Phocoena phocoena (harbor porpoise): 136121948
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Entry
136121948 CDS
T11058
Symbol
MED12L
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 12-like protein
KO
K15162
mediator of RNA polymerase II transcription subunit 12
Organism
pphc Phocoena phocoena (harbor porpoise)
Pathway
pphc04919
Thyroid hormone signaling pathway
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09150 Organismal Systems
09152 Endocrine system
04919 Thyroid hormone signaling pathway
136121948 (MED12L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pphc03021
]
136121948 (MED12L)
Transcription machinery [BR:
pphc03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
136121948 (MED12L)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Med12-LCEWAV
Med12-PQL
Med12
Peptidase_M17_N
Motif
Other DBs
NCBI-GeneID:
136121948
NCBI-ProteinID:
XP_065731878
LinkDB
All DBs
Position
4:32535452..32843723
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AA seq
2138 aa
AA seq
DB search
MAAFGLLSYEQRPLKRPRLGPPDVYPQDPKQKEDELTAVNVKQGFNNQPAFTGDEHGSAR
NIVINPSKIGAYFSSILAEKLKLNTFQDTGKKKPQVNAKDNYWLVTARSQSAIHSWFSDL
AGNKPLAILAKKVPILSKKEDVFAYLAKYSVPMVRATWLIKMTCAYYSAISEAKIKKRQA
TDPNLEWTQISTRYLREQLAKISDFYHLASSAGDGPVPVPPDVEQAMRQWEYNEKLAFHM
FQEGMLEKHEYLTWILDVLEKIRPMDDDLLKLLLPLMLQYSDEFVQSAYLSRRLAYFCAR
RLALLLSDGPNLLAAHSPHMMVGPNSSGIGAPSPGPPGPGMSPVQLAFSDFLSCAQHGPL
VYGLSCMLQTVTLCCPSALVWNYSTNDNKSANPGSPLDLLQVAPSSLPMPGGNTAFNQQV
RARIYEVEQQIKQRGRAVEVRWSFDKCQESTAGVTISRVLHTLEVLDRHCFDRTDSSNSM
ETLYHKIFWANQNKDNQEAAPSDEAVVTLLCEWAVSCKRSGKHRAMAVAKLLEKRQAEIE
AERCGESEVLDEKESISSASLAGSSLPVFQNVLLRFLDTQAPSLSDPNSECEKVEFVNLV
LLFCEFIRHDVFSHDAYMCTLISRGDLSISASTRPRSPAGENADEHYAKDHDVKMEEQTI
MAHMGIDSGTTNIFDEVDKSDFKTDFGSEFPIFSPVPGESCENANPSLGRRMPVNGEKLL
KREKPRELIFPSNYDLLRHLQYATHFPIPLDESSSHEYNQRTILLYGVGKEREEARHQLK
KITKDILKILNKKSTTETGVGDEGQKARKSKQEAFPTLETVFTKLQLLSYFDQHQVTSQI
SNNVLEQITSFASGTSYHLPLAHHIQLIFDLMEPALNINGLIDFAIQLLNELSVVEAELL
LKSSSLAGSYTTGLCVCIVAVLRRYHSCLILNPDQTAQVFEGLCGVVKHVVNPSECSSPE
RCILAYLYDLYVSCSHLRSKFGDLFSSACSKVKQTIYNNVIPANSNLRWDPDFMMDFIEN
PSARSINYSMLGKILSDNAANRYSFVCNTLMNVCMGHQDAGRINDIANFSSELTACCTVL
SSEWLGVLKALCCSSNHVWGFNDVLCTVDVSDLSFHDSLATFIAILIARQCFSLEDVVQH
VALPSLLAAACGDADAEPGARMTCRLLLHLFRAPQACLLPQATGKPFPGIRSSCDRHLLA
AAHNSIEVGAVFAVLKAIMMLGDAKIGSNNVGSLKNDDFTVRGLRRDGSADDIWTASQNS
KSCGKSISIETANLREYARYVLRTICQQEWVGEHCLKEPERLCTDKELILDPVLSNMQAQ
KLLQLICYPHGIKECTEGDNLQRQHIKRILQNLEQWTLRQSWLELQLMIKQCLKDPGSGS
