatggatattacagctga
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