Phocoena phocoena (harbor porpoise): 136122206
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Entry
136122206 CDS
T11058
Symbol
LSS
Name
(RefSeq) lanosterol synthase isoform X1
KO
K01852
lanosterol synthase [EC:
5.4.99.7
]
Organism
pphc Phocoena phocoena (harbor porpoise)
Pathway
pphc00100
Steroid biosynthesis
pphc01100
Metabolic pathways
Module
pphc_M00101
Cholesterol biosynthesis, FPP => cholesterol
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
136122206 (LSS)
Enzymes [BR:
pphc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.7 lanosterol synthase
136122206 (LSS)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SQHop_cyclase_C
SQHop_cyclase_N
Prenyltrans
Motif
Other DBs
NCBI-GeneID:
136122206
NCBI-ProteinID:
XP_065732158
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Position
4:complement(146269448..146309380)
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AA seq
733 aa
AA seq
DB search
MTEGTCLRRRGGPYKTEPATDLSRWRLSNERGRQTWTYFQGEDDPGRGQSGLEAHLLGLD
TRSHFKDLPKAHTAREGALNGMTFYTALQAEDGHWAGDYGGPLFLLPGLLITCYVAHIPL
PAGYREEITRYLRSVQLPDGGWGLHIEDKSTVFGTALNYVSLRILGVGPDDPDLVRARNI
LHKKGGAVFIPSWGKFWLAVLNVYSWEGLNTLFPEMWLFPDWMPAHPSTIWCHCRQVYLP
MAYCYGIRLSAEEDPLVQSLRQELYVEDYGRIDWPAHRDSVAPDELYTPHSWLLHVVYAI
LNLYERHHSAGLRQRAIQKLYEHIAADDRFTKYLSIGPISKTINMLACWHREGPASSAFQ
GHLSRIPDYLWLGLDGMKVQGTNGSQIWDTAFAIQALLEAGAQHRPEFSSCLQKAHEYLR
VSQVPDNLPDYQKYYRQMSKGGFSFSTLDCGWIVADCTAEALKSLLLLQEKCPFVTKHVP
RERLFDAVAVLLSMRNPDGGFATYETKRGGHLLELLNPSEIFGDIMIDYTYVECTSAVMQ
ALKHFHKQFPDHRAGEIRETLERGLQFCRQKQRPDGSWEGSWGVCFTYGTYFGLEAFACM
GHTYRDGTACAEVSQACDFLLSRQMADGGWGEDFESCEQRRYVQSARSQIHNTCWALMGL
MAVRHPDVAALERGVSYLLGKQLPNGDWPQDNIAGVFNKSCAISYTSYRNIFPIWALGRF
SRLHPESALAGHP
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgacggagggcacgtgtctgcgccgaagagggggaccctataagacagagcccgccacc
gacctcagccgctggcgtctcagcaatgagagggggaggcagacgtggacatacttccaa
ggagaagacgaccctgggcgagggcagtctggcctggaagctcacttactgggcttggac
accaggagtcactttaaggacttgccgaaagcccacacagcccgtgagggggctctcaac
gggatgacgttctacactgcactgcaggctgaggatggccactgggcgggtgattacggt
ggcccgctcttcctcctgccaggcctcctgatcacgtgctacgtggcacacattcctctg
ccggctggatacagagaagagattacgcggtacctgcggtctgtgcagcttcctgatggc
ggctggggcctgcacattgaggataagtccacggtgtttgggactgcgctcaactatgtg
tctttgagaattctgggtgtggggcctgacgatcctgacctggtgcgagcccggaatatt
cttcacaagaaaggtggtgctgtgttcatcccctcctgggggaagttctggttggctgtc
ctgaacgtgtacagctgggaaggcctcaacactctgttcccagaaatgtggctgtttcct
gactggatgcccgcgcatccctccaccatctggtgccactgccggcaggtgtacctgccc
atggcctactgctatggcatccggctgagcgctgaggaggacccgctggtccagagcctc
cgccaggagctctacgtggaggactacggccgcatcgactggccggcgcacagggacagc
gtggcccccgatgagctgtacacgccgcacagttggctgctccacgtggtgtatgccatc
ctcaacctgtacgagcgccaccacagcgccggcctgcggcagcgggccatccagaagctg
tatgagcacatcgcagccgatgaccgcttcaccaagtacctcagcatcggcccgatctcg
aaaaccatcaacatgcttgcgtgctggcacagggaggggccggcctcctctgccttccag
gggcacttgtctaggattcccgattacctctggctgggcctcgacggcatgaaagtgcag
ggtaccaatggctcgcagatctgggacaccgcgttcgccatccaggctctgctggaggcg
ggtgcacagcacaggccagagttttcgtcctgcctgcagaaggctcatgagtatctccgg
gtctcgcaggtcccagacaacctccccgactaccagaagtactaccgccagatgagcaag
ggcggcttctccttcagtacactggactgtggctggattgttgccgactgcacagctgag
gccttgaagtccctccttctcctgcaggaaaagtgtccctttgtcaccaagcatgtccca
cgagagcggctcttcgatgctgtcgctgtgctgctgagcatgaggaaccctgacggaggg
tttgccacctacgagaccaagcgtgggggacaccttctggagcttctgaacccctcggag
atcttcggggacatcatgattgactacacatatgtggagtgcacctcggctgtgatgcag
gcgctgaagcatttccacaagcagttcccagaccacagggccggagagatcagggagacc
ctcgagcggggactgcagttctgtcggcagaagcagaggcctgatggctcctgggaaggc
tcctggggggtgtgcttcacctacggcacctactttgggctggaagccttcgcctgcatg
gggcacacttaccgcgatgggactgcctgtgcagaggtctcccaggcctgcgacttcctg
ctgtcccgacagatggcagatggaggctggggggaggacttcgagtcctgtgagcagcgg
cgctacgtgcagagcgcccggtcccagatccacaacacgtgctgggccctgatggggctg
atggccgtcaggcaccctgacgtagcggccctggagagaggagtcagctacctgcttgga
aagcagctgcccaatggcgactggccccaggacaacatcgctggggtcttcaacaagtcc
tgtgccatcagctacacgagctacagaaacatcttccccatctgggcccttgggcgcttc
tcccgcctgcaccccgagagcgccctcgccggccacccttga
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