VAEMNSLLDNIAKATIEVFQQSADLNNNSSNSGMGLFNPNGIGSTDTSSTRQNGIKTFLS
SSERRGVWLVAPLIARLPTSVQGRVLKAAGEELEKGQHLGSSSKKERDRQKQKSMSLLSQ
QPFLSLVLTCLKGQDEQREGLLTSLQNQVNQILSNWREERYQDDIKARQMMHEALQLRLN
LVGGMFDTVQRSTQWTTDWALLLLQIITSGTVDMHTNNELFTTVLDMLGVLINGTLASDL
SNASPGGSEENKRAYMNLVKKLKKELGDKRSESIDKVRQLLPLPKQTCDVITCEPMGSLI
DTKGNKIAGFDSIDKKQGLQVSTKQKVSPWDLFEGQKNPAPLSWAWFGTVRVDRKVIKYE
EQHHLLLYHTHPMPKPRSYYLEPLPLPPEEEEEGPTSPISQEPERKSAELSDQGKTTTDE
EKKTKGRKRKTKSSSRVDEYPQSNMYRVPPNYSPVSSQMMHHPQSTLWGYNLVGQPQQPG
LFLQSQALTPGGSRLDPAGSFVPTNTKQALSNMLQRRSGAVMQPPSLHAITSQQQLIQMK
LLQQQQQQRLLRQAQTRPFQQGQPGDQAALFAAQARPSPQLPQYPGLQQAQTMPQGYTMY
GTQMPLQQTPQQQAGSVVLSPTYNSRTYPAAHSNPALMERLRQMQQQPPSGYVQQQASPY
LQPLSGSQRLNHQSLQQSPLVGGGLDAVLTSVHPNLPSVSLSQDPVRPRQPQVRQQQRLL
QMQQPQQSSQPQGQTLGLQTMQPQQPLLCKSNFEMLYA
NT seq
6417 nt
NT seq
+upstream
nt +downstream
nt
atggccgccttcgggcttctcagctatgagcagagaccgctgaaacgcccccggctcggg
ccgccggacgtctacccgcaggaccccaagcagaaggaggatgaacttaccgctgtgaat
gtaaagcaaggcttcaacaatcagcccgcctttactggagacgagcatggctcggctaga
aatattgtaattaacccgtcaaagattggagcttattttagcagcatattagctgagaaa
ctaaagcttaacactttccaggacaccggaaagaagaaaccacaagttaatgctaaagat
aattattggctggttactgctcgatcccagagtgcgattcatagttggttctctgactta
gcaggaaataaaccacttgctattttggcaaaaaaggttcccatccttagtaaaaaagaa
gatgtttttgcatatttagctaagtattccgtgccaatggttcgagcaacgtggctgatc
aagatgacttgtgcctattattctgctatttctgaagcgaaaattaagaaacgtcaggct
actgatcccaatttggagtggacacaaatatctaccaggtatcttcgagagcagttggcc
aagatttccgacttttaccacctagcttccagcgcaggcgatggccctgtccctgtgcca
cccgacgtggaacaagcaatgaggcagtgggagtacaacgaaaagttggcattccacatg
ttccaggaaggaatgctagaaaaacacgaatatttgacatggatcttggatgtgttagaa
aagatcagaccaatggatgatgatcttcttaaactcttattaccactaatgctgcagtat
tcagatgagtttgtccagtcggcctacctgtcccgccgccttgcctacttctgtgcccgg
cgtctcgcgttgctgcttagtgatggccccaacctccttgccgcccactcgccccacatg
atggtaggaccaaacagctcgggcatcggggcccccagtcccggcccccccggccccggc
atgagccccgtgcagctggccttctccgactttctctcctgtgcacagcacggccccctg
gtttatggacttagttgtatgttgcagactgttactctctgttgcccaagtgccttggtg
tggaactactccacaaatgacaataagagcgcgaacccgggctcacccctggatctgctg
caggtggccccctccagcctccccatgccgggcgggaacacggccttcaaccagcaggtt
cgggccaggatttatgaggtagaacagcagatcaaacaaagaggccgtgcagtggaagtt
cggtggtcttttgacaagtgccaagagtcaacagcaggggtgaccattagtcgggttttg
cacacgttggaggtgttggatcgacactgctttgaccgaactgattccagcaattcaatg
gagacactttatcataagattttctgggcaaaccaaaacaaagataaccaagaggctgcc
cccagcgatgaagctgtggtgacgctgctgtgcgaatgggccgtgagctgtaagagatca
ggcaagcacagggccatggctgtggcaaagctcttggagaagaggcaagcggagatcgag
