Phocoena phocoena (harbor porpoise): 136121979
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Entry
136121979 CDS
T11058
Symbol
VPS45
Name
(RefSeq) vacuolar protein sorting-associated protein 45
KO
K12479
vacuolar protein sorting-associated protein 45
Organism
pphc Phocoena phocoena (harbor porpoise)
Pathway
pphc04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
136121979 (VPS45)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pphc04131
]
136121979 (VPS45)
Membrane trafficking [BR:
pphc04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
136121979 (VPS45)
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Gene cluster
GFIT
Motif
Pfam:
Sec1
Motif
Other DBs
NCBI-GeneID:
136121979
NCBI-ProteinID:
XP_065731897
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Position
1:108500340..108568670
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AA seq
570 aa
AA seq
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MNVVFAVKQYISKMIEDSGPGMKVLLMDKETTGIVSMVYTQSEILQKEVYLFERIDSQNR
EIMKHLKAICFLRPTKENVDYLIQELRRPKYSIYFIYFSNVISKSDVKSLAEADEQEVVA
EVQEFYGDYIAVNPHLFSLNILGCCQGRNWDPVQLSRATQGLTALLLSLKKCPMIRYQLS
SETAKRLAECVKQVITKEYELFEFRRTEVPPLLLILDRCDDAITPLLNQWTYQAMVHELL
GINNNRIDLSRVPGISKDLREVVLSAENDEFYANNMYLNFAEIGSNIKNLMEDFQKKKPK
EQQKLESIADMKAFVENYPQFKKMSGTVSKHVTVVGELSRLVSERNLLEVSEVEQELACQ
NDHSSALQNVKRLLQNPKVTEFDAARLVMLYALHYERHSSNSLPGLMMDLRNKGVSEKYR
KLVSTVVEYGGKRIRGSDLFSPKDAVAITKQFLKGLKGVENVYTQHQPFLHETLDHLIKG
KLKENLYPYLGPSTLRDRPQDIIVFIIGGATYEEALTVYNLNRTTPGVRIVLGGTTVHNT
KSFLEEVLASGLHSRSKDSSQVTSRLASRR
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtggtttttgctgtgaagcagtacatttccaaaatgatagaggacagcggaccg
ggcatgaaagtacttctcatggataaagagacgaccggcatagtgagtatggtatacaca
caatcggaaattctccagaaggaagtgtacctttttgaacgcattgattctcaaaatcga
gagatcatgaaacacctgaaagcaatttgttttcttcgacctacaaaggagaatgtggat
tatctgattcaggagctccgaagacccaaatacagtatatattttatttatttcagtaat
gtgatcagcaagagtgatgtgaagtcattagctgaagctgatgaacaggaagtggtggct
gaggttcaggaattttatggtgattacattgctgtgaatccacatttgttttccctcaat
attctgggttgctgccagggtcgaaattgggatccagtccaactatccagagcaactcaa
ggcctgacagctctccttttatctctgaagaaatgtcccatgattcgttaccagctttca
tcagagacagcaaagagacttgcagaatgtgttaagcaggtgataactaaagaatatgaa
ctgtttgaattccggcggactgaggttcctccattgctacttattttagatcgctgcgat
gatgccatcaccccattgctaaaccagtggacatatcaggccatggtccatgaactactg
ggcataaacaacaatcggattgatctttccagagtgccagggatcagtaaagacttgaga
gaggtggtcctatctgctgaaaatgatgaattctacgctaataatatgtacctgaacttt
gctgagattggtagcaacataaagaatctcatggaagactttcagaagaagaaaccaaaa
gaacagcaaaaactagaatcaatagcagacatgaaggcctttgtggagaattacccacaa
ttcaagaagatgtctgggactgtatcaaagcacgtgacagtggttggagagctgtctcgg
ttggtcagtgagcggaatctgctggaggtttcggaggttgagcaagaactggcctgtcaa
aatgaccattctagtgctctccagaatgtaaagaggctcctgcagaaccccaaagtgaca
gagtttgatgccgcgcgcctggtgatgctttatgctctacattatgagcgacacagcagc
aacagcctaccaggattaatgatggaccttagaaataaaggtgtttctgagaagtatcga
aagcttgtgtctacagttgttgaatatggtggtaaacggatcagaggaagtgacctcttc
agccccaaagatgctgtggctattaccaaacagttcctcaaaggattgaagggagtagaa
aatgtatatactcagcatcagcctttcttacatgagaccctggaccatctcatcaaagga
aagctcaaggaaaacctgtatccttatctaggccccagcacactcagagacagacctcag
gatatcattgtgtttataattggaggagccacctatgaagaggctctaacagtttataac
ctgaaccgtaccactcctggagtgaggattgtcctggggggaaccactgtgcataacacg
aaaagtttcctagaggaagttctggcttctggactgcacagccgaagcaaggacagctct
caagttacatcaaggttagcaagcagaagatga
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