gcagagagatgtggtgaatcagaggtcttagatgagaaggagtccatttcttcagcctct
cttgctggatctagtttgcctgttttccagaatgttctgctaaggtttttggatacacag
gccccctcgttgtcggatccaaacagtgaatgtgagaaggtggaatttgtgaatctggtg
ctgctcttctgtgagttcatccggcacgacgtcttctcccatgatgcctacatgtgcacc
ctcatctctcgaggagacctgtccatcagcgcctccactcggccccggtcgccagcagga
gagaatgcagacgagcactatgcaaaggaccatgacgtgaagatggaggaacagactatt
atggcgcatatgggcattgactcaggaactactaatatttttgatgaagtagacaagagt
gactttaaaactgactttggttcggaatttccaattttttctcccgtgcctggagagtcc
tgtgagaatgctaacccttccctgggcagaagaatgccagttaacggtgagaagctgttg
aagagagaaaaaccaagggagttaatttttccgtctaattatgacctcctacgacatctg
cagtatgcaacccattttcccatacctctggatgaatcttcaagtcatgagtataaccag
cgcacaatccttctttatggagtgggcaaagagcgtgaagaagcgaggcatcagttgaag
aaaattaccaaagatattttgaaaatcctaaataagaagagcaccacagagaccggggtt
ggagatgaaggacagaaagccaggaagagcaaacaggaggcatttccaacactggagact
gtgttcacaaaacttcaactcctttcatattttgaccaacatcaagtgacatctcagatc
tctaacaatgtgctggaacaaatcacaagctttgcatcaggaacatcgtaccatctccca
ctggctcaccatattcagctcatctttgatctcatggagccagcgctgaatatcaatggc
ctcattgactttgcaatacagctcctgaatgaactgagtgttgtggaagccgaactgctc
ctgaaatcctccagcctggcaggaagttacacaacgggactgtgtgtctgcatcgtggcc
gttctcaggagataccacagttgtctgatcctgaatcccgatcagacggcccaggtgttt
gaaggattgtgtggtgtggtaaagcatgtggtgaacccctcagaatgttcttccccagaa
agatgcatcttagcctacctctacgatctctatgtgtcatgtagccacctcagaagtaaa
ttcggagacctcttcagtagtgcctgttcaaaagtaaagcaaaccatatataataatgtg
attcctgcaaattctaacttgcgatgggatccagacttcatgatggattttattgagaat
ccctcagcccgtagcatcaactactcaatgctgggcaagatccttagtgacaatgcggcc
aatcgctacagcttcgtctgcaacacactcatgaatgtatgtatgggccatcaggatgct
ggaaggattaatgacatagccaatttctcctctgagctgacggcctgctgcaccgttctc
agttcagaatggctgggagtcctgaaggctctttgttgttcttcaaaccacgtctggggg
tttaatgatgtactttgcactgtagatgtgagtgacctttcattccatgattcattagct
actttcattgctattctgatagcacgacagtgtttctccctggaggacgtcgtgcagcac
gtcgctcttccctctctcctagccgcagcttgtggagatgcagacgcggagcctggggcg
agaatgacatgccgactcctacttcatctcttccgagctccccaggcctgcctattacct
caggcaaccggcaaacctttccccggaataagatcgtcctgtgatagacacctcttagcc
gctgctcacaacagcattgaagtgggagcggtgtttgctgtcttaaaagcaattatgatg
cttggagatgccaaaattggcagtaacaatgtcggctctttaaagaatgacgacttcacc
gtgaggggtttacgacgtgacggaagtgctgatgatatctggactgcctcacaaaattca
aaatcctgtgggaaaagcatctccatagaaactgccaatttaagggaatatgccagatat
gtactgaggactatctgtcaacaggaatgggtaggagagcattgcttaaaagaacctgaa
agattatgcacagacaaagaacttattttggaccctgtgctctcaaatatgcaagcacag
aaattattgcaactgatctgttatcctcatggcattaaagaatgtacagagggggacaac
ctacaaagacagcacattaaacgcattcttcagaatcttgagcagtggaccctgaggcag
tcctggctggaacttcagttaatgatcaaacagtgcttgaaggaccctggctctggttcg
gtggccgaaatgaacagcctactggacaatattgccaaggcaacaatagaggtattccag
cagtcggccgacctgaacaataactcttctaattcgggtatgggcctcttcaacccaaac
gggattggaagtaccgatacgagtagcacaagacagaatggaataaagacatttctaagt
tcctctgaacgcaggggcgtgtggctggtagcccccctaattgctaggctgccgacttct
gtgcagggaagagtgttgaaagctgctggggaggagctggagaagggacagcacttgggt
tcttcttcaaaaaaggaaagagacagacaaaaacagaaaagtatgtctcttttgagtcag
caaccattcctctccctggtccttacctgccttaagggacaagatgaacaacgagaaggc
ctcctaacatctctgcagaatcaagttaaccagattttaagtaattggagagaagaacgg
taccaggatgacataaaagcacgacagatgatgcacgaggcattgcagctccgcctaaat
ttggtgggaggaatgtttgacacagtgcagagaagcacccagtggacgacagattgggcc
cttcttctccttcagatcattacttctggaaccgtcgacatgcacactaacaatgaatta
ttcacaacagtgcttgacatgctgggtgttttaatcaatggaacattggcctctgaccta
tcaaacgcatccccagggggatctgaagagaacaaacgcgcatacatgaacttagtaaag
aaactgaaaaaagagctgggagacaagcggtcagaaagtattgacaaagttcgacagttg
ctacctttgccaaaacagacatgtgacgtcatcacttgtgaacctatgggctccttgatt
gacacaaaaggaaacaaaattgctggattcgactcaatagacaaaaaacagggtctccag
gtctccacgaagcagaaggtgtccccgtgggatttgtttgagggtcagaagaacccagct
cctctgtcctgggcctggtttgggactgtccgcgtggaccggaaggtcatcaagtacgag
gaacagcatcacctcctcctgtatcacacacaccccatgcccaagccccgaagttactac
ctcgagccgctgcccctgccccctgaggaggaagaggaagggcctacatctcccatctct
caggaaccggagaggaaatcagctgagctgtcagatcaaggaaaaaccacaacagatgaa
gagaagaagacaaagggaaggaagcgcaagacgaaatccagctcgagagttgatgagtat
ccacagagcaacatgtaccgagtgcctcccaactactcacccgtctcctcccagatgatg
catcacccacagtccaccttgtggggctacaacctcgtgggtcagccccagcagcccggc
cttttccttcagagccaggctctcactccaggtggctccaggttggaccccgcgggctcc
tttgtccccaccaataccaagcaagctctgtccaacatgctgcagcggcgctcgggggcc
gtgatgcagccgccctcccttcacgccatcacgtcgcagcagcagttgatacagatgaag
cttctgcagcagcagcagcagcagcggctcctcaggcaagcccagacgcgacctttccaa
cagggccagccgggggaccaggctgctctctttgctgctcaagcacggccctcccctcag
ctcccccagtatccaggtctgcagcaagcacagaccatgccccagggctatacgatgtac
ggaacgcagatgcctttgcagcagacccctcagcagcaggctggcagcgtggtcctgtct
cctacctataattccagaacctatccggctgcgcattccaacccggcgctaatggaaaga
ctcagacagatgcagcagcagccgccgagtggctacgttcagcagcaggcgtcgccgtac
ctgcagcccctgagtggctctcagagactgaatcatcagtcgcttcagcagagccctctg
gtgggtggaggactggatgcggtgctgacttccgtgcatccaaaccttccctcggtgtcc
ctgtctcaggacccagtgaggcccagacagccacaggtgcgacagcagcagaggctcctc
cagatgcagcagccccagcagtcctcgcagccccagggtcagaccctcggtctccaaacc
atgcagcctcagcagcctctgctttgtaagtcaaatttcgaaatgttatatgcatag